RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 RAB9BQ9NP90 201 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 OTORQ9NRC9 128 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 MRPL35Q9NZE8 188 aaKnown RBP6.01□□□□□ -1.45
NEDD9-208ENST00000504387 ZNF492Q9P255 531 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 CTSZQ9UBR2 303 aa6.01□□□□□ -1.45
NEDD9-208ENST00000504387 RAI1Q7Z5J4 1906 aaPredicted RBP6□□□□□ -1.45
NEDD9-208ENST00000504387 FCN3O75636 299 aa6□□□□□ -1.45
NEDD9-208ENST00000504387 APOMO95445 188 aa6□□□□□ -1.45
NEDD9-208ENST00000504387 EGR2P11161 476 aaPredicted RBP6□□□□□ -1.45
NEDD9-208ENST00000504387 ZNF80P51504 273 aaPredicted RBP6□□□□□ -1.45
NEDD9-208ENST00000504387 CR1LQ2VPA4 569 aa6□□□□□ -1.45
NEDD9-208ENST00000504387 LGALS9BQ3B8N2 356 aa6□□□□□ -1.45
NEDD9-208ENST00000504387 LGALS9CQ6DKI2 356 aa6□□□□□ -1.45
NEDD9-208ENST00000504387 SEM1Q6ZVN7 128 aa6□□□□□ -1.45
NEDD9-208ENST00000504387 SYT8Q8NBV8 401 aa6□□□□□ -1.45
NEDD9-208ENST00000504387 ZNF436-AS1Q8NC38 126 aaPredicted RBP6□□□□□ -1.45
NEDD9-208ENST00000504387 NGBQ9NPG2 151 aa6□□□□□ -1.45
NEDD9-208ENST00000504387 SOX21Q9Y651 276 aaPredicted RBP6□□□□□ -1.45
NEDD9-208ENST00000504387 CHD8Q9HCK8 2581 aa6□□□□□ -1.45
NEDD9-208ENST00000504387 BMI1P35226 326 aa6□□□□□ -1.45
NEDD9-208ENST00000504387 BSPH1Q075Z2 132 aa6□□□□□ -1.45
NEDD9-208ENST00000504387 GAGE13Q4V321 117 aa6□□□□□ -1.45
NEDD9-208ENST00000504387 TMEM167AQ8TBQ9 72 aa6□□□□□ -1.45
NEDD9-208ENST00000504387 GEMIN7Q9H840 131 aaKnown RBP6□□□□□ -1.45
NEDD9-208ENST00000504387 SPANXB1Q9NS25 103 aaPredicted RBP6□□□□□ -1.45
NEDD9-208ENST00000504387 SS18L2Q9UHA2 77 aa6□□□□□ -1.45
NEDD9-208ENST00000504387 IGLL5B9A064 214 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 H7C2G1 150 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 IGLV2-23P01705 113 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 IGKCP01834 107 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 PSMB2P49721 201 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 ZNF562Q6V9R5 426 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 ONECUT1Q9UBC0 465 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 SORL1Q92673 2214 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 WI2-2373I1.2A0A1W2PRP0 233 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 LHBP01229 141 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 GFRALQ6UXV0 394 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 PRSS33Q8NF86 280 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 GFRA4Q9GZZ7 299 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 TRBV19A0A075B6N1 114 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 J3QR89 54 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 NDUFS8O00217 210 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 IGKV1-17P01599 117 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 MT-ATP8P03928 68 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 ZNF883P0CG24 379 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 CT83Q5H943 113 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 ZNF833PQ6ZTB9 187 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 RNF182Q8N6D2 247 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 THAP8Q8NA92 274 aa5.99□□□□□ -1.45
NEDD9-208ENST00000504387 FAM90A27PA6NNH2 459 aa5.98□□□□□ -1.45
NEDD9-208ENST00000504387 OVOL3O00110 214 aa5.98□□□□□ -1.45
NEDD9-208ENST00000504387 IGHG3P01860 377 aa5.98□□□□□ -1.45
NEDD9-208ENST00000504387 SPINK8P0C7L1 97 aa5.98□□□□□ -1.45
NEDD9-208ENST00000504387 C12orf74Q32Q52 190 aa5.98□□□□□ -1.45
NEDD9-208ENST00000504387 ZFP2Q6ZN57 461 aa5.98□□□□□ -1.45
NEDD9-208ENST00000504387 CEND1Q8N111 149 aa5.98□□□□□ -1.45
NEDD9-208ENST00000504387 MAP1LC3AQ9H492 121 aa5.98□□□□□ -1.45
NEDD9-208ENST00000504387 AAMDCQ9H7C9 122 aa5.98□□□□□ -1.45
NEDD9-208ENST00000504387 FAM215AQ9Y5M1 114 aa5.98□□□□□ -1.45
NEDD9-208ENST00000504387 ODF1Q14990 250 aa5.98□□□□□ -1.45
NEDD9-208ENST00000504387 FOXI2Q6ZQN5 318 aa5.98□□□□□ -1.45
NEDD9-208ENST00000504387 C1orf122Q6ZSJ8 110 aa5.98□□□□□ -1.45
NEDD9-208ENST00000504387 TRGV9Q99603 122 aa5.98□□□□□ -1.45
NEDD9-208ENST00000504387 MRPL16Q9NX20 251 aaKnown RBP5.98□□□□□ -1.45
NEDD9-208ENST00000504387 NCBP2LA6PVI3 153 aaKnown RBP5.97□□□□□ -1.45
NEDD9-208ENST00000504387 TNFRSF6BO95407 300 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 IGLV1-44P01699 117 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 TRGV3P03979 118 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 SIGLEC15Q6ZMC9 328 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 C1orf162Q8NEQ5 155 aaPredicted RBP5.97□□□□□ -1.45
NEDD9-208ENST00000504387 VKORC1Q9BQB6 163 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 SCNM1Q9BWG6 230 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 PGPEP1Q9NXJ5 209 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 HHLA3Q9XRX5 114 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 VSTM5A8MXK1 200 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 SMIM17P0DL12 118 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 HLA-DRB4P13762 266 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 SCGB1D4Q6XE38 83 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 PPP1R27Q86WC6 154 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 LINC01560Q8TB33 94 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 ZNF502Q8TBZ5 544 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 RPEQ96AT9 228 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 RNF125Q96EQ8 232 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 HIF1ANQ9NWT6 349 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 LINC00312Q9Y6C7 94 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 HLA-DRB4X5D2U9 266 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 SPTBN4Q9H254 2564 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 IGKV3-7A0A075B6H7 116 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 TMEM238LA0A1B0GVL6 79 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 SRSF9Q13242 221 aaKnown RBP eCLIP5.97□□□□□ -1.45
NEDD9-208ENST00000504387 PRR30Q53SZ7 412 aaPredicted RBP5.97□□□□□ -1.45
NEDD9-208ENST00000504387 KLHL30-AS1Q8NEE0 82 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 KIR2DL4Q99706 377 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 SIGLEC9Q9Y336 463 aa5.97□□□□□ -1.45
NEDD9-208ENST00000504387 C17orf100A8MU93 164 aa5.96□□□□□ -1.46
NEDD9-208ENST00000504387 TTC9CQ8N5M4 171 aa5.96□□□□□ -1.46
NEDD9-208ENST00000504387 LINC01549A6NIU2 74 aa5.96□□□□□ -1.46
NEDD9-208ENST00000504387 PRAC2D3DTV9 90 aa5.96□□□□□ -1.46
NEDD9-208ENST00000504387 DPM2O94777 84 aa5.96□□□□□ -1.46
NEDD9-208ENST00000504387 RNF183Q96D59 192 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms