RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
CDC42SE2-204ENST00000502639 CHIC1Q5VXU3 224 aa22.78■■□□□ 1.24
CDC42SE2-204ENST00000502639 SENP3Q9H4L4 574 aaPredicted RBP20.71■□□□□ 0.91
CDC42SE2-204ENST00000502639 PHF23Q9BUL5 403 aaPredicted RBP20.47■□□□□ 0.87
CDC42SE2-204ENST00000502639 FOXD1Q16676 465 aa19.45■□□□□ 0.7
CDC42SE2-204ENST00000502639 POTEDQ86YR6 584 aa18.39■□□□□ 0.53
CDC42SE2-204ENST00000502639 MSH5O43196 834 aa18.19■□□□□ 0.5
CDC42SE2-204ENST00000502639 PIAS4Q8N2W9 510 aaPredicted RBP18.05■□□□□ 0.48
CDC42SE2-204ENST00000502639 PPP6R1Q9UPN7 881 aa18.01■□□□□ 0.47
CDC42SE2-204ENST00000502639 PLPPR3Q6T4P5 718 aa18■□□□□ 0.47
CDC42SE2-204ENST00000502639 ADRA2BP18089 450 aa17.91■□□□□ 0.46
CDC42SE2-204ENST00000502639 MAPK8IP2Q13387 824 aaPredicted RBP16.57■□□□□ 0.24
CDC42SE2-204ENST00000502639 DMRT2Q9Y5R5 561 aa16.41■□□□□ 0.22
CDC42SE2-204ENST00000502639 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
CDC42SE2-204ENST00000502639 PPP4R3CPQ6ZMV5 832 aa15.86■□□□□ 0.13
CDC42SE2-204ENST00000502639 CACNB1Q02641 598 aaPredicted RBP15.84■□□□□ 0.13
CDC42SE2-204ENST00000502639 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
CDC42SE2-204ENST00000502639 KCNA4P22459 653 aa15.71■□□□□ 0.11
CDC42SE2-204ENST00000502639 HOXD11P31277 338 aaPredicted RBP15.69■□□□□ 0.1
CDC42SE2-204ENST00000502639 RNF39Q9H2S5 420 aa15.56■□□□□ 0.08
CDC42SE2-204ENST00000502639 CNKSR2Q8WXI2 1034 aa15.52■□□□□ 0.08
CDC42SE2-204ENST00000502639 RNF216Q9NWF9 866 aaPredicted RBP15.46■□□□□ 0.07
CDC42SE2-204ENST00000502639 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
CDC42SE2-204ENST00000502639 NPM3O75607 178 aaKnown RBP15.28■□□□□ 0.04
CDC42SE2-204ENST00000502639 C1QBPQ07021 282 aaKnown RBP15.25■□□□□ 0.03
CDC42SE2-204ENST00000502639 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
CDC42SE2-204ENST00000502639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.92□□□□□ -0.02
CDC42SE2-204ENST00000502639 SLC4A1APQ9BWU0 796 aaKnown RBP14.91□□□□□ -0.02
CDC42SE2-204ENST00000502639 EHMT2Q96KQ7 1210 aa14.69□□□□□ -0.06
CDC42SE2-204ENST00000502639 U3KPZ7 1027 aaPredicted RBP14.65□□□□□ -0.06
CDC42SE2-204ENST00000502639 SPINK5Q9NQ38 1064 aaPredicted RBP14.56□□□□□ -0.08
CDC42SE2-204ENST00000502639 ZBTB22O15209 634 aa14.52□□□□□ -0.09
CDC42SE2-204ENST00000502639 CSRNP3Q8WYN3 585 aa14.52□□□□□ -0.09
CDC42SE2-204ENST00000502639 DSG3P32926 999 aa14.49□□□□□ -0.09
CDC42SE2-204ENST00000502639 CAPN15O75808 1086 aa14.47□□□□□ -0.09
CDC42SE2-204ENST00000502639 SLC4A2P04920 1241 aa14.44□□□□□ -0.1
CDC42SE2-204ENST00000502639 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
CDC42SE2-204ENST00000502639 POTEHQ6S545 545 aa14.31□□□□□ -0.12
CDC42SE2-204ENST00000502639 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
CDC42SE2-204ENST00000502639 ABCB7O75027 752 aa14.16□□□□□ -0.14
CDC42SE2-204ENST00000502639 ZNF219Q9P2Y4 722 aaPredicted RBP14.05□□□□□ -0.16
CDC42SE2-204ENST00000502639 MYCNP04198 464 aaPredicted RBP14.04□□□□□ -0.16
CDC42SE2-204ENST00000502639 APLP2Q06481 763 aa13.99□□□□□ -0.17
CDC42SE2-204ENST00000502639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
CDC42SE2-204ENST00000502639 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
CDC42SE2-204ENST00000502639 SAMD1Q6SPF0 538 aaPredicted RBP13.9□□□□□ -0.18
CDC42SE2-204ENST00000502639 ATXN8OSP0DMR3 200 aa13.8□□□□□ -0.2
CDC42SE2-204ENST00000502639 ATF5Q9Y2D1 282 aaPredicted RBP13.8□□□□□ -0.2
CDC42SE2-204ENST00000502639 POLA2Q14181 598 aa13.73□□□□□ -0.21
CDC42SE2-204ENST00000502639 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
CDC42SE2-204ENST00000502639 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
CDC42SE2-204ENST00000502639 AKT1S1Q96B36 256 aa13.38□□□□□ -0.27
CDC42SE2-204ENST00000502639 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
CDC42SE2-204ENST00000502639 REM2Q8IYK8 340 aaPredicted RBP13.31□□□□□ -0.28
CDC42SE2-204ENST00000502639 ZBTB12Q9Y330 459 aaPredicted RBP13.29□□□□□ -0.28
CDC42SE2-204ENST00000502639 PIP4P2Q8N4L2 257 aa13.26□□□□□ -0.29
CDC42SE2-204ENST00000502639 SP7Q8TDD2 431 aaPredicted RBP13.26□□□□□ -0.29
CDC42SE2-204ENST00000502639 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
CDC42SE2-204ENST00000502639 MKRN4PQ13434 485 aaPredicted RBP13.19□□□□□ -0.3
CDC42SE2-204ENST00000502639 FXR2P51116 673 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDC42SE2-204ENST00000502639 HAX1O00165 279 aa13.07□□□□□ -0.32
CDC42SE2-204ENST00000502639 FKBP8Q14318 412 aa13.04□□□□□ -0.32
CDC42SE2-204ENST00000502639 FBLN2P98095 1184 aa13.02□□□□□ -0.33
CDC42SE2-204ENST00000502639 EVX2Q03828 476 aa13.02□□□□□ -0.33
CDC42SE2-204ENST00000502639 SPDYE2BA6NHP3 402 aa12.92□□□□□ -0.34
CDC42SE2-204ENST00000502639 SPDYE6P0CI01 402 aa12.92□□□□□ -0.34
CDC42SE2-204ENST00000502639 SPDYE2Q495Y8 402 aa12.92□□□□□ -0.34
CDC42SE2-204ENST00000502639 SPDYE4A6NLX3 237 aa12.87□□□□□ -0.35
CDC42SE2-204ENST00000502639 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
CDC42SE2-204ENST00000502639 PRKAR2AP13861 404 aaKnown RBP12.82□□□□□ -0.36
CDC42SE2-204ENST00000502639 SPDYE1Q8NFV5 336 aaPredicted RBP12.77□□□□□ -0.37
CDC42SE2-204ENST00000502639 SSUH2Q9Y2M2 353 aa12.76□□□□□ -0.37
CDC42SE2-204ENST00000502639 PROM2Q8N271 834 aa12.75□□□□□ -0.37
CDC42SE2-204ENST00000502639 ZNF692Q9BU19 519 aaPredicted RBP12.75□□□□□ -0.37
CDC42SE2-204ENST00000502639 C19orf67A6NJJ6 358 aa12.71□□□□□ -0.37
CDC42SE2-204ENST00000502639 CHADLQ6NUI6 762 aa12.67□□□□□ -0.38
CDC42SE2-204ENST00000502639 GABBR2O75899 941 aa12.6□□□□□ -0.39
CDC42SE2-204ENST00000502639 PABPN1Q86U42 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDC42SE2-204ENST00000502639 PRR29P0C7W0 189 aa12.53□□□□□ -0.4
CDC42SE2-204ENST00000502639 LHX8Q68G74 356 aa12.45□□□□□ -0.42
CDC42SE2-204ENST00000502639 FBXO3Q9UK99 471 aa12.44□□□□□ -0.42
CDC42SE2-204ENST00000502639 POTEIP0CG38 1075 aa12.41□□□□□ -0.42
CDC42SE2-204ENST00000502639 CD44P16070 742 aaKnown RBP12.39□□□□□ -0.43
CDC42SE2-204ENST00000502639 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
CDC42SE2-204ENST00000502639 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
CDC42SE2-204ENST00000502639 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
CDC42SE2-204ENST00000502639 IFNLR1Q8IU57 520 aaPredicted RBP12.26□□□□□ -0.45
CDC42SE2-204ENST00000502639 CREBZFQ9NS37 354 aa12.22□□□□□ -0.45
CDC42SE2-204ENST00000502639 RTN4Q9NQC3 1192 aaKnown RBP12.18□□□□□ -0.46
CDC42SE2-204ENST00000502639 ZNF579Q8NAF0 562 aaKnown RBP12.17□□□□□ -0.46
CDC42SE2-204ENST00000502639 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
CDC42SE2-204ENST00000502639 MIER1Q8N108 512 aa12.16□□□□□ -0.46
CDC42SE2-204ENST00000502639 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
CDC42SE2-204ENST00000502639 CLCN6P51797 869 aa12.13□□□□□ -0.47
CDC42SE2-204ENST00000502639 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
CDC42SE2-204ENST00000502639 GALR2O43603 387 aaPredicted RBP12.12□□□□□ -0.47
CDC42SE2-204ENST00000502639 AMER1Q5JTC6 1135 aaPredicted RBP12.08□□□□□ -0.48
CDC42SE2-204ENST00000502639 KLHL34Q8N239 644 aa12.05□□□□□ -0.48
CDC42SE2-204ENST00000502639 MNX1P50219 401 aaPredicted RBP12.04□□□□□ -0.48
CDC42SE2-204ENST00000502639 PHF12Q96QT6 1004 aa12.03□□□□□ -0.48
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