RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 TIMM17BO60830 172 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 NXPH4O95158 308 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 MBD6Q96DN6 1003 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 FANCD2OSQ96PS1 177 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 KIAA1549LQ6ZVL6 1849 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 CACNA1BQ00975 2339 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 NUP210Q8TEM1 1887 aaPredicted RBP1.76□□□□□ -2.13
USP53-202ENST00000450251 TRBV19A0A075B6N1 114 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 IGKV1-12A0A0C4DH73 117 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 LMO7DNF2Z398 122 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 HRKO00198 91 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 IGKV1D-12P01611 117 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 NEU4Q8WWR8 484 aaPredicted RBP1.76□□□□□ -2.13
USP53-202ENST00000450251 DSCR8Q96T75 97 aa1.76□□□□□ -2.13
USP53-202ENST00000450251 IGKV1-27A0A075B6S5 117 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 I3L3M4 83 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 COX7A2LO14548 114 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 SNRPD3P62318 126 aaKnown RBP1.75□□□□□ -2.13
USP53-202ENST00000450251 RPL39P5Q59GN2 51 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 FAM222AQ5U5X8 452 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 RSPO2Q6UXX9 243 aaPredicted RBP1.75□□□□□ -2.13
USP53-202ENST00000450251 Q6ZRM9 215 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 C5orf38Q86SI9 138 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 TP53TG1Q9Y2A0 90 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 DOCK6Q96HP0 2047 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 TMEM131Q92545 1883 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 TRAV7A0A075B6U4 112 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 A0A087WV48 116 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 TRGV5A0A0B4J1U4 118 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 IGKV1D-43A0A0B4J1Z2 117 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 TRAV17A0A0B4J275 112 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 IGHV3-20A0A0C4DH32 117 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 PMS2P5A8MQ11 134 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 IGKV1-39P01597 117 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 IGKV1D-39P04432 117 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 FUSP35637 526 aaKnown RBP eCLIP1.75□□□□□ -2.13
USP53-202ENST00000450251 BLCAPP62952 87 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 PMAIP1Q13794 54 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 HRCT1Q6UXD1 115 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 GPHA2Q96T91 129 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 PRSS22Q9GZN4 317 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 CDIP1Q9H305 208 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 PPDPFQ9H3Y8 114 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 DAZ1Q9NQZ3 744 aaKnown RBP1.75□□□□□ -2.13
USP53-202ENST00000450251 RLFQ13129 1914 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 ZNF292O60281 2723 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 NBPF19A0A087WUL8 3843 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 LOC107984640A0A0U1RRK4 108 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 J3QLI3 93 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 SPRY3O43610 288 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 PROP1O75360 226 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 IGHV3-9P01782 118 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 CXCL10P02778 98 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 UBE2D3P61077 147 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 UBE2D2P62837 147 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 C9orf85Q96MD7 179 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 NDUFA12Q9UI09 145 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 TRBV7-3A0A075B6L6 115 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 A0A1W2PR77 199 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 MIAQ16674 131 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 CXorf67Q86X51 503 aaPredicted RBP1.75□□□□□ -2.13
USP53-202ENST00000450251 RNF152Q8N8N0 203 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 ZC2HC1AQ96GY0 325 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 ZNF581Q9P0T4 197 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 IGKV3D-15A0A087WSY6 115 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 TRAV4A0A0B4J268 109 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 M0R1W7 72 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 NDUFB1O75438 58 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 CRYGDP07320 174 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 ELANEP08246 267 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 FOXE3Q13461 319 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 MORN5Q5VZ52 161 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 LINC00173Q6ZV60 143 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 MCRIP2Q9BUT9 160 aaKnown RBP1.75□□□□□ -2.13
USP53-202ENST00000450251 NDUFA4L2Q9NRX3 87 aa1.75□□□□□ -2.13
USP53-202ENST00000450251 BSNQ9UPA5 3926 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 TRBV10-3A0A0K0K1G6 114 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 PLAC8L1A1L4L8 177 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 OOSP1A8MZH6 123 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 CCL11P51671 97 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 CD164Q04900 197 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 FOXF2Q12947 444 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 KRTAP27-1Q3LI81 207 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 FAM120AOSQ5T036 256 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 HCP5Q6MZN7 132 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 FGFBP3Q8TAT2 258 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 ZNF503Q96F45 646 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 KMT2BQ9UMN6 2715 aaPredicted RBP1.74□□□□□ -2.13
USP53-202ENST00000450251 NCOR2Q9Y618 2525 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 IGHV1OR21-1A0A087WYE8 117 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 IGKV1-6A0A0C4DH72 117 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 TMEM256-PLSCR3K7ERE1 68 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 MUSTN1Q8IVN3 82 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 SBSPONQ8IVN8 264 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 C11orf44Q8N8P7 122 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 PRR25Q96S07 402 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 ZMAT4Q9H898 229 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 BRWD1Q9NSI6 2320 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 TRBV7-1A0A0A6YYK4 115 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 IGHV5-51A0A0C4DH38 117 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms