RNA–Protein interactions for RNA: ENST00000557290.1

PSMA3-212, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-212ENST00000557290 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
PSMA3-212ENST00000557290 CHIC1Q5VXU3 224 aa22.83■■□□□ 1.25
PSMA3-212ENST00000557290 SENP3Q9H4L4 574 aaPredicted RBP20.31■□□□□ 0.84
PSMA3-212ENST00000557290 PHF23Q9BUL5 403 aaPredicted RBP20.1■□□□□ 0.81
PSMA3-212ENST00000557290 FOXD1Q16676 465 aa18.95■□□□□ 0.62
PSMA3-212ENST00000557290 PLPPR3Q6T4P5 718 aa18.42■□□□□ 0.54
PSMA3-212ENST00000557290 PPP6R1Q9UPN7 881 aa17.86■□□□□ 0.45
PSMA3-212ENST00000557290 ADRA2BP18089 450 aa17.79■□□□□ 0.44
PSMA3-212ENST00000557290 PIAS4Q8N2W9 510 aaPredicted RBP17.69■□□□□ 0.42
PSMA3-212ENST00000557290 MSH5O43196 834 aa17.62■□□□□ 0.41
PSMA3-212ENST00000557290 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
PSMA3-212ENST00000557290 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
PSMA3-212ENST00000557290 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
PSMA3-212ENST00000557290 SCAF1Q9H7N4 1312 aaKnown RBP16.22■□□□□ 0.19
PSMA3-212ENST00000557290 DMRT2Q9Y5R5 561 aa16.16■□□□□ 0.18
PSMA3-212ENST00000557290 KCNA4P22459 653 aa16.13■□□□□ 0.17
PSMA3-212ENST00000557290 NCBP3Q53F19 620 aaKnown RBP15.86■□□□□ 0.13
PSMA3-212ENST00000557290 CNKSR2Q8WXI2 1034 aa15.77■□□□□ 0.12
PSMA3-212ENST00000557290 NPM3O75607 178 aaKnown RBP15.68■□□□□ 0.1
PSMA3-212ENST00000557290 HOXD11P31277 338 aaPredicted RBP15.63■□□□□ 0.09
PSMA3-212ENST00000557290 RNF216Q9NWF9 866 aaPredicted RBP15.54■□□□□ 0.08
PSMA3-212ENST00000557290 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
PSMA3-212ENST00000557290 SLC4A1APQ9BWU0 796 aaKnown RBP15.36■□□□□ 0.05
PSMA3-212ENST00000557290 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
PSMA3-212ENST00000557290 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
PSMA3-212ENST00000557290 RNF39Q9H2S5 420 aa15.08■□□□□ 0
PSMA3-212ENST00000557290 CACNB1Q02641 598 aaPredicted RBP15.01□□□□□ -0.01
PSMA3-212ENST00000557290 CSRNP3Q8WYN3 585 aa14.87□□□□□ -0.03
PSMA3-212ENST00000557290 ZBTB22O15209 634 aa14.86□□□□□ -0.03
PSMA3-212ENST00000557290 C1QBPQ07021 282 aaKnown RBP14.86□□□□□ -0.03
PSMA3-212ENST00000557290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.84□□□□□ -0.03
PSMA3-212ENST00000557290 SLC4A2P04920 1241 aa14.78□□□□□ -0.04
PSMA3-212ENST00000557290 FOXD4L1Q9NU39 408 aa14.74□□□□□ -0.05
PSMA3-212ENST00000557290 U3KPZ7 1027 aaPredicted RBP14.59□□□□□ -0.07
PSMA3-212ENST00000557290 MYCNP04198 464 aaPredicted RBP14.45□□□□□ -0.1
PSMA3-212ENST00000557290 SPINK5Q9NQ38 1064 aaPredicted RBP14.33□□□□□ -0.12
PSMA3-212ENST00000557290 CAPN15O75808 1086 aa14.25□□□□□ -0.13
PSMA3-212ENST00000557290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.2□□□□□ -0.14
PSMA3-212ENST00000557290 HNRNPUL2Q1KMD3 747 aaKnown RBP14.2□□□□□ -0.14
PSMA3-212ENST00000557290 DSG3P32926 999 aa14.18□□□□□ -0.14
PSMA3-212ENST00000557290 SAMD1Q6SPF0 538 aaPredicted RBP14.18□□□□□ -0.14
PSMA3-212ENST00000557290 ATXN8OSP0DMR3 200 aa14.17□□□□□ -0.14
PSMA3-212ENST00000557290 ATF5Q9Y2D1 282 aaPredicted RBP14.14□□□□□ -0.15
PSMA3-212ENST00000557290 APLP2Q06481 763 aa14.13□□□□□ -0.15
PSMA3-212ENST00000557290 TRHP20396 242 aaPredicted RBP14.07□□□□□ -0.16
PSMA3-212ENST00000557290 ZNF219Q9P2Y4 722 aaPredicted RBP14.04□□□□□ -0.16
PSMA3-212ENST00000557290 ABCB7O75027 752 aa13.94□□□□□ -0.18
PSMA3-212ENST00000557290 POLA2Q14181 598 aa13.75□□□□□ -0.21
PSMA3-212ENST00000557290 MKRN4PQ13434 485 aaPredicted RBP13.51□□□□□ -0.25
PSMA3-212ENST00000557290 RBM42Q9BTD8 480 aaKnown RBP13.47□□□□□ -0.25
PSMA3-212ENST00000557290 FBLN2P98095 1184 aa13.45□□□□□ -0.26
PSMA3-212ENST00000557290 FKBP8Q14318 412 aa13.45□□□□□ -0.26
PSMA3-212ENST00000557290 ZBTB12Q9Y330 459 aaPredicted RBP13.45□□□□□ -0.26
PSMA3-212ENST00000557290 POTEHQ6S545 545 aa13.34□□□□□ -0.27
PSMA3-212ENST00000557290 OSCARQ8IYS5 282 aa13.29□□□□□ -0.28
PSMA3-212ENST00000557290 SPDYE4A6NLX3 237 aa13.26□□□□□ -0.29
PSMA3-212ENST00000557290 AKT1S1Q96B36 256 aa13.24□□□□□ -0.29
PSMA3-212ENST00000557290 CHRDL2Q6WN34 429 aa13.14□□□□□ -0.31
PSMA3-212ENST00000557290 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
PSMA3-212ENST00000557290 ZNF692Q9BU19 519 aaPredicted RBP13.09□□□□□ -0.31
PSMA3-212ENST00000557290 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
PSMA3-212ENST00000557290 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
PSMA3-212ENST00000557290 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
PSMA3-212ENST00000557290 PROM2Q8N271 834 aa13.02□□□□□ -0.33
PSMA3-212ENST00000557290 SSUH2Q9Y2M2 353 aa13.01□□□□□ -0.33
PSMA3-212ENST00000557290 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
PSMA3-212ENST00000557290 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
PSMA3-212ENST00000557290 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
PSMA3-212ENST00000557290 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
PSMA3-212ENST00000557290 FBXO3Q9UK99 471 aa12.84□□□□□ -0.35
PSMA3-212ENST00000557290 SPDYE1Q8NFV5 336 aaPredicted RBP12.8□□□□□ -0.36
PSMA3-212ENST00000557290 CLEC11AQ9Y240 323 aa12.75□□□□□ -0.37
PSMA3-212ENST00000557290 VASPP50552 380 aaPredicted RBP12.72□□□□□ -0.37
PSMA3-212ENST00000557290 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
PSMA3-212ENST00000557290 PRKAR2AP13861 404 aaKnown RBP12.62□□□□□ -0.39
PSMA3-212ENST00000557290 HAX1O00165 279 aa12.57□□□□□ -0.4
PSMA3-212ENST00000557290 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
PSMA3-212ENST00000557290 IFNLR1Q8IU57 520 aaPredicted RBP12.57□□□□□ -0.4
PSMA3-212ENST00000557290 MIER1Q8N108 512 aa12.56□□□□□ -0.4
PSMA3-212ENST00000557290 PLCD3Q8N3E9 789 aa12.56□□□□□ -0.4
PSMA3-212ENST00000557290 SP7Q8TDD2 431 aaPredicted RBP12.55□□□□□ -0.4
PSMA3-212ENST00000557290 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
PSMA3-212ENST00000557290 RTN4Q9NQC3 1192 aaKnown RBP12.51□□□□□ -0.41
PSMA3-212ENST00000557290 EVX2Q03828 476 aa12.49□□□□□ -0.41
PSMA3-212ENST00000557290 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
PSMA3-212ENST00000557290 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.41
PSMA3-212ENST00000557290 CREBZFQ9NS37 354 aa12.43□□□□□ -0.42
PSMA3-212ENST00000557290 C19orf67A6NJJ6 358 aa12.42□□□□□ -0.42
PSMA3-212ENST00000557290 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
PSMA3-212ENST00000557290 SPOCK2Q92563 424 aa12.37□□□□□ -0.43
PSMA3-212ENST00000557290 FARP1Q9Y4F1 1045 aaPredicted RBP12.36□□□□□ -0.43
PSMA3-212ENST00000557290 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
PSMA3-212ENST00000557290 MNX1P50219 401 aaPredicted RBP12.31□□□□□ -0.44
PSMA3-212ENST00000557290 CD44P16070 742 aaKnown RBP12.22□□□□□ -0.45
PSMA3-212ENST00000557290 NUBP1P53384 320 aa12.22□□□□□ -0.45
PSMA3-212ENST00000557290 PKD2Q13563 968 aa12.21□□□□□ -0.45
PSMA3-212ENST00000557290 GABBR2O75899 941 aa12.19□□□□□ -0.46
PSMA3-212ENST00000557290 CIZ1Q9ULV3 898 aaPredicted RBP12.19□□□□□ -0.46
PSMA3-212ENST00000557290 NPM1P06748 294 aaKnown RBP eCLIP12.17□□□□□ -0.46
PSMA3-212ENST00000557290 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms