RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 RPL7P18124 248 aaKnown RBP0.29□□□□□ -2.36
CDC42SE2-204ENST00000502639 OR4C12Q96R67 309 aa0.29□□□□□ -2.36
CDC42SE2-204ENST00000502639 SMR3AQ99954 134 aa0.29□□□□□ -2.36
CDC42SE2-204ENST00000502639 KRTAP2-4Q9BYR9 128 aa0.29□□□□□ -2.36
CDC42SE2-204ENST00000502639 KRTAP2-1Q9BYU5 128 aa0.29□□□□□ -2.36
CDC42SE2-204ENST00000502639 PCBD2Q9H0N5 130 aa0.29□□□□□ -2.36
CDC42SE2-204ENST00000502639 CST11Q9H112 138 aa0.29□□□□□ -2.36
CDC42SE2-204ENST00000502639 CTTNBP2Q8WZ74 1663 aa0.29□□□□□ -2.36
CDC42SE2-204ENST00000502639 KNTC1P50748 2209 aa0.29□□□□□ -2.36
CDC42SE2-204ENST00000502639 ADGBQ8N7X0 1667 aa0.28□□□□□ -2.36
CDC42SE2-204ENST00000502639 A0A096LPI6 279 aa0.28□□□□□ -2.36
CDC42SE2-204ENST00000502639 ZNF727A8MUV8 499 aa0.28□□□□□ -2.36
CDC42SE2-204ENST00000502639 IGHV3-33P01772 117 aa0.28□□□□□ -2.36
CDC42SE2-204ENST00000502639 RPL37AP61513 92 aaKnown RBP0.28□□□□□ -2.36
CDC42SE2-204ENST00000502639 VBP1P61758 197 aa0.28□□□□□ -2.36
CDC42SE2-204ENST00000502639 NEDD8Q15843 81 aa0.28□□□□□ -2.36
CDC42SE2-204ENST00000502639 CSAG1Q6PB30 78 aa0.28□□□□□ -2.36
CDC42SE2-204ENST00000502639 CLEC2BQ92478 149 aa0.28□□□□□ -2.36
CDC42SE2-204ENST00000502639 CCL19Q99731 98 aa0.28□□□□□ -2.36
CDC42SE2-204ENST00000502639 NABP2Q9BQ15 211 aa0.28□□□□□ -2.36
CDC42SE2-204ENST00000502639 TRAPPC2LQ9UL33 140 aa0.28□□□□□ -2.36
CDC42SE2-204ENST00000502639 TPRKBQ9Y3C4 175 aa0.28□□□□□ -2.36
CDC42SE2-204ENST00000502639 PIK3C2AO00443 1686 aa0.27□□□□□ -2.37
CDC42SE2-204ENST00000502639 FAT4Q6V0I7 4981 aa0.27□□□□□ -2.37
CDC42SE2-204ENST00000502639 LOC107984156A0A0G2JMH3 177 aa0.27□□□□□ -2.37
CDC42SE2-204ENST00000502639 TRBV30A0A0K0K1B3 111 aa0.27□□□□□ -2.37
CDC42SE2-204ENST00000502639 C3orf85A0A1B0GTC6 90 aa0.27□□□□□ -2.37
CDC42SE2-204ENST00000502639 SPINT3P49223 89 aa0.27□□□□□ -2.37
CDC42SE2-204ENST00000502639 FOXA3P55318 350 aaPredicted RBP0.27□□□□□ -2.37
CDC42SE2-204ENST00000502639 ARL17AQ8IVW1 177 aa0.27□□□□□ -2.37
CDC42SE2-204ENST00000502639 OR5H6Q8NGV6 325 aa0.27□□□□□ -2.37
CDC42SE2-204ENST00000502639 PLAC4Q8WY50 150 aa0.27□□□□□ -2.37
CDC42SE2-204ENST00000502639 LPAR5Q9H1C0 372 aa0.27□□□□□ -2.37
CDC42SE2-204ENST00000502639 TCEAL2Q9H3H9 227 aaPredicted RBP0.27□□□□□ -2.37
CDC42SE2-204ENST00000502639 TRAPPC8Q9Y2L5 1435 aa0.27□□□□□ -2.37
CDC42SE2-204ENST00000502639 A0A0J9YY99 117 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 BCL2P10415 239 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 PDE6GP18545 87 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 SDC2P34741 201 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 QRFPP83859 136 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 SPINK9Q5DT21 86 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 C6orf52Q5T4I8 152 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 LINC00305Q7Z4B0 112 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 CROCCP2Q86T23 111 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 C5orf17Q8NAS9 161 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 THEM6Q8WUY1 208 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 PRELID3AQ96N28 172 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 FAM103A1Q9BTL3 118 aaKnown RBP0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 EFCAB11Q9BUY7 163 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 FAM135BQ49AJ0 1406 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 YTHDC2Q9H6S0 1430 aaKnown RBP0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 PBRM1Q86U86 1689 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 TRPM7Q96QT4 1865 aa0.26□□□□□ -2.37
CDC42SE2-204ENST00000502639 ANK1P16157 1881 aa0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 USP54Q70EL1 1684 aa0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 DLC1Q96QB1 1528 aa0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 KIAA1107Q9UPP5 1409 aa0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 A0A1W2PRS3 328 aa0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 M0QZK8 103 aa0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 LY6G6CO95867 125 aa0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 RPS3P23396 243 aaKnown RBP eCLIP0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 S100A5P33763 92 aa0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 POLR2HP52434 150 aaKnown RBP0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 MAXP61244 160 aa0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 MRPS36P82909 103 aaKnown RBP0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 OR4B1Q8NGF8 309 aa0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 GRPEL2Q8TAA5 225 aa0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 SMPXQ9UHP9 88 aa0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 MED31Q9Y3C7 131 aa0.25□□□□□ -2.37
CDC42SE2-204ENST00000502639 FER1L6Q2WGJ9 1857 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 LOC285556D6RIA3 1793 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 TCOF1Q13428 1488 aaKnown RBP0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 FGD6Q6ZV73 1430 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 ROCK1Q13464 1354 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 TRBV27A0A0K0K1C4 114 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 LOC107984640A0A0U1RRK4 108 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 C5orf58C9J3I9 102 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 TRACP01848 142 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 SLC25A4P12235 298 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 ZNF137PP52743 207 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 CASC2Q6XLA1 102 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 Q6ZQY7 126 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 ISOC1Q96CN7 298 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 CCDC32Q9BV29 185 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 CBLN4Q9NTU7 201 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 COMMD3Q9UBI1 195 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 MAST4O15021 2626 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 PCLOQ9Y6V0 5065 aa0.24□□□□□ -2.37
CDC42SE2-204ENST00000502639 NINQ8N4C6 2090 aa0.23□□□□□ -2.37
CDC42SE2-204ENST00000502639 DSPPQ9NZW4 1301 aa0.23□□□□□ -2.37
CDC42SE2-204ENST00000502639 KIAA1549LQ6ZVL6 1849 aa0.23□□□□□ -2.37
CDC42SE2-204ENST00000502639 TRAV13-1A0A0B4J241 112 aa0.23□□□□□ -2.37
CDC42SE2-204ENST00000502639 H3BMG7 143 aa0.23□□□□□ -2.37
CDC42SE2-204ENST00000502639 PGRMC1O00264 195 aaKnown RBP0.23□□□□□ -2.37
CDC42SE2-204ENST00000502639 CDC42EP2O14613 210 aa0.23□□□□□ -2.37
CDC42SE2-204ENST00000502639 TPT1P13693 172 aaKnown RBP0.23□□□□□ -2.37
CDC42SE2-204ENST00000502639 CRYGSP22914 178 aa0.23□□□□□ -2.37
CDC42SE2-204ENST00000502639 KDELR1P24390 212 aa0.23□□□□□ -2.37
CDC42SE2-204ENST00000502639 NDUFA6P56556 154 aa0.23□□□□□ -2.37
CDC42SE2-204ENST00000502639 LINC00299Q6ZSB3 139 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms