RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 PLAC4Q8WY50 150 aa0.64□□□□□ -2.31
CYLD-213ENST00000568744 ISOC1Q96CN7 298 aa0.64□□□□□ -2.31
CYLD-213ENST00000568744 AP1S3Q96PC3 154 aa0.64□□□□□ -2.31
CYLD-213ENST00000568744 PLAC8Q9NZF1 115 aa0.64□□□□□ -2.31
CYLD-213ENST00000568744 USP24Q9UPU5 2620 aa0.64□□□□□ -2.31
CYLD-213ENST00000568744 YTHDC2Q9H6S0 1430 aaKnown RBP0.64□□□□□ -2.31
CYLD-213ENST00000568744 MAP1LC3B2A6NCE7 125 aa0.63□□□□□ -2.31
CYLD-213ENST00000568744 E5RI56 91 aa0.63□□□□□ -2.31
CYLD-213ENST00000568744 GABARAPH6UMI1 98 aa0.63□□□□□ -2.31
CYLD-213ENST00000568744 PPP1R2P3Q6NXS1 205 aa0.63□□□□□ -2.31
CYLD-213ENST00000568744 BOLA2Q9H3K6 86 aa0.63□□□□□ -2.31
CYLD-213ENST00000568744 KIAA1107Q9UPP5 1409 aa0.63□□□□□ -2.31
CYLD-213ENST00000568744 ADGBQ8N7X0 1667 aa0.62□□□□□ -2.31
CYLD-213ENST00000568744 APCP25054 2843 aa0.62□□□□□ -2.31
CYLD-213ENST00000568744 NAV3Q8IVL0 2385 aa0.62□□□□□ -2.31
CYLD-213ENST00000568744 SULT1C4O75897 302 aa0.62□□□□□ -2.31
CYLD-213ENST00000568744 NDUFA6P56556 154 aa0.62□□□□□ -2.31
CYLD-213ENST00000568744 TRAPPC8Q9Y2L5 1435 aa0.62□□□□□ -2.31
CYLD-213ENST00000568744 ASH1LQ9NR48 2969 aaKnown RBP0.61□□□□□ -2.31
CYLD-213ENST00000568744 TPT1P13693 172 aaKnown RBP0.61□□□□□ -2.31
CYLD-213ENST00000568744 SDC2P34741 201 aa0.61□□□□□ -2.31
CYLD-213ENST00000568744 GNG10P50151 68 aa0.61□□□□□ -2.31
CYLD-213ENST00000568744 STX12Q86Y82 276 aa0.61□□□□□ -2.31
CYLD-213ENST00000568744 C10orf111Q8N326 155 aa0.61□□□□□ -2.31
CYLD-213ENST00000568744 CLEC2BQ92478 149 aa0.61□□□□□ -2.31
CYLD-213ENST00000568744 DIRC1Q969H9 104 aa0.61□□□□□ -2.31
CYLD-213ENST00000568744 PRELID3AQ96N28 172 aa0.61□□□□□ -2.31
CYLD-213ENST00000568744 LPAR5Q9H1C0 372 aa0.61□□□□□ -2.31
CYLD-213ENST00000568744 SYNMO15061 1565 aa0.61□□□□□ -2.31
CYLD-213ENST00000568744 LOC107984156A0A0G2JMH3 177 aa0.6□□□□□ -2.31
CYLD-213ENST00000568744 BBIP1A8MTZ0 92 aa0.6□□□□□ -2.31
CYLD-213ENST00000568744 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
CYLD-213ENST00000568744 PFDN1O60925 122 aa0.6□□□□□ -2.31
CYLD-213ENST00000568744 S100A11P31949 105 aa0.6□□□□□ -2.31
CYLD-213ENST00000568744 ARL17AQ8IVW1 177 aa0.6□□□□□ -2.31
CYLD-213ENST00000568744 CCL4L1Q8NHW4 92 aa0.6□□□□□ -2.31
CYLD-213ENST00000568744 TSKUQ8WUA8 353 aa0.6□□□□□ -2.31
CYLD-213ENST00000568744 FAM103A1Q9BTL3 118 aaKnown RBP0.6□□□□□ -2.31
CYLD-213ENST00000568744 LAMTOR2Q9Y2Q5 125 aa0.6□□□□□ -2.31
CYLD-213ENST00000568744 H7BYZ3 331 aa0.59□□□□□ -2.31
CYLD-213ENST00000568744 BCL2P10415 239 aa0.59□□□□□ -2.31
CYLD-213ENST00000568744 SNRPD3P62318 126 aaKnown RBP0.59□□□□□ -2.31
CYLD-213ENST00000568744 CIB3Q96Q77 187 aaPredicted RBP0.59□□□□□ -2.31
CYLD-213ENST00000568744 CCDC32Q9BV29 185 aa0.59□□□□□ -2.31
CYLD-213ENST00000568744 RPS3P23396 243 aaKnown RBP eCLIP0.58□□□□□ -2.32
CYLD-213ENST00000568744 CAV3P56539 151 aa0.58□□□□□ -2.32
CYLD-213ENST00000568744 MAXP61244 160 aa0.58□□□□□ -2.32
CYLD-213ENST00000568744 TEX29Q8N6K0 151 aa0.58□□□□□ -2.32
CYLD-213ENST00000568744 KCPQ6ZWJ8 1503 aa0.58□□□□□ -2.32
CYLD-213ENST00000568744 LOC285556D6RIA3 1793 aa0.57□□□□□ -2.32
CYLD-213ENST00000568744 ANKRD31Q8N7Z5 1873 aa0.57□□□□□ -2.32
CYLD-213ENST00000568744 IGHV3-30P01768 117 aa0.57□□□□□ -2.32
CYLD-213ENST00000568744 IGHV3-30-5P0DP03 117 aa0.57□□□□□ -2.32
CYLD-213ENST00000568744 QRFPP83859 136 aa0.57□□□□□ -2.32
CYLD-213ENST00000568744 C3orf62Q6ZUJ4 267 aa0.57□□□□□ -2.32
CYLD-213ENST00000568744 LINC00305Q7Z4B0 112 aa0.57□□□□□ -2.32
CYLD-213ENST00000568744 PCBD2Q9H0N5 130 aa0.57□□□□□ -2.32
CYLD-213ENST00000568744 FKBP11Q9NYL4 201 aa0.57□□□□□ -2.32
CYLD-213ENST00000568744 ROCK1Q13464 1354 aa0.57□□□□□ -2.32
CYLD-213ENST00000568744 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
CYLD-213ENST00000568744 NUP210Q8TEM1 1887 aaPredicted RBP0.56□□□□□ -2.32
CYLD-213ENST00000568744 BCORL1Q5H9F3 1711 aa0.56□□□□□ -2.32
CYLD-213ENST00000568744 PRORSD1PA6NEY8 169 aa0.56□□□□□ -2.32
CYLD-213ENST00000568744 TMEM229BQ8NBD8 167 aa0.56□□□□□ -2.32
CYLD-213ENST00000568744 DSPPQ9NZW4 1301 aa0.56□□□□□ -2.32
CYLD-213ENST00000568744 FRAS1Q86XX4 4008 aa0.56□□□□□ -2.32
CYLD-213ENST00000568744 KNTC1P50748 2209 aa0.55□□□□□ -2.32
CYLD-213ENST00000568744 ARL5CA6NH57 179 aa0.55□□□□□ -2.32
CYLD-213ENST00000568744 CACNA1EQ15878 2313 aa0.55□□□□□ -2.32
CYLD-213ENST00000568744 DLC1Q96QB1 1528 aa0.54□□□□□ -2.32
CYLD-213ENST00000568744 LY6G6CO95867 125 aa0.54□□□□□ -2.32
CYLD-213ENST00000568744 SAA1P0DJI8 122 aaPredicted RBP0.54□□□□□ -2.32
CYLD-213ENST00000568744 TMEM78Q5T7P6 136 aa0.54□□□□□ -2.32
CYLD-213ENST00000568744 CSAG1Q6PB30 78 aa0.54□□□□□ -2.32
CYLD-213ENST00000568744 HRCT1Q6UXD1 115 aa0.54□□□□□ -2.32
CYLD-213ENST00000568744 TCTEX1D1Q8N7M0 179 aa0.54□□□□□ -2.32
CYLD-213ENST00000568744 LXNQ9BS40 222 aa0.54□□□□□ -2.32
CYLD-213ENST00000568744 TRAV13-1A0A0B4J241 112 aa0.53□□□□□ -2.32
CYLD-213ENST00000568744 LOC107986453A0A1B0GWG9 222 aa0.53□□□□□ -2.32
CYLD-213ENST00000568744 A0A1W2PPB8 328 aa0.53□□□□□ -2.32
CYLD-213ENST00000568744 A0A1W2PRS3 328 aa0.53□□□□□ -2.32
CYLD-213ENST00000568744 A6NN06 94 aa0.53□□□□□ -2.32
CYLD-213ENST00000568744 KIR3DP1A8MWS1 328 aa0.53□□□□□ -2.32
CYLD-213ENST00000568744 GYPBP06028 91 aa0.53□□□□□ -2.32
CYLD-213ENST00000568744 XAF1Q6GPH4 301 aa0.53□□□□□ -2.32
CYLD-213ENST00000568744 IZUMO2Q6UXV1 221 aa0.53□□□□□ -2.32
CYLD-213ENST00000568744 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.53□□□□□ -2.32
CYLD-213ENST00000568744 NABP2Q9BQ15 211 aa0.53□□□□□ -2.32
CYLD-213ENST00000568744 ATPIF1Q9UII2 106 aa0.53□□□□□ -2.32
CYLD-213ENST00000568744 TANC2Q9HCD6 1990 aa0.53□□□□□ -2.32
CYLD-213ENST00000568744 TRBV27A0A0K0K1C4 114 aa0.52□□□□□ -2.33
CYLD-213ENST00000568744 A0A1W2PRE2 83 aa0.52□□□□□ -2.33
CYLD-213ENST00000568744 E7EQ34 232 aa0.52□□□□□ -2.33
CYLD-213ENST00000568744 KRTAP2-3P0C7H8 128 aa0.52□□□□□ -2.33
CYLD-213ENST00000568744 KRTAP2-4Q9BYR9 128 aa0.52□□□□□ -2.33
CYLD-213ENST00000568744 KRTAP2-1Q9BYU5 128 aa0.52□□□□□ -2.33
CYLD-213ENST00000568744 FGD6Q6ZV73 1430 aa0.52□□□□□ -2.33
CYLD-213ENST00000568744 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.51□□□□□ -2.33
CYLD-213ENST00000568744 ANK1P16157 1881 aa0.51□□□□□ -2.33
CYLD-213ENST00000568744 GLYATL3Q5SZD4 288 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms