RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 NPIPB3Q92617 1050 aa16.81■□□□□ 0.28
TRIM3-214ENST00000536344 IFI27P40305 119 aaPredicted RBP16.81■□□□□ 0.28
TRIM3-214ENST00000536344 RPL27AP46776 148 aaKnown RBP16.81■□□□□ 0.28
TRIM3-214ENST00000536344 OR11H6Q8NGC7 330 aa16.81■□□□□ 0.28
TRIM3-214ENST00000536344 ATP5J2P56134 94 aa16.8■□□□□ 0.28
TRIM3-214ENST00000536344 CACNG7P62955 275 aa16.8■□□□□ 0.28
TRIM3-214ENST00000536344 M0R1W7 72 aa16.8■□□□□ 0.28
TRIM3-214ENST00000536344 CNIH1O95406 144 aa16.8■□□□□ 0.28
TRIM3-214ENST00000536344 ARMS2P0C7Q2 107 aa16.8■□□□□ 0.28
TRIM3-214ENST00000536344 ORM2P19652 201 aa16.8■□□□□ 0.28
TRIM3-214ENST00000536344 SAMD5Q5TGI4 173 aa16.8■□□□□ 0.28
TRIM3-214ENST00000536344 WFDC3Q8IUB2 231 aa16.8■□□□□ 0.28
TRIM3-214ENST00000536344 IGHV4-61A0A0C4DH41 118 aa16.79■□□□□ 0.28
TRIM3-214ENST00000536344 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.79■□□□□ 0.28
TRIM3-214ENST00000536344 SMAD7O15105 426 aaKnown RBP16.79■□□□□ 0.28
TRIM3-214ENST00000536344 OR5A1Q8NGJ0 315 aa16.79■□□□□ 0.28
TRIM3-214ENST00000536344 PRSS3P2Q8NHM4 247 aa16.79■□□□□ 0.28
TRIM3-214ENST00000536344 SMPXQ9UHP9 88 aa16.79■□□□□ 0.28
TRIM3-214ENST00000536344 FABP2P12104 132 aa16.79■□□□□ 0.28
TRIM3-214ENST00000536344 PSG3Q16557 428 aa16.79■□□□□ 0.28
TRIM3-214ENST00000536344 DAZAP1Q96EP5 407 aaKnown RBP16.79■□□□□ 0.28
TRIM3-214ENST00000536344 TMEM238LA0A1B0GVL6 79 aa16.78■□□□□ 0.28
TRIM3-214ENST00000536344 NCBP2LA6PVI3 153 aaKnown RBP16.78■□□□□ 0.28
TRIM3-214ENST00000536344 CRYGBP07316 175 aa16.78■□□□□ 0.28
TRIM3-214ENST00000536344 MTURNQ8N3F0 131 aa16.78■□□□□ 0.28
TRIM3-214ENST00000536344 CFHR4Q92496 578 aa16.78■□□□□ 0.28
TRIM3-214ENST00000536344 TLN2Q9Y4G6 2542 aa16.78■□□□□ 0.28
TRIM3-214ENST00000536344 ODF3BA8MYP8 253 aa16.78■□□□□ 0.28
TRIM3-214ENST00000536344 FXYD2P54710 66 aa16.78■□□□□ 0.28
TRIM3-214ENST00000536344 ATP6V0BQ99437 205 aa16.78■□□□□ 0.28
TRIM3-214ENST00000536344 S4R3C0 116 aa16.78■□□□□ 0.28
TRIM3-214ENST00000536344 SMIM17P0DL12 118 aa16.77■□□□□ 0.28
TRIM3-214ENST00000536344 CEACAM3P40198 252 aa16.77■□□□□ 0.28
TRIM3-214ENST00000536344 RAB9AP51151 201 aa16.77■□□□□ 0.28
TRIM3-214ENST00000536344 KLF17Q5JT82 389 aaPredicted RBP16.77■□□□□ 0.28
TRIM3-214ENST00000536344 TPPP3Q9BW30 176 aa16.77■□□□□ 0.28
TRIM3-214ENST00000536344 IGKV1D-37A0A075B6S9 117 aa16.77■□□□□ 0.28
TRIM3-214ENST00000536344 GAGE12HA6NDE8 117 aa16.77■□□□□ 0.28
TRIM3-214ENST00000536344 NDUFS8O00217 210 aa16.77■□□□□ 0.28
TRIM3-214ENST00000536344 WFDC2Q14508 124 aa16.77■□□□□ 0.28
TRIM3-214ENST00000536344 CCDC144NLQ6NUI1 221 aa16.77■□□□□ 0.28
TRIM3-214ENST00000536344 FA2HQ7L5A8 372 aa16.77■□□□□ 0.28
TRIM3-214ENST00000536344 SRSF12Q8WXF0 261 aaKnown RBP16.77■□□□□ 0.28
TRIM3-214ENST00000536344 SIRPDQ9H106 197 aa16.77■□□□□ 0.28
TRIM3-214ENST00000536344 KLF12Q9Y4X4 402 aa16.76■□□□□ 0.27
TRIM3-214ENST00000536344 CCDC168Q8NDH2 2452 aa16.76■□□□□ 0.27
TRIM3-214ENST00000536344 IGHV4-30-2A0A087WSY4 118 aa16.76■□□□□ 0.27
TRIM3-214ENST00000536344 GCSHP23434 173 aa16.76■□□□□ 0.27
TRIM3-214ENST00000536344 SH2D6Q7Z4S9 175 aa16.76■□□□□ 0.27
TRIM3-214ENST00000536344 LTAP01374 205 aa16.75■□□□□ 0.27
TRIM3-214ENST00000536344 CSN1S1P47710 185 aa16.75■□□□□ 0.27
TRIM3-214ENST00000536344 APCP25054 2843 aa16.74■□□□□ 0.27
TRIM3-214ENST00000536344 HELZ2Q9BYK8 2649 aaKnown RBP16.74■□□□□ 0.27
TRIM3-214ENST00000536344 A0A1B0GV72 72 aa16.74■□□□□ 0.27
TRIM3-214ENST00000536344 TEX22C9J3V5 150 aa16.74■□□□□ 0.27
TRIM3-214ENST00000536344 SOX21Q9Y651 276 aaPredicted RBP16.74■□□□□ 0.27
TRIM3-214ENST00000536344 TRAV26-1A0A087WT03 109 aa16.74■□□□□ 0.27
TRIM3-214ENST00000536344 ZNF785A8K8V0 405 aa16.73■□□□□ 0.27
TRIM3-214ENST00000536344 HAX1O00165 279 aa16.73■□□□□ 0.27
TRIM3-214ENST00000536344 NBR2O15453 112 aa16.73■□□□□ 0.27
TRIM3-214ENST00000536344 SAA4P35542 130 aa16.73■□□□□ 0.27
TRIM3-214ENST00000536344 BRD3OSQ6XYD6 125 aa16.73■□□□□ 0.27
TRIM3-214ENST00000536344 MAPK1IP1LQ8NDC0 245 aa16.73■□□□□ 0.27
TRIM3-214ENST00000536344 CD300EQ496F6 205 aaPredicted RBP16.73■□□□□ 0.27
TRIM3-214ENST00000536344 DKK2Q9UBU2 259 aa16.73■□□□□ 0.27
TRIM3-214ENST00000536344 ZNF469Q96JG9 3925 aaPredicted RBP16.72■□□□□ 0.27
TRIM3-214ENST00000536344 TCRAP04437 139 aa16.72■□□□□ 0.27
TRIM3-214ENST00000536344 CT83Q5H943 113 aa16.72■□□□□ 0.27
TRIM3-214ENST00000536344 PRNTQ86SH4 94 aa16.72■□□□□ 0.27
TRIM3-214ENST00000536344 INSL3P51460 131 aa16.72■□□□□ 0.27
TRIM3-214ENST00000536344 SUB1P53999 127 aaKnown RBP eCLIP16.72■□□□□ 0.27
TRIM3-214ENST00000536344 ATP5G2Q06055 141 aa16.72■□□□□ 0.27
TRIM3-214ENST00000536344 IGKV2D-26A0A0A0MRZ7 120 aa16.71■□□□□ 0.27
TRIM3-214ENST00000536344 TCRBV4S1A1TA0A5B7 111 aa16.71■□□□□ 0.27
TRIM3-214ENST00000536344 SMIM13P0DJ93 91 aa16.71■□□□□ 0.27
TRIM3-214ENST00000536344 BCL6BQ8N143 479 aaPredicted RBP16.71■□□□□ 0.27
TRIM3-214ENST00000536344 OR1L4Q8NGR5 311 aa16.71■□□□□ 0.27
TRIM3-214ENST00000536344 TEX15Q9BXT5 2789 aa16.71■□□□□ 0.27
TRIM3-214ENST00000536344 CKS1BP61024 79 aa16.71■□□□□ 0.27
TRIM3-214ENST00000536344 OR9G4Q8NGQ1 327 aa16.71■□□□□ 0.27
TRIM3-214ENST00000536344 Q9H3A6 140 aa16.71■□□□□ 0.27
TRIM3-214ENST00000536344 SIGLEC8Q9NYZ4 499 aa16.71■□□□□ 0.27
TRIM3-214ENST00000536344 ETDBQ3ZM63 59 aa16.7■□□□□ 0.26
TRIM3-214ENST00000536344 ARPC1AQ92747 370 aa16.7■□□□□ 0.26
TRIM3-214ENST00000536344 PIMREGQ9BSJ6 248 aa16.7■□□□□ 0.26
TRIM3-214ENST00000536344 GFRA4Q9GZZ7 299 aa16.7■□□□□ 0.26
TRIM3-214ENST00000536344 ZNF492Q9P255 531 aa16.7■□□□□ 0.26
TRIM3-214ENST00000536344 A0A1B0GUT8 65 aa16.7■□□□□ 0.26
TRIM3-214ENST00000536344 TMEM189A5PLL7 270 aa16.7■□□□□ 0.26
TRIM3-214ENST00000536344 NDPQ00604 133 aa16.7■□□□□ 0.26
TRIM3-214ENST00000536344 EXOC3-AS1Q8N2X6 119 aa16.7■□□□□ 0.26
TRIM3-214ENST00000536344 VGLL1Q99990 258 aa16.7■□□□□ 0.26
TRIM3-214ENST00000536344 KRTAP10-9P60411 292 aa16.69■□□□□ 0.26
TRIM3-214ENST00000536344 C10orf105Q8TEF2 133 aa16.69■□□□□ 0.26
TRIM3-214ENST00000536344 SPAG8Q99932 426 aaPredicted RBP16.69■□□□□ 0.26
TRIM3-214ENST00000536344 SPANXB1Q9NS25 103 aaPredicted RBP16.69■□□□□ 0.26
TRIM3-214ENST00000536344 NPIPB6E9PJ23 425 aa16.69■□□□□ 0.26
TRIM3-214ENST00000536344 CRYBA4P53673 196 aa16.69■□□□□ 0.26
TRIM3-214ENST00000536344 AMTNQ6UX39 209 aa16.69■□□□□ 0.26
TRIM3-214ENST00000536344 OR4X2Q8NGF9 303 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms