RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 HTR1AP08908 422 aa2.54□□□□□ -2
SMC2-205ENST00000493955 PPP1R2P41236 205 aa2.54□□□□□ -2
SMC2-205ENST00000493955 HSPE1P61604 102 aaKnown RBP2.54□□□□□ -2
SMC2-205ENST00000493955 BRMS1LQ5PSV4 323 aa2.54□□□□□ -2
SMC2-205ENST00000493955 PPP1R2P3Q6NXS1 205 aa2.54□□□□□ -2
SMC2-205ENST00000493955 LCN15Q6UWW0 184 aa2.54□□□□□ -2
SMC2-205ENST00000493955 GOLT1AQ6ZVE7 132 aa2.54□□□□□ -2
SMC2-205ENST00000493955 TRAPPC6BQ86SZ2 158 aa2.54□□□□□ -2
SMC2-205ENST00000493955 GKN2Q86XP6 184 aa2.54□□□□□ -2
SMC2-205ENST00000493955 ZNF439Q8NDP4 499 aa2.54□□□□□ -2
SMC2-205ENST00000493955 WFDC11Q8NEX6 87 aa2.54□□□□□ -2
SMC2-205ENST00000493955 OR52R1Q8NGF1 315 aa2.54□□□□□ -2
SMC2-205ENST00000493955 CST9LQ9H4G1 147 aa2.54□□□□□ -2
SMC2-205ENST00000493955 FREM1Q5H8C1 2179 aa2.54□□□□□ -2
SMC2-205ENST00000493955 MED13LQ71F56 2210 aa2.54□□□□□ -2
SMC2-205ENST00000493955 ZGRF1Q86YA3 2104 aa2.53□□□□□ -2
SMC2-205ENST00000493955 A0A0D9SG52 128 aa2.53□□□□□ -2
SMC2-205ENST00000493955 IBA57-AS1B1ANH7 110 aa2.53□□□□□ -2
SMC2-205ENST00000493955 TNFP01375 233 aa2.53□□□□□ -2
SMC2-205ENST00000493955 PMP2P02689 132 aa2.53□□□□□ -2
SMC2-205ENST00000493955 CLPSP04118 112 aa2.53□□□□□ -2
SMC2-205ENST00000493955 GPX1P07203 203 aa2.53□□□□□ -2
SMC2-205ENST00000493955 SERPINB9P50453 376 aa2.53□□□□□ -2
SMC2-205ENST00000493955 LINC01554Q52M75 96 aa2.53□□□□□ -2
SMC2-205ENST00000493955 DPPA3Q6W0C5 159 aa2.53□□□□□ -2
SMC2-205ENST00000493955 C7orf65Q6ZTY9 151 aa2.53□□□□□ -2
SMC2-205ENST00000493955 AAED1Q7RTV5 226 aa2.53□□□□□ -2
SMC2-205ENST00000493955 C9orf163Q8N9P6 203 aa2.53□□□□□ -2
SMC2-205ENST00000493955 DDA1Q9BW61 102 aa2.53□□□□□ -2
SMC2-205ENST00000493955 RNF122Q9H9V4 155 aa2.53□□□□□ -2
SMC2-205ENST00000493955 SPTBN1Q01082 2364 aaKnown RBP2.53□□□□□ -2
SMC2-205ENST00000493955 FBN2P35556 2912 aa2.53□□□□□ -2
SMC2-205ENST00000493955 SPTAN1Q13813 2472 aaKnown RBP2.53□□□□□ -2
SMC2-205ENST00000493955 NCOA6Q14686 2063 aaPredicted RBP2.52□□□□□ -2.01
SMC2-205ENST00000493955 MEIKINA0A087WXM9 373 aa2.52□□□□□ -2.01
SMC2-205ENST00000493955 TRAPPC13A5PLN9 417 aa2.52□□□□□ -2.01
SMC2-205ENST00000493955 J3QRK9 145 aa2.52□□□□□ -2.01
SMC2-205ENST00000493955 YPEL3P61236 119 aaPredicted RBP2.52□□□□□ -2.01
SMC2-205ENST00000493955 MAXP61244 160 aa2.52□□□□□ -2.01
SMC2-205ENST00000493955 ZNF345Q14585 488 aa2.52□□□□□ -2.01
SMC2-205ENST00000493955 ARHGAP11BQ3KRB8 267 aa2.52□□□□□ -2.01
SMC2-205ENST00000493955 Q6ZRN7 208 aaPredicted RBP2.52□□□□□ -2.01
SMC2-205ENST00000493955 LCA10Q71F78 164 aa2.52□□□□□ -2.01
SMC2-205ENST00000493955 GPR146Q96CH1 333 aa2.52□□□□□ -2.01
SMC2-205ENST00000493955 OSTCQ9NRP0 149 aa2.52□□□□□ -2.01
SMC2-205ENST00000493955 LRRK2Q5S007 2527 aa2.52□□□□□ -2.01
SMC2-205ENST00000493955 UNC79Q9P2D8 2635 aa2.52□□□□□ -2.01
SMC2-205ENST00000493955 PDZD2O15018 2839 aa2.52□□□□□ -2.01
SMC2-205ENST00000493955 CLDN25C9JDP6 229 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 C19orf84I3L1E1 186 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 TCL1BO95988 128 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 RPL19P84098 196 aaKnown RBP2.51□□□□□ -2.01
SMC2-205ENST00000493955 KRR1Q13601 381 aaKnown RBP2.51□□□□□ -2.01
SMC2-205ENST00000493955 TMED4Q7Z7H5 227 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 COA5Q86WW8 74 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 SIGLECL1Q8N7X8 197 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 OR5A1Q8NGJ0 315 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 FAM172AQ8WUF8 416 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 NAT14Q8WUY8 206 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 SNRNP25Q9BV90 132 aaKnown RBP2.51□□□□□ -2.01
SMC2-205ENST00000493955 LHFPL6Q9Y693 200 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 DIDO1Q9BTC0 2240 aaKnown RBP2.51□□□□□ -2.01
SMC2-205ENST00000493955 MYO9AB2RTY4 2548 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 CRYBG3Q68DQ2 2970 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 ITPR2Q14571 2701 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 F8P00451 2351 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 CACNA1CQ13936 2221 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 HMGB3O15347 200 aaKnown RBP2.51□□□□□ -2.01
SMC2-205ENST00000493955 KHDC3LQ587J8 217 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 LYRM7Q5U5X0 104 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 TMEM35BQ8NCS4 154 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 FDCSPQ8NFU4 85 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 COX14Q96I36 57 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 MCEEQ96PE7 176 aa2.51□□□□□ -2.01
SMC2-205ENST00000493955 C2CD3Q4AC94 2353 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 AKAP9Q99996 3911 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 CSMD1Q96PZ7 3565 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 MYO7BQ6PIF6 2116 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 CSMD2Q7Z408 3487 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 CELSR1Q9NYQ6 3014 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 CELSR2Q9HCU4 2923 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 ANKRD17O75179 2603 aaKnown RBP2.5□□□□□ -2.01
SMC2-205ENST00000493955 CREBBPQ92793 2442 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 TRAV4A0A0B4J268 109 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 CXorf51AA0A1B0GTR3 108 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 MFSD11O43934 449 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 C1QBP02746 253 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 SDC4P31431 198 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 YIPF3Q9GZM5 350 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 PYCARDQ9ULZ3 195 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 AMMECR1Q9Y4X0 333 aaPredicted RBP2.5□□□□□ -2.01
SMC2-205ENST00000493955 OTOGQ6ZRI0 2925 aa2.5□□□□□ -2.01
SMC2-205ENST00000493955 FBN1P35555 2871 aaKnown RBP2.49□□□□□ -2.01
SMC2-205ENST00000493955 ABCA12Q86UK0 2595 aa2.49□□□□□ -2.01
SMC2-205ENST00000493955 DOPEY1Q5JWR5 2465 aa2.49□□□□□ -2.01
SMC2-205ENST00000493955 LRBAP50851 2863 aa2.49□□□□□ -2.01
SMC2-205ENST00000493955 TRBV19A0A075B6N1 114 aa2.49□□□□□ -2.01
SMC2-205ENST00000493955 PIRTP0C851 137 aa2.49□□□□□ -2.01
SMC2-205ENST00000493955 CRYGAP11844 174 aa2.49□□□□□ -2.01
SMC2-205ENST00000493955 COX6A1P12074 109 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms