RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 ARID2Q68CP9 1835 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 HEATR5AQ86XA9 2040 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 CRYM-AS1A6NIL9 109 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 LINC01548A6NM66 108 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 F6UB75 175 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 H3BP45 60 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 J3QLW9 94 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 BCE1O60756 84 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 TIMM17BO60830 172 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 HBDP02042 147 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 EGR2P11161 476 aaPredicted RBP3.89□□□□□ -1.79
COL3A1-205ENST00000470167 PSMB2P49721 201 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 FXYD6P3P58550 94 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 RUSC1-AS1Q66K80 236 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 LINC00173Q6ZV60 143 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 ZNF627Q7L945 461 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 CD177Q8N6Q3 437 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 C11orf52Q96A22 123 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 SPACA5Q96QH8 159 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 PLA2G12AQ9BZM1 189 aa3.89□□□□□ -1.79
COL3A1-205ENST00000470167 GCN1Q92616 2671 aaKnown RBP3.89□□□□□ -1.79
COL3A1-205ENST00000470167 GREB1LQ9C091 1923 aaPredicted RBP3.89□□□□□ -1.79
COL3A1-205ENST00000470167 PCSK5Q92824 1860 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 MUC3AQ02505 3323 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 TRBV25-1A0A075B6N4 114 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 LST1O00453 97 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 PRYO14603 147 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 MGST3O14880 152 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 CCKP06307 115 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 GNB1P62873 340 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 HBBP68871 147 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 SS18Q15532 418 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 ZNF329Q86UD4 541 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 NTN5Q8WTR8 489 aaPredicted RBP3.88□□□□□ -1.79
COL3A1-205ENST00000470167 TMEM190Q8WZ59 177 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 C18orf12Q96KH6 178 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 TMEM243Q9BU79 118 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 KIAA1671Q9BY89 1806 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 ZFHX4Q86UP3 3567 aa3.88□□□□□ -1.79
COL3A1-205ENST00000470167 TRBV20OR9-2A0A075B6H5 130 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 TRBV10-2A0A0K0K1G8 114 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 A0A1W2PQD3 144 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 C17orf51A8MQB3 221 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 A8MUN3 132 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 KLLNB2CW77 178 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 C11orf94C9JXX5 98 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 NXPH3O95157 252 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 DYNLT3P51808 116 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 SUMO2P61956 95 aaKnown RBP3.87□□□□□ -1.79
COL3A1-205ENST00000470167 RIGQ13278 110 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 FHL2Q14192 279 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 ABCA11PQ4W5N1 156 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 NDUFA11Q86Y39 141 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 MED12LQ86YW9 2145 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 ODF3L1Q8IXM7 274 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 GVQW1Q8N7I0 195 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.87□□□□□ -1.79
COL3A1-205ENST00000470167 TOMM6Q96B49 74 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 FXYD5Q96DB9 178 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 MKI67P46013 3256 aaKnown RBP3.87□□□□□ -1.79
COL3A1-205ENST00000470167 OBSL1O75147 1896 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 NHSQ6T4R5 1651 aa3.87□□□□□ -1.79
COL3A1-205ENST00000470167 RANBP2P49792 3224 aaKnown RBP3.86□□□□□ -1.79
COL3A1-205ENST00000470167 ANKRD17O75179 2603 aaKnown RBP3.86□□□□□ -1.79
COL3A1-205ENST00000470167 POLR2AP24928 1970 aaKnown RBP3.86□□□□□ -1.79
COL3A1-205ENST00000470167 IGLV1-36A0A0B4J1U3 117 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 H0Y9J4 135 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 H7BZZ5 65 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 TMEM256-PLSCR3K7ERE1 68 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 M0R381 172 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 NDUFC1O43677 76 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 WISP2O76076 250 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 FSTL3O95633 263 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 IFI6P09912 130 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 FRMD6-AS1P0C7T7 363 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 CD70P32970 193 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 FOLR3P41439 243 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 ZNF80P51504 273 aaPredicted RBP3.86□□□□□ -1.79
COL3A1-205ENST00000470167 LY6G5CQ5SRR4 150 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 GFRALQ6UXV0 394 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 Q75L30 129 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 VSIG2Q96IQ7 327 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 KRTAP9-8Q9BYQ0 159 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 DYNLRB1Q9NP97 96 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 ZNF71Q9NQZ8 489 aaPredicted RBP3.86□□□□□ -1.79
COL3A1-205ENST00000470167 TPRP12270 2363 aaKnown RBP3.86□□□□□ -1.79
COL3A1-205ENST00000470167 PTPN13Q12923 2485 aa3.86□□□□□ -1.79
COL3A1-205ENST00000470167 NCOR1O75376 2440 aa3.85□□□□□ -1.79
COL3A1-205ENST00000470167 TRBV7-1A0A0A6YYK4 115 aa3.85□□□□□ -1.79
COL3A1-205ENST00000470167 IGKV1D-43A0A0B4J1Z2 117 aa3.85□□□□□ -1.79
COL3A1-205ENST00000470167 CACNG7P62955 275 aa3.85□□□□□ -1.79
COL3A1-205ENST00000470167 LYPD5Q6UWN5 251 aa3.85□□□□□ -1.79
COL3A1-205ENST00000470167 CLEC19AQ6UXS0 136 aa3.85□□□□□ -1.79
COL3A1-205ENST00000470167 C16orf47Q6ZP98 133 aaPredicted RBP3.85□□□□□ -1.79
COL3A1-205ENST00000470167 FAM19A3Q7Z5A8 133 aa3.85□□□□□ -1.79
COL3A1-205ENST00000470167 RPRMLQ8N4K4 120 aa3.85□□□□□ -1.79
COL3A1-205ENST00000470167 LINC01465Q8N7H1 131 aa3.85□□□□□ -1.79
COL3A1-205ENST00000470167 TAF15Q92804 592 aaKnown RBP eCLIP3.85□□□□□ -1.79
COL3A1-205ENST00000470167 TIMM17AQ99595 171 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms