RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 ROCK1Q13464 1354 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 C3orf85A0A1B0GTC6 90 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 A0A1W2PRS3 328 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 CDC42EP2O14613 210 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 LY6G6CO95867 125 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 IFNA4P05014 189 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 BCL2P10415 239 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 VBP1P61758 197 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 NEDD8Q15843 81 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 KRTAP21-1Q3LI58 79 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 Q86TA4 180 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 OR5H6Q8NGV6 325 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 CCDC115Q96NT0 180 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 CCL19Q99731 98 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 EFCAB11Q9BUY7 163 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 CST11Q9H112 138 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 C10orf95Q9H7T3 257 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 CBLN4Q9NTU7 201 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 NDUFAF1Q9Y375 327 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 APCP25054 2843 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 ZFC3H1O60293 1989 aaKnown RBP0.21□□□□□ -2.38
TOP2A-202ENST00000577541 KIAA1107Q9UPP5 1409 aa0.21□□□□□ -2.38
TOP2A-202ENST00000577541 NUP210Q8TEM1 1887 aaPredicted RBP0.2□□□□□ -2.38
TOP2A-202ENST00000577541 NBDYA0A0U1RRE5 68 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 H3BQV1 296 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 IGHV3-33P01772 117 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 PRH1P02810 166 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 PDE6GP18545 87 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 SDC2P34741 201 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 MAXP61244 160 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 QRFPP83859 136 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 CIRBPQ14011 172 aaKnown RBP0.2□□□□□ -2.38
TOP2A-202ENST00000577541 SPATA45Q537H7 98 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 LINC00575Q6W349 94 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 LINC00305Q7Z4B0 112 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 MORN4Q8NDC4 146 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 OR51A4Q8NGJ6 313 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 OR10AG1Q8NH19 301 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 BRK1Q8WUW1 75 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 PRELID3AQ96N28 172 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 TPRKBQ9Y3C4 175 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 MED12Q93074 2177 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 WDR97A6NE52 1622 aa0.2□□□□□ -2.38
TOP2A-202ENST00000577541 CHD3Q12873 2000 aaKnown RBP0.2□□□□□ -2.38
TOP2A-202ENST00000577541 PTPRDP23468 1912 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 ZGRF1Q86YA3 2104 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 LOC107984156A0A0G2JMH3 177 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 TRBV7-6A0A0J9YX20 115 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 TRBV27A0A0K0K1C4 114 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 A0A1B0GV72 72 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 A0A1B0GW64 132 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 PRORSD1PA6NEY8 169 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 ZNF727A8MUV8 499 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 H0YJX3 145 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 IGKCP01834 107 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 TFF1P04155 84 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 SLC25A4P12235 298 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 CRYGSP22914 178 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 B2MP61769 119 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 ASB16-AS1Q495Z4 193 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 CASC2Q6XLA1 102 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 ARL17AQ8IVW1 177 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 FAM103A1Q9BTL3 118 aaKnown RBP0.19□□□□□ -2.38
TOP2A-202ENST00000577541 COMMD3Q9UBI1 195 aa0.19□□□□□ -2.38
TOP2A-202ENST00000577541 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.18□□□□□ -2.38
TOP2A-202ENST00000577541 FER1L6Q2WGJ9 1857 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 DSPPQ9NZW4 1301 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 ZCCHC11Q5TAX3 1644 aaKnown RBP0.18□□□□□ -2.38
TOP2A-202ENST00000577541 A0A096LPI6 279 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 IGLV3-32A0A0A0MS00 114 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 TRAV13-1A0A0B4J241 112 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 A0A0J9YY99 117 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 LOC101927531A0A1B0GV80 90 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 A6NN06 94 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 LYRM1O43325 122 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 IFNA21P01568 189 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 TRACP01848 142 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 SPINT3P49223 89 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 BLCAPP62952 87 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 TMEM128Q5BJH2 165 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 ZNF431Q8TF32 576 aaPredicted RBP0.18□□□□□ -2.38
TOP2A-202ENST00000577541 NAT14Q8WUY8 206 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 PLAC4Q8WY50 150 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 LINC00208Q96KT6 92 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 KDM5CP41229 1560 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 NAV3Q8IVL0 2385 aa0.18□□□□□ -2.38
TOP2A-202ENST00000577541 KIAA1549LQ6ZVL6 1849 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 LRP5O75197 1615 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 LRP1Q07954 4544 aaKnown RBP0.17□□□□□ -2.38
TOP2A-202ENST00000577541 TRBV30A0A0K0K1B3 111 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 A0A1W2PPM0 123 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 C5orf58C9J3I9 102 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 H3BMG7 143 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 MT-ND4LP03901 98 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 TCRAP04437 139 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 SLC25A5P05141 298 aaKnown RBP0.17□□□□□ -2.38
TOP2A-202ENST00000577541 NBEAP1P0C6P0 100 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 CCL4P13236 92 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 ANK1P16157 1881 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 SDC4P31431 198 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms