RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 S4R3C0 116 aa3.82□□□□□ -1.8
NEAT1-202ENST00000501122 TRAV7A0A075B6U4 112 aa3.82□□□□□ -1.8
NEAT1-202ENST00000501122 IGKV1D-16P01601 117 aa3.82□□□□□ -1.8
NEAT1-202ENST00000501122 IGKV1-5P01602 117 aa3.82□□□□□ -1.8
NEAT1-202ENST00000501122 TMEM61Q8N0U2 210 aa3.82□□□□□ -1.8
NEAT1-202ENST00000501122 DAND5Q8N907 189 aa3.82□□□□□ -1.8
NEAT1-202ENST00000501122 IGHV5-10-1A0A0J9YXX1 117 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 PRR15LQ9BU68 103 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 QRFPP83859 136 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 DPH3P1Q9H4G8 78 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 DSCAMO60469 2012 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 ITSN1Q15811 1721 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 IGKV1D-33P01593 117 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 IGKV1-33P01594 117 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 HRKO00198 91 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 MIFP14174 115 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 SOSTDC1Q6X4U4 206 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 ZNRF1Q8ND25 227 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 SCRG1O75711 98 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 EFNA4P52798 201 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 FAM120AOSQ5T036 256 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 CRIPAKQ8N1N5 446 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 PMS2P5A8MQ11 134 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 C2orf91Q6ZV80 131 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 MIA3Q5JRA6 1907 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 TRBV7-1A0A0A6YYK4 115 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 TIRAPP58753 221 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 PATE1Q8WXA2 126 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 PLXND1Q9Y4D7 1925 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 TRGV5A0A0B4J1U4 118 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 FAM60AQ9NP50 221 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 RNF7Q9UBF6 113 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 TP53TG1Q9Y2A0 90 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 C15orf61A6NNL5 157 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 WFDC5Q8TCV5 224 aa3.81□□□□□ -1.8
NEAT1-202ENST00000501122 TMEM256-PLSCR3K7ERE1 68 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 IGLV3-27P01718 113 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 IGHV3-23P01764 117 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 IGKV2-40A0A087WW87 121 aaPredicted RBP3.8□□□□□ -1.8
NEAT1-202ENST00000501122 IGKV2D-40P01614 121 aaPredicted RBP3.8□□□□□ -1.8
NEAT1-202ENST00000501122 LPAL2Q16609 132 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 TTTY13Q9BZ97 58 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 TRIP6Q15654 476 aaKnown RBP3.8□□□□□ -1.8
NEAT1-202ENST00000501122 TRBV7-6A0A0J9YX20 115 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 IQGAP3Q86VI3 1631 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 CHD2O14647 1828 aaKnown RBP3.8□□□□□ -1.8
NEAT1-202ENST00000501122 ZNF561-AS1K7EIQ3 104 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 IGHV1-8P0DP01 117 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 ZCCHC24Q8N2G6 241 aaKnown RBP3.8□□□□□ -1.8
NEAT1-202ENST00000501122 CEP152O94986 1710 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 IGHV3OR16-8A0A075B7F1 116 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 IGKV1-9A0A0C4DH69 117 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 F8WEM9 126 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 GNLYP22749 145 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 GBF1Q92538 1859 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 TMEM133Q9H2Q1 129 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 ZFP36L1Q07352 338 aaKnown RBP3.8□□□□□ -1.8
NEAT1-202ENST00000501122 RNASE13Q5GAN3 156 aaKnown RBP3.8□□□□□ -1.8
NEAT1-202ENST00000501122 CAMSAP1Q5T5Y3 1602 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 ABCA9Q8IUA7 1624 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 IGHV1-58A0A0C4DH39 117 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 TRBV27A0A0K0K1C4 114 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 PLA2G5P39877 138 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 MYO5BQ9ULV0 1848 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 NKAPP1Q8N9T2 125 aa3.8□□□□□ -1.8
NEAT1-202ENST00000501122 MAP2P11137 1827 aaKnown RBP3.79□□□□□ -1.8
NEAT1-202ENST00000501122 ALKQ9UM73 1620 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 APRG1Q8IVJ8 170 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 CRYGAP11844 174 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 WI2-2373I1.2A0A1W2PRP0 233 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 AJUBAQ96IF1 538 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 IGHV3-73A0A0B4J1V6 119 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 PRCDQ00LT1 54 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 GAFA1Q96PS6 74 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 CFPP27918 469 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 CELA2AP08217 269 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 PVRIGQ6DKI7 326 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 TMEM75Q8N9X5 138 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 SMIM2Q9BVW6 85 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 TRBV30A0A0K0K1B3 111 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 ABCA6Q8N139 1617 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 PKD1L2Q7Z442 2459 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 LRCOL1A6NCL2 159 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 TMEM223A0PJW6 202 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 OPRPNQ99935 248 aaPredicted RBP3.79□□□□□ -1.8
NEAT1-202ENST00000501122 KIF20BQ96Q89 1820 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 CXorf51AA0A1B0GTR3 108 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 MRPL53Q96EL3 112 aaKnown RBP3.79□□□□□ -1.8
NEAT1-202ENST00000501122 CCL26Q9Y258 94 aa3.79□□□□□ -1.8
NEAT1-202ENST00000501122 NDUFB1O75438 58 aa3.78□□□□□ -1.8
NEAT1-202ENST00000501122 FAM110DQ8TAY7 271 aaPredicted RBP3.78□□□□□ -1.8
NEAT1-202ENST00000501122 SHANK2-AS3Q9BTD1 123 aa3.78□□□□□ -1.8
NEAT1-202ENST00000501122 ZNF497Q6ZNH5 498 aa3.78□□□□□ -1.8
NEAT1-202ENST00000501122 FRMD6-AS1P0C7T7 363 aa3.78□□□□□ -1.8
NEAT1-202ENST00000501122 CCL13Q99616 98 aa3.78□□□□□ -1.8
NEAT1-202ENST00000501122 CDK5RAP2Q96SN8 1893 aa3.78□□□□□ -1.8
NEAT1-202ENST00000501122 NWD1Q149M9 1564 aa3.78□□□□□ -1.8
NEAT1-202ENST00000501122 FGF22Q9HCT0 170 aa3.78□□□□□ -1.8
NEAT1-202ENST00000501122 DIAPH2-AS1Q14236 149 aa3.78□□□□□ -1.8
NEAT1-202ENST00000501122 NOTCH2Q04721 2471 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms