RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 PSMF1Q92530 271 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 AP1S3Q96PC3 154 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 CST9LQ9H4G1 147 aa1.38□□□□□ -2.19
PTPN12-213ENST00000519553 TRAV27A0A087WT01 109 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.37□□□□□ -2.19
PTPN12-213ENST00000519553 hDV103S1A0JD37 113 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 C2orf70A6NJV1 201 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 J3QR89 54 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 MRPS14O60783 128 aaKnown RBP1.37□□□□□ -2.19
PTPN12-213ENST00000519553 CRPP02741 224 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 HLA-DRB4P13762 266 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 RPS25P62851 125 aaKnown RBP1.37□□□□□ -2.19
PTPN12-213ENST00000519553 DIAPH2-AS1Q14236 149 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 DEFB113Q30KQ7 82 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 ASB16-AS1Q495Z4 193 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 C1orf134Q5TEV5 83 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 KRTAP26-1Q6PEX3 210 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 TEN1Q86WV5 123 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 LINC00311Q8N616 119 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 OR2T35Q8NGX2 323 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 C2orf88Q9BSF0 95 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 TPRKBQ9Y3C4 175 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 HLA-DRB4X5D2U9 266 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 CDK5RAP2Q96SN8 1893 aa1.37□□□□□ -2.19
PTPN12-213ENST00000519553 COL1A1P02452 1464 aaPredicted RBP1.37□□□□□ -2.19
PTPN12-213ENST00000519553 MYLKQ15746 1914 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 TANC2Q9HCD6 1990 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 M0R233 179 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 SMIM24O75264 130 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 LINC00694P0DN24 101 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 KDM5CP41229 1560 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 CDK6Q00534 326 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 TNS3Q68CZ2 1445 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 ARPINQ7Z6K5 226 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 CTAGE3PQ8IX95 158 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 TMEM254Q8TBM7 123 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 SFT2D1Q8WV19 159 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 MUCL1Q96DR8 90 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 OR4C12Q96R67 309 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 LPAR5Q9H1C0 372 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 BANF2Q9H503 90 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 CHCHD2Q9Y6H1 151 aaPredicted RBP1.36□□□□□ -2.19
PTPN12-213ENST00000519553 BCL9LQ86UU0 1499 aa1.36□□□□□ -2.19
PTPN12-213ENST00000519553 TMEM2Q9UHN6 1383 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 MICAL3Q7RTP6 2002 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 ARHGAP31Q2M1Z3 1444 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 IGKV2-40A0A087WW87 121 aaPredicted RBP1.35□□□□□ -2.19
PTPN12-213ENST00000519553 A0A1B0GV90 55 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 LOC107986453A0A1B0GWG9 222 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 TCRBV4S1A1TA0A5B7 111 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 CCDC160A6NGH7 325 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 LINC00587B1AMM8 73 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 NPFFO15130 113 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 DLEU1O43261 78 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 IGKV2D-40P01614 121 aaPredicted RBP1.35□□□□□ -2.19
PTPN12-213ENST00000519553 TRACP01848 142 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 FREM3P0C091 2139 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 HIST1H1BP16401 226 aaKnown RBP1.35□□□□□ -2.19
PTPN12-213ENST00000519553 RRAS2P62070 204 aaPredicted RBP1.35□□□□□ -2.19
PTPN12-213ENST00000519553 BLCAPP62952 87 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 LINC00269Q8N2A0 174 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 CLEC2BQ92478 149 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 RAB37Q96AX2 223 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 TP53RKQ96S44 253 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 NABP2Q9BQ15 211 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 LINC00470Q9BZP3 86 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 METTL1Q9UBP6 276 aaKnown RBP1.35□□□□□ -2.19
PTPN12-213ENST00000519553 TNFSF18Q9UNG2 199 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 DNAJC15Q9Y5T4 150 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 WDR97A6NE52 1622 aa1.35□□□□□ -2.19
PTPN12-213ENST00000519553 ZFC3H1O60293 1989 aaKnown RBP1.35□□□□□ -2.19
PTPN12-213ENST00000519553 APOC1P02654 83 aa1.34□□□□□ -2.19
PTPN12-213ENST00000519553 SLC25A4P12235 298 aa1.34□□□□□ -2.19
PTPN12-213ENST00000519553 COPZ1P61923 177 aa1.34□□□□□ -2.19
PTPN12-213ENST00000519553 SNRPD3P62318 126 aaKnown RBP1.34□□□□□ -2.19
PTPN12-213ENST00000519553 CNBPP62633 177 aaKnown RBP1.34□□□□□ -2.19
PTPN12-213ENST00000519553 EMX2Q04743 252 aa1.34□□□□□ -2.19
PTPN12-213ENST00000519553 C1orf137Q5JT78 98 aa1.34□□□□□ -2.19
PTPN12-213ENST00000519553 GLIPR1L1Q6UWM5 242 aa1.34□□□□□ -2.19
PTPN12-213ENST00000519553 C2orf82Q6UX34 121 aa1.34□□□□□ -2.19
PTPN12-213ENST00000519553 ZNF833PQ6ZTB9 187 aa1.34□□□□□ -2.19
PTPN12-213ENST00000519553 RPS19BP1Q86WX3 136 aaKnown RBP1.34□□□□□ -2.19
PTPN12-213ENST00000519553 Q8N2B8 174 aa1.34□□□□□ -2.19
PTPN12-213ENST00000519553 C15orf53Q8NAA6 179 aa1.34□□□□□ -2.19
PTPN12-213ENST00000519553 ARL11Q969Q4 196 aa1.34□□□□□ -2.19
PTPN12-213ENST00000519553 SLC35B3Q9H1N7 401 aa1.34□□□□□ -2.19
PTPN12-213ENST00000519553 GRIN2AQ12879 1464 aa1.34□□□□□ -2.19
PTPN12-213ENST00000519553 PCDH15Q96QU1 1955 aa1.34□□□□□ -2.2
PTPN12-213ENST00000519553 SYNJ1O43426 1573 aa1.34□□□□□ -2.2
PTPN12-213ENST00000519553 MUC4Q99102 2169 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 COL24A1Q17RW2 1714 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 IGKV3-7A0A075B6H7 116 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 TRAV10A0A0B4J240 114 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 PNMA8CA0A1B0GUJ8 204 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 A6NN06 94 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 MIF4GDA9UHW6 222 aaKnown RBP1.33□□□□□ -2.2
PTPN12-213ENST00000519553 ZNF670-ZNF695F2Z2N8 137 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 K7ERU9 68 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 ERC2-IT1O76042 136 aa1.33□□□□□ -2.2
PTPN12-213ENST00000519553 CIRBPQ14011 172 aaKnown RBP1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms