RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 USP54Q70EL1 1684 aa-0.35□□□□□ -2.47
PSMA4-221ENST00000560842 CSN2P05814 226 aa-0.36□□□□□ -2.47
PSMA4-221ENST00000560842 S100A6P06703 90 aa-0.36□□□□□ -2.47
PSMA4-221ENST00000560842 SNCBQ16143 134 aa-0.36□□□□□ -2.47
PSMA4-221ENST00000560842 ANGPTL5Q86XS5 388 aa-0.36□□□□□ -2.47
PSMA4-221ENST00000560842 OR4C12Q96R67 309 aa-0.36□□□□□ -2.47
PSMA4-221ENST00000560842 TPRKBQ9Y3C4 175 aa-0.36□□□□□ -2.47
PSMA4-221ENST00000560842 MACF1Q9UPN3 7388 aaKnown RBP-0.36□□□□□ -2.47
PSMA4-221ENST00000560842 ANKRD17O75179 2603 aaKnown RBP-0.37□□□□□ -2.47
PSMA4-221ENST00000560842 EVI2AP22794 236 aa-0.37□□□□□ -2.47
PSMA4-221ENST00000560842 ARF6P62330 175 aa-0.37□□□□□ -2.47
PSMA4-221ENST00000560842 MRPS25P82663 173 aaKnown RBP-0.37□□□□□ -2.47
PSMA4-221ENST00000560842 RTL8BQ17RB0 113 aa-0.37□□□□□ -2.47
PSMA4-221ENST00000560842 DIRC1Q969H9 104 aa-0.37□□□□□ -2.47
PSMA4-221ENST00000560842 PLEKHB2Q96CS7 222 aa-0.37□□□□□ -2.47
PSMA4-221ENST00000560842 MCEEQ96PE7 176 aa-0.37□□□□□ -2.47
PSMA4-221ENST00000560842 PBDC1Q9BVG4 233 aa-0.37□□□□□ -2.47
PSMA4-221ENST00000560842 TAF9BQ9HBM6 251 aa-0.37□□□□□ -2.47
PSMA4-221ENST00000560842 CACNA1HO95180 2353 aa-0.37□□□□□ -2.47
PSMA4-221ENST00000560842 MYH2Q9UKX2 1941 aa-0.37□□□□□ -2.47
PSMA4-221ENST00000560842 SPINK1P00995 79 aa-0.38□□□□□ -2.47
PSMA4-221ENST00000560842 IFNA1P01562 189 aa-0.38□□□□□ -2.47
PSMA4-221ENST00000560842 FABP4P15090 132 aa-0.38□□□□□ -2.47
PSMA4-221ENST00000560842 MRPS36P82909 103 aaKnown RBP-0.38□□□□□ -2.47
PSMA4-221ENST00000560842 NEDD8Q15843 81 aa-0.38□□□□□ -2.47
PSMA4-221ENST00000560842 IZUMO2Q6UXV1 221 aa-0.38□□□□□ -2.47
PSMA4-221ENST00000560842 SS18L2Q9UHA2 77 aa-0.38□□□□□ -2.47
PSMA4-221ENST00000560842 PRORSD1PA6NEY8 169 aa-0.39□□□□□ -2.47
PSMA4-221ENST00000560842 MFSD11O43934 449 aa-0.39□□□□□ -2.47
PSMA4-221ENST00000560842 E2F6O75461 281 aa-0.39□□□□□ -2.47
PSMA4-221ENST00000560842 ATP5HO75947 161 aa-0.39□□□□□ -2.47
PSMA4-221ENST00000560842 RPS3P23396 243 aaKnown RBP eCLIP-0.39□□□□□ -2.474e-9■■■□□ 19
PSMA4-221ENST00000560842 CARD19Q96LW7 228 aa-0.39□□□□□ -2.47
PSMA4-221ENST00000560842 TTC28Q96AY4 2481 aa-0.39□□□□□ -2.47
PSMA4-221ENST00000560842 F8P00451 2351 aa-0.39□□□□□ -2.47
PSMA4-221ENST00000560842 TRAPPC8Q9Y2L5 1435 aa-0.39□□□□□ -2.47
PSMA4-221ENST00000560842 ANKRD31Q8N7Z5 1873 aa-0.39□□□□□ -2.47
PSMA4-221ENST00000560842 RBBP6Q7Z6E9 1792 aaKnown RBP-0.4□□□□□ -2.47
PSMA4-221ENST00000560842 FLNCQ14315 2725 aa-0.4□□□□□ -2.47
PSMA4-221ENST00000560842 NBDYA0A0U1RRE5 68 aa-0.4□□□□□ -2.47
PSMA4-221ENST00000560842 GYPBP06028 91 aa-0.4□□□□□ -2.47
PSMA4-221ENST00000560842 OR13C6PQ8NH95 151 aa-0.4□□□□□ -2.47
PSMA4-221ENST00000560842 LINC00208Q96KT6 92 aa-0.4□□□□□ -2.47
PSMA4-221ENST00000560842 CEP19Q96LK0 163 aa-0.4□□□□□ -2.47
PSMA4-221ENST00000560842 OTORQ9NRC9 128 aa-0.4□□□□□ -2.47
PSMA4-221ENST00000560842 IL20Q9NYY1 176 aa-0.4□□□□□ -2.47
PSMA4-221ENST00000560842 MRPL35Q9NZE8 188 aaKnown RBP-0.4□□□□□ -2.47
PSMA4-221ENST00000560842 DSPPQ9NZW4 1301 aa-0.4□□□□□ -2.47
PSMA4-221ENST00000560842 ABCA2Q9BZC7 2435 aa-0.4□□□□□ -2.47
PSMA4-221ENST00000560842 ANK1P16157 1881 aa-0.41□□□□□ -2.47
PSMA4-221ENST00000560842 EIF3AQ14152 1382 aaKnown RBP-0.41□□□□□ -2.47
PSMA4-221ENST00000560842 KPNA4O00629 521 aaPredicted RBP-0.41□□□□□ -2.48
PSMA4-221ENST00000560842 FXYD3Q14802 87 aa-0.41□□□□□ -2.48
PSMA4-221ENST00000560842 LTC4SQ16873 150 aa-0.41□□□□□ -2.48
PSMA4-221ENST00000560842 HACD4Q5VWC8 232 aa-0.41□□□□□ -2.48
PSMA4-221ENST00000560842 CHMP6Q96FZ7 201 aa-0.41□□□□□ -2.48
PSMA4-221ENST00000560842 ATG2AQ2TAZ0 1938 aa-0.41□□□□□ -2.48
PSMA4-221ENST00000560842 MT-ND6P03923 174 aa-0.42□□□□□ -2.48
PSMA4-221ENST00000560842 CD3DP04234 171 aa-0.42□□□□□ -2.48
PSMA4-221ENST00000560842 PPP1R2P41236 205 aa-0.42□□□□□ -2.48
PSMA4-221ENST00000560842 POU6F1Q14863 301 aa-0.42□□□□□ -2.48
PSMA4-221ENST00000560842 KRTAP6-1Q3LI64 71 aa-0.42□□□□□ -2.48
PSMA4-221ENST00000560842 Q5BKY6 102 aa-0.42□□□□□ -2.48
PSMA4-221ENST00000560842 CSAG1Q6PB30 78 aa-0.42□□□□□ -2.48
PSMA4-221ENST00000560842 NEK7Q8TDX7 302 aa-0.42□□□□□ -2.48
PSMA4-221ENST00000560842 LRTM1Q9HBL6 345 aa-0.42□□□□□ -2.48
PSMA4-221ENST00000560842 HMCN2Q8NDA2 5059 aa-0.43□□□□□ -2.48
PSMA4-221ENST00000560842 H3BQV1 296 aa-0.43□□□□□ -2.48
PSMA4-221ENST00000560842 TRACP01848 142 aa-0.43□□□□□ -2.48
PSMA4-221ENST00000560842 GNG3P63215 75 aa-0.43□□□□□ -2.48
PSMA4-221ENST00000560842 C5orf56Q8N8D9 126 aa-0.43□□□□□ -2.48
PSMA4-221ENST00000560842 OR4B1Q8NGF8 309 aa-0.43□□□□□ -2.48
PSMA4-221ENST00000560842 CIB3Q96Q77 187 aaPredicted RBP-0.43□□□□□ -2.48
PSMA4-221ENST00000560842 PROK2Q9HC23 129 aa-0.43□□□□□ -2.48
PSMA4-221ENST00000560842 DSTQ03001 7570 aaKnown RBP-0.43□□□□□ -2.48
PSMA4-221ENST00000560842 ZNF56Q15929 161 aa-0.44□□□□□ -2.48
PSMA4-221ENST00000560842 OR5AK2Q8NH90 309 aa-0.44□□□□□ -2.48
PSMA4-221ENST00000560842 ISOC1Q96CN7 298 aa-0.44□□□□□ -2.48
PSMA4-221ENST00000560842 AP1S3Q96PC3 154 aa-0.44□□□□□ -2.48
PSMA4-221ENST00000560842 LAMTOR3Q9UHA4 124 aa-0.44□□□□□ -2.48
PSMA4-221ENST00000560842 WNK2Q9Y3S1 2297 aa-0.44□□□□□ -2.48
PSMA4-221ENST00000560842 TECPR2O15040 1411 aa-0.45□□□□□ -2.48
PSMA4-221ENST00000560842 C3orf85A0A1B0GTC6 90 aa-0.45□□□□□ -2.48
PSMA4-221ENST00000560842 IGF2P01344 180 aa-0.45□□□□□ -2.48
PSMA4-221ENST00000560842 SNRPD3P62318 126 aaKnown RBP-0.45□□□□□ -2.48
PSMA4-221ENST00000560842 TCTEX1D1Q8N7M0 179 aa-0.45□□□□□ -2.48
PSMA4-221ENST00000560842 BORCS8Q96FH0 119 aa-0.45□□□□□ -2.48
PSMA4-221ENST00000560842 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.45□□□□□ -2.48
PSMA4-221ENST00000560842 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.46□□□□□ -2.48
PSMA4-221ENST00000560842 POLQO75417 2590 aa-0.46□□□□□ -2.48
PSMA4-221ENST00000560842 TRPM7Q96QT4 1865 aa-0.46□□□□□ -2.48
PSMA4-221ENST00000560842 TCOF1Q13428 1488 aaKnown RBP-0.46□□□□□ -2.48
PSMA4-221ENST00000560842 A0A096LNT2 108 aa-0.46□□□□□ -2.48
PSMA4-221ENST00000560842 NDUFA6P56556 154 aa-0.46□□□□□ -2.48
PSMA4-221ENST00000560842 RPL19P84098 196 aaKnown RBP-0.46□□□□□ -2.48
PSMA4-221ENST00000560842 CCSMST1Q4G0I0 132 aa-0.46□□□□□ -2.48
PSMA4-221ENST00000560842 CLEC2BQ92478 149 aa-0.46□□□□□ -2.48
PSMA4-221ENST00000560842 NUBP2Q9Y5Y2 271 aa-0.46□□□□□ -2.48
PSMA4-221ENST00000560842 MYH3P11055 1940 aa-0.46□□□□□ -2.48
PSMA4-221ENST00000560842 MYO7AQ13402 2215 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms