RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 PRR32B1ATL7 298 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 NXPH3O95157 252 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 IGLV1-40P01703 118 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 SLC25A16P16260 332 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 NOVP48745 357 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 S100A7L2Q5SY68 101 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 CEMP1Q6PRD7 247 aaPredicted RBP3.95□□□□□ -1.78
UBE4A-203ENST00000545354 ZNF329Q86UD4 541 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 Q96M85 177 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 C17orf77Q96MU5 243 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 C7orf69Q9H7B7 122 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 SLC25A22Q9H936 323 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 Q9UFV3 132 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 TAC3Q9UHF0 121 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 PRO1854Q9UHT4 67 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 SHROOM3Q8TF72 1996 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 ANKRD36A6QL64 1941 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 CCL24O00175 119 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 RBM3P98179 157 aaKnown RBP3.95□□□□□ -1.78
UBE4A-203ENST00000545354 ATP5EP2Q5VTU8 51 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 ZNF497Q6ZNH5 498 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 MDP1Q86V88 176 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 PGLYRP4Q96LB8 373 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 TIMM17AQ99595 171 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 Q9H3A6 140 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 C6orf106Q9H6K1 298 aaPredicted RBP3.95□□□□□ -1.78
UBE4A-203ENST00000545354 PSENENQ9NZ42 101 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 CKAP5Q14008 2032 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 C5orf42Q9H799 3197 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 USP34Q70CQ2 3546 aa3.95□□□□□ -1.78
UBE4A-203ENST00000545354 CHD7Q9P2D1 2997 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 IBA57-AS1B1ANH7 110 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 ZNF73O43830 326 aaPredicted RBP3.94□□□□□ -1.78
UBE4A-203ENST00000545354 CD70P32970 193 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 RPL34P49207 117 aaKnown RBP3.94□□□□□ -1.78
UBE4A-203ENST00000545354 KLKP1Q107X0 134 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 LINC00173Q6ZV60 143 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 FANCD2OSQ96PS1 177 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 IGLV3-22A0A075B6J6 115 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 TRAV8-3A0A0A6YYJ7 113 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 TEX49A0A1B0GTD5 131 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 HMGN4O00479 90 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 NXPH4O95158 308 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 LTAP01374 205 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 IL9P15248 144 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 Q6JHZ5 121 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 LINC00596Q86U02 117 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 LYPD6Q86Y78 171 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 MKXQ8IYA7 352 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 Q8N8P6 123 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 DCANP1Q8TF63 244 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 CCL17Q92583 94 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 LINC00597Q9H2U6 94 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 SCN10AQ9Y5Y9 1956 aa3.94□□□□□ -1.78
UBE4A-203ENST00000545354 VWA8A3KMH1 1905 aa3.93□□□□□ -1.78
UBE4A-203ENST00000545354 A0A0A6YYD4 124 aa3.93□□□□□ -1.78
UBE4A-203ENST00000545354 TRAV13-2A0A0B4J235 113 aa3.93□□□□□ -1.78
UBE4A-203ENST00000545354 TRBV30A0A0K0K1B3 111 aa3.93□□□□□ -1.78
UBE4A-203ENST00000545354 C16orf97H3BN30 126 aa3.93□□□□□ -1.78
UBE4A-203ENST00000545354 TMEM256-PLSCR3K7ERE1 68 aa3.93□□□□□ -1.78
UBE4A-203ENST00000545354 S100A4P26447 101 aaKnown RBP3.93□□□□□ -1.78
UBE4A-203ENST00000545354 ZNF876PQ49A33 203 aa3.93□□□□□ -1.78
UBE4A-203ENST00000545354 PIK3CD-AS1Q5SR53 167 aa3.93□□□□□ -1.78
UBE4A-203ENST00000545354 SLC25A29Q8N8R3 303 aa3.93□□□□□ -1.78
UBE4A-203ENST00000545354 ZNF714Q96N38 554 aa3.93□□□□□ -1.78
UBE4A-203ENST00000545354 CCL13Q99616 98 aa3.93□□□□□ -1.78
UBE4A-203ENST00000545354 ESM1Q9NQ30 184 aa3.93□□□□□ -1.78
UBE4A-203ENST00000545354 MRPL35Q9NZE8 188 aaKnown RBP3.93□□□□□ -1.78
UBE4A-203ENST00000545354 CTSZQ9UBR2 303 aa3.93□□□□□ -1.78
UBE4A-203ENST00000545354 HCFC1P51610 2035 aa3.93□□□□□ -1.78
UBE4A-203ENST00000545354 PLXNA1Q9UIW2 1896 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 TRBV7-1A0A0A6YYK4 115 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 A0A1W2PQD3 144 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 ZNF883P0CG24 379 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 XCL1P47992 114 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 RIGQ13278 110 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 UNQ9165/PRO28630Q6UXU0 137 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 SFTPA1Q8IWL2 248 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 ODF3L1Q8IXM7 274 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 Q8N2B8 174 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 CD177Q8N6Q3 437 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 NKAPP1Q8N9T2 125 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 SPACA5Q96QH8 159 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 XCL2Q9UBD3 114 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 SPINK4O60575 86 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 HMGN2P05204 90 aaKnown RBP3.92□□□□□ -1.78
UBE4A-203ENST00000545354 LMO2P25791 158 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 PLGLAQ15195 96 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 MSMPQ1L6U9 139 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 UBALD1Q8TB05 177 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 OPRPNQ99935 248 aaPredicted RBP3.92□□□□□ -1.78
UBE4A-203ENST00000545354 PLXNA3P51805 1871 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 EXPH5Q8NEV8 1989 aa3.92□□□□□ -1.78
UBE4A-203ENST00000545354 GREB1LQ9C091 1923 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-203ENST00000545354 OBSL1O75147 1896 aa3.91□□□□□ -1.78
UBE4A-203ENST00000545354 TRBV10-3A0A0K0K1G6 114 aa3.91□□□□□ -1.78
UBE4A-203ENST00000545354 CFC1BP0CG36 223 aa3.91□□□□□ -1.78
UBE4A-203ENST00000545354 CFC1P0CG37 223 aa3.91□□□□□ -1.78
UBE4A-203ENST00000545354 MP68P56378 58 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms