RNA–Protein interactions for RNA: ENST00000557290.1

PSMA3-212, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-212ENST00000557290 HIST1H2BLQ99880 126 aa0.56□□□□□ -2.32
PSMA3-212ENST00000557290 CMSS1Q9BQ75 279 aaKnown RBP0.56□□□□□ -2.32
PSMA3-212ENST00000557290 SELENOSQ9BQE4 189 aa0.56□□□□□ -2.32
PSMA3-212ENST00000557290 SLC25A21Q9BQT8 299 aaPredicted RBP0.56□□□□□ -2.32
PSMA3-212ENST00000557290 SEC11CQ9BY50 192 aa0.56□□□□□ -2.32
PSMA3-212ENST00000557290 CACYBPQ9HB71 228 aaKnown RBP0.56□□□□□ -2.32
PSMA3-212ENST00000557290 BIN3Q9NQY0 253 aa0.56□□□□□ -2.32
PSMA3-212ENST00000557290 CALML5Q9NZT1 146 aa0.56□□□□□ -2.32
PSMA3-212ENST00000557290 MED11Q9P086 117 aa0.56□□□□□ -2.32
PSMA3-212ENST00000557290 ABRACLQ9P1F3 81 aa0.56□□□□□ -2.32
PSMA3-212ENST00000557290 SSR3Q9UNL2 185 aa0.56□□□□□ -2.32
PSMA3-212ENST00000557290 PRELID3BQ9Y3B1 194 aa0.56□□□□□ -2.32
PSMA3-212ENST00000557290 RNF11Q9Y3C5 154 aa0.56□□□□□ -2.32
PSMA3-212ENST00000557290 FRMPD1Q5SYB0 1578 aa0.56□□□□□ -2.32
PSMA3-212ENST00000557290 PREX2Q70Z35 1606 aa0.56□□□□□ -2.32
PSMA3-212ENST00000557290 PHRF1Q9P1Y6 1649 aaKnown RBP0.56□□□□□ -2.32
PSMA3-212ENST00000557290 ALKQ9UM73 1620 aa0.56□□□□□ -2.32
PSMA3-212ENST00000557290 TMEM2Q9UHN6 1383 aa0.56□□□□□ -2.32
PSMA3-212ENST00000557290 CLTCQ00610 1675 aaKnown RBP0.56□□□□□ -2.32
PSMA3-212ENST00000557290 SHPRHQ149N8 1683 aa0.56□□□□□ -2.32
PSMA3-212ENST00000557290 SPHKAPQ2M3C7 1700 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 CRYBG1Q9Y4K1 1723 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 COL1A1P02452 1464 aaPredicted RBP0.55□□□□□ -2.32
PSMA3-212ENST00000557290 PXDNQ92626 1479 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 CASZ1Q86V15 1759 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 NWD1Q149M9 1564 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 MED1Q15648 1581 aaPredicted RBP0.55□□□□□ -2.32
PSMA3-212ENST00000557290 A0A087WWC5 75 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 A0A096LPI6 279 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 hADV38S2A0JD32 116 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 C7orf71A4D174 169 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 MCRIP1C9JLW8 97 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 E5RI56 91 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 ZNF670-ZNF695F2Z2N8 137 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 GABARAPH6UMI1 98 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 GNGT2O14610 69 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 CCL25O15444 150 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 NIPSNAP2O75323 286 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 ATG12O94817 140 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 ZNF682O95780 498 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 IFNA17P01571 189 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 MT-ND4LP03901 98 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 SCGB1A1P11684 91 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 RPS3P23396 243 aaKnown RBP eCLIP0.55□□□□□ -2.32
PSMA3-212ENST00000557290 SDC4P31431 198 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 S100A11P31949 105 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 FAUP35544 74 aaKnown RBP0.55□□□□□ -2.32
PSMA3-212ENST00000557290 OMPP47874 163 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 POLR2JP52435 117 aaKnown RBP0.55□□□□□ -2.32
PSMA3-212ENST00000557290 CEBPGP53567 150 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 NCS1P62166 190 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 ARF6P62330 175 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 RPL19P84098 196 aaKnown RBP0.55□□□□□ -2.32
PSMA3-212ENST00000557290 EIF3IQ13347 325 aaKnown RBP0.55□□□□□ -2.32
PSMA3-212ENST00000557290 SMCO1Q147U7 214 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 PEA15Q15121 130 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 TMED2Q15363 201 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 TAF1AQ15573 450 aaPredicted RBP0.55□□□□□ -2.32
PSMA3-212ENST00000557290 TMEM244Q5VVB8 128 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 PTRHD1Q6GMV3 140 aaKnown RBP0.55□□□□□ -2.32
PSMA3-212ENST00000557290 RPL13AP3Q6NVV1 102 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 HAGHLQ6PII5 290 aaPredicted RBP0.55□□□□□ -2.32
PSMA3-212ENST00000557290 TOMM20LQ6UXN7 152 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 TMED4Q7Z7H5 227 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 PDZD9Q8IXQ8 264 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 C4orf33Q8N1A6 199 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 OR5H6Q8NGV6 325 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 GNPDA2Q8TDQ7 276 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 BORCS7Q96B45 105 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 S100A16Q96FQ6 103 aaKnown RBP0.55□□□□□ -2.32
PSMA3-212ENST00000557290 S100A13Q99584 98 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 C2orf88Q9BSF0 95 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 PBDC1Q9BVG4 233 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 NMES1Q9C002 83 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 BANF2Q9H503 90 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 RNF122Q9H9V4 155 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 NPVFQ9HCQ7 196 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 BCL2L10Q9HD36 194 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 SMCO4Q9NRQ5 59 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 LYRM2Q9NU23 88 aaPredicted RBP0.55□□□□□ -2.32
PSMA3-212ENST00000557290 UQCC1Q9NVA1 299 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 COA4Q9NYJ1 87 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 OPTCQ9UBM4 332 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 METTL1Q9UBP6 276 aaKnown RBP0.55□□□□□ -2.32
PSMA3-212ENST00000557290 CACFD1Q9UGQ2 172 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 GINS2Q9Y248 185 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 V9GYQ6 96 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 LRP6O75581 1613 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 EML6Q6ZMW3 1958 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 CROCC2H7BZ55 1655 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 PIK3C2AO00443 1686 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 ZC3H13Q5T200 1668 aaKnown RBP0.55□□□□□ -2.32
PSMA3-212ENST00000557290 PREX1Q8TCU6 1659 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 QRICH2Q9H0J4 1663 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 LRRIQ1Q96JM4 1722 aa0.55□□□□□ -2.32
PSMA3-212ENST00000557290 KIF1BO60333 1816 aa0.54□□□□□ -2.32
PSMA3-212ENST00000557290 LRP5O75197 1615 aa0.54□□□□□ -2.32
PSMA3-212ENST00000557290 MYOM1P52179 1685 aa0.54□□□□□ -2.32
PSMA3-212ENST00000557290 USP54Q70EL1 1684 aa0.54□□□□□ -2.32
PSMA3-212ENST00000557290 RIMS1Q86UR5 1692 aaKnown RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms