RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 MDN1Q9NU22 5596 aa0.4□□□□□ -2.35
CD46-216ENST00000490278 PTPRDP23468 1912 aa0.4□□□□□ -2.35
CD46-216ENST00000490278 KCPQ6ZWJ8 1503 aa0.39□□□□□ -2.35
CD46-216ENST00000490278 C5orf58C9J3I9 102 aa0.39□□□□□ -2.35
CD46-216ENST00000490278 DCUN1D2Q6PH85 259 aa0.39□□□□□ -2.35
CD46-216ENST00000490278 C10orf111Q8N326 155 aa0.39□□□□□ -2.35
CD46-216ENST00000490278 OR5AK2Q8NH90 309 aa0.39□□□□□ -2.35
CD46-216ENST00000490278 PLAC4Q8WY50 150 aa0.39□□□□□ -2.35
CD46-216ENST00000490278 ROCK1Q13464 1354 aa0.39□□□□□ -2.35
CD46-216ENST00000490278 SYNMO15061 1565 aa0.39□□□□□ -2.35
CD46-216ENST00000490278 MAP1LC3B2A6NCE7 125 aa0.38□□□□□ -2.35
CD46-216ENST00000490278 A6NN06 94 aa0.38□□□□□ -2.35
CD46-216ENST00000490278 TRACP01848 142 aa0.38□□□□□ -2.35
CD46-216ENST00000490278 G0S2P27469 103 aa0.38□□□□□ -2.35
CD46-216ENST00000490278 ANGPTL5Q86XS5 388 aa0.38□□□□□ -2.35
CD46-216ENST00000490278 C5orf17Q8NAS9 161 aa0.38□□□□□ -2.35
CD46-216ENST00000490278 OR5H6Q8NGV6 325 aa0.38□□□□□ -2.35
CD46-216ENST00000490278 ZDBF2Q9HCK1 2354 aa0.37□□□□□ -2.35
CD46-216ENST00000490278 C3orf85A0A1B0GTC6 90 aa0.37□□□□□ -2.35
CD46-216ENST00000490278 GABARAPH6UMI1 98 aa0.37□□□□□ -2.35
CD46-216ENST00000490278 H7BYZ3 331 aa0.37□□□□□ -2.35
CD46-216ENST00000490278 IGHV3-30P01768 117 aa0.37□□□□□ -2.35
CD46-216ENST00000490278 IGHV3-30-5P0DP03 117 aa0.37□□□□□ -2.35
CD46-216ENST00000490278 NDUFA6P56556 154 aa0.37□□□□□ -2.35
CD46-216ENST00000490278 PRELID3AQ96N28 172 aa0.37□□□□□ -2.35
CD46-216ENST00000490278 FAM103A1Q9BTL3 118 aaKnown RBP0.37□□□□□ -2.35
CD46-216ENST00000490278 LAMTOR2Q9Y2Q5 125 aa0.37□□□□□ -2.35
CD46-216ENST00000490278 KMT2DO14686 5537 aa0.37□□□□□ -2.35
CD46-216ENST00000490278 MYH3P11055 1940 aa0.36□□□□□ -2.35
CD46-216ENST00000490278 PFDN1O60925 122 aa0.36□□□□□ -2.35
CD46-216ENST00000490278 SULT1C4O75897 302 aa0.36□□□□□ -2.35
CD46-216ENST00000490278 BCL2P10415 239 aa0.36□□□□□ -2.35
CD46-216ENST00000490278 TPT1P13693 172 aaKnown RBP0.36□□□□□ -2.35
CD46-216ENST00000490278 SDC2P34741 201 aa0.36□□□□□ -2.35
CD46-216ENST00000490278 GNG10P50151 68 aa0.36□□□□□ -2.35
CD46-216ENST00000490278 TMEM78Q5T7P6 136 aa0.36□□□□□ -2.35
CD46-216ENST00000490278 PPP1R2P3Q6NXS1 205 aa0.36□□□□□ -2.35
CD46-216ENST00000490278 CLEC2BQ92478 149 aa0.36□□□□□ -2.35
CD46-216ENST00000490278 AP1S3Q96PC3 154 aa0.36□□□□□ -2.35
CD46-216ENST00000490278 LPAR5Q9H1C0 372 aa0.36□□□□□ -2.35
CD46-216ENST00000490278 NAV3Q8IVL0 2385 aa0.36□□□□□ -2.35
CD46-216ENST00000490278 SPTBP11277 2137 aa0.35□□□□□ -2.35
CD46-216ENST00000490278 KRTAP2-3P0C7H8 128 aa0.35□□□□□ -2.35
CD46-216ENST00000490278 S100A11P31949 105 aa0.35□□□□□ -2.35
CD46-216ENST00000490278 CAV3P56539 151 aa0.35□□□□□ -2.35
CD46-216ENST00000490278 IZUMO2Q6UXV1 221 aa0.35□□□□□ -2.35
CD46-216ENST00000490278 STX12Q86Y82 276 aa0.35□□□□□ -2.35
CD46-216ENST00000490278 CIB3Q96Q77 187 aaPredicted RBP0.35□□□□□ -2.35
CD46-216ENST00000490278 CCDC32Q9BV29 185 aa0.35□□□□□ -2.35
CD46-216ENST00000490278 KRTAP2-4Q9BYR9 128 aa0.35□□□□□ -2.35
CD46-216ENST00000490278 KRTAP2-1Q9BYU5 128 aa0.35□□□□□ -2.35
CD46-216ENST00000490278 SAA1P0DJI8 122 aaPredicted RBP0.34□□□□□ -2.36
CD46-216ENST00000490278 MAXP61244 160 aa0.34□□□□□ -2.36
CD46-216ENST00000490278 PCBD2Q9H0N5 130 aa0.34□□□□□ -2.36
CD46-216ENST00000490278 ATPIF1Q9UII2 106 aa0.34□□□□□ -2.36
CD46-216ENST00000490278 USP24Q9UPU5 2620 aa0.33□□□□□ -2.36
CD46-216ENST00000490278 A0A1W2PRE2 83 aa0.33□□□□□ -2.36
CD46-216ENST00000490278 BBIP1A8MTZ0 92 aa0.33□□□□□ -2.36
CD46-216ENST00000490278 GYPBP06028 91 aa0.33□□□□□ -2.36
CD46-216ENST00000490278 RPS3P23396 243 aaKnown RBP eCLIP0.33□□□□□ -2.36
CD46-216ENST00000490278 XAF1Q6GPH4 301 aa0.33□□□□□ -2.36
CD46-216ENST00000490278 C10orf99Q6UWK7 81 aa0.33□□□□□ -2.36
CD46-216ENST00000490278 LINC00305Q7Z4B0 112 aa0.33□□□□□ -2.36
CD46-216ENST00000490278 TMEM229BQ8NBD8 167 aa0.33□□□□□ -2.36
CD46-216ENST00000490278 ZCCHC11Q5TAX3 1644 aaKnown RBP0.33□□□□□ -2.36
CD46-216ENST00000490278 DLC1Q96QB1 1528 aa0.33□□□□□ -2.36
CD46-216ENST00000490278 TRBV27A0A0K0K1C4 114 aa0.32□□□□□ -2.36
CD46-216ENST00000490278 ARL5CA6NH57 179 aa0.32□□□□□ -2.36
CD46-216ENST00000490278 SNRPD3P62318 126 aaKnown RBP0.32□□□□□ -2.36
CD46-216ENST00000490278 QRFPP83859 136 aa0.32□□□□□ -2.36
CD46-216ENST00000490278 TCTEX1D1Q8N7M0 179 aa0.32□□□□□ -2.36
CD46-216ENST00000490278 TSKUQ8WUA8 353 aa0.32□□□□□ -2.36
CD46-216ENST00000490278 NABP2Q9BQ15 211 aa0.32□□□□□ -2.36
CD46-216ENST00000490278 LXNQ9BS40 222 aa0.32□□□□□ -2.36
CD46-216ENST00000490278 TCOF1Q13428 1488 aaKnown RBP0.32□□□□□ -2.36
CD46-216ENST00000490278 ANKRD31Q8N7Z5 1873 aa0.32□□□□□ -2.36
CD46-216ENST00000490278 DSPPQ9NZW4 1301 aa0.32□□□□□ -2.36
CD46-216ENST00000490278 TRAV13-1A0A0B4J241 112 aa0.31□□□□□ -2.36
CD46-216ENST00000490278 LOC107984156A0A0G2JMH3 177 aa0.31□□□□□ -2.36
CD46-216ENST00000490278 LOC107986453A0A1B0GWG9 222 aa0.31□□□□□ -2.36
CD46-216ENST00000490278 A0A1W2PPB8 328 aa0.31□□□□□ -2.36
CD46-216ENST00000490278 A0A1W2PRS3 328 aa0.31□□□□□ -2.36
CD46-216ENST00000490278 KIR3DP1A8MWS1 328 aa0.31□□□□□ -2.36
CD46-216ENST00000490278 E7EQ34 232 aa0.31□□□□□ -2.36
CD46-216ENST00000490278 FAM107AO95990 144 aa0.31□□□□□ -2.36
CD46-216ENST00000490278 DNAJB13P59910 316 aa0.31□□□□□ -2.36
CD46-216ENST00000490278 CSAG1Q6PB30 78 aa0.31□□□□□ -2.36
CD46-216ENST00000490278 C3orf62Q6ZUJ4 267 aa0.31□□□□□ -2.36
CD46-216ENST00000490278 ARL17AQ8IVW1 177 aa0.31□□□□□ -2.36
CD46-216ENST00000490278 TEX29Q8N6K0 151 aa0.31□□□□□ -2.36
CD46-216ENST00000490278 FKBP11Q9NYL4 201 aa0.31□□□□□ -2.36
CD46-216ENST00000490278 MPC1Q9Y5U8 109 aa0.31□□□□□ -2.36
CD46-216ENST00000490278 NUP210Q8TEM1 1887 aaPredicted RBP0.31□□□□□ -2.36
CD46-216ENST00000490278 USP54Q70EL1 1684 aa0.3□□□□□ -2.36
CD46-216ENST00000490278 CTTNBP2Q8WZ74 1663 aa0.3□□□□□ -2.36
CD46-216ENST00000490278 TRBV7-6A0A0J9YX20 115 aa0.3□□□□□ -2.36
CD46-216ENST00000490278 PRORSD1PA6NEY8 169 aa0.3□□□□□ -2.36
CD46-216ENST00000490278 SRP9P49458 86 aaKnown RBP0.3□□□□□ -2.36
CD46-216ENST00000490278 CCSMST1Q4G0I0 132 aa0.3□□□□□ -2.36
CD46-216ENST00000490278 GLYATL3Q5SZD4 288 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms