RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CFAP47Q6ZTR5 3102 aa9.87□□□□□ -0.83
UBE3B-204ENST00000449510 MUC22E2RYF6 1773 aaPredicted RBP9.86□□□□□ -0.83
UBE3B-204ENST00000449510 CCDC168Q8NDH2 2452 aa9.86□□□□□ -0.83
UBE3B-204ENST00000449510 NEGR1Q7Z3B1 354 aa9.86□□□□□ -0.83
UBE3B-204ENST00000449510 RAX2Q96IS3 184 aa9.86□□□□□ -0.83
UBE3B-204ENST00000449510 VGLL1Q99990 258 aa9.86□□□□□ -0.83
UBE3B-204ENST00000449510 TMEM238LA0A1B0GVL6 79 aa9.86□□□□□ -0.83
UBE3B-204ENST00000449510 A6NJY4 79 aa9.86□□□□□ -0.83
UBE3B-204ENST00000449510 SPINK8P0C7L1 97 aa9.86□□□□□ -0.83
UBE3B-204ENST00000449510 HERVK_113P61574 105 aa9.86□□□□□ -0.83
UBE3B-204ENST00000449510 WIPF2Q8TF74 440 aaPredicted RBP9.86□□□□□ -0.83
UBE3B-204ENST00000449510 DPF1Q92782 380 aa9.86□□□□□ -0.83
UBE3B-204ENST00000449510 OTOGLQ3ZCN5 2332 aa9.86□□□□□ -0.83
UBE3B-204ENST00000449510 MGAQ8IWI9 3026 aa9.86□□□□□ -0.83
UBE3B-204ENST00000449510 TRBV19A0A075B6N1 114 aa9.86□□□□□ -0.83
UBE3B-204ENST00000449510 IGHV3-11P01762 117 aa9.86□□□□□ -0.83
UBE3B-204ENST00000449510 RAB9AP51151 201 aa9.86□□□□□ -0.83
UBE3B-204ENST00000449510 HAX1O00165 279 aa9.85□□□□□ -0.83
UBE3B-204ENST00000449510 DPM3Q9P2X0 92 aa9.85□□□□□ -0.83
UBE3B-204ENST00000449510 BOD1L1Q8NFC6 3051 aa9.85□□□□□ -0.83
UBE3B-204ENST00000449510 PTPRSQ13332 1948 aa9.85□□□□□ -0.83
UBE3B-204ENST00000449510 A0A0U1RRA0 63 aa9.85□□□□□ -0.83
UBE3B-204ENST00000449510 FNDC10F2Z333 226 aa9.85□□□□□ -0.83
UBE3B-204ENST00000449510 IGHV4-39P01824 125 aa9.85□□□□□ -0.83
UBE3B-204ENST00000449510 RPS20P60866 119 aaKnown RBP9.85□□□□□ -0.83
UBE3B-204ENST00000449510 NPC2P61916 151 aa9.85□□□□□ -0.83
UBE3B-204ENST00000449510 TTC32Q5I0X7 151 aa9.85□□□□□ -0.83
UBE3B-204ENST00000449510 LINC01545Q5VT33 79 aa9.85□□□□□ -0.83
UBE3B-204ENST00000449510 C14orf178Q8N769 122 aaPredicted RBP9.85□□□□□ -0.83
UBE3B-204ENST00000449510 KHDC1LQ5JSQ8 128 aa9.85□□□□□ -0.83
UBE3B-204ENST00000449510 NPFFR1Q9GZQ6 430 aa9.85□□□□□ -0.83
UBE3B-204ENST00000449510 CPAMD8Q8IZJ3 1885 aa9.84□□□□□ -0.83
UBE3B-204ENST00000449510 SYT8Q8NBV8 401 aa9.84□□□□□ -0.83
UBE3B-204ENST00000449510 RNASE6Q93091 150 aaKnown RBP9.84□□□□□ -0.83
UBE3B-204ENST00000449510 NXT2Q9NPJ8 142 aaKnown RBP9.84□□□□□ -0.83
UBE3B-204ENST00000449510 TMEM178BH3BS89 294 aa9.84□□□□□ -0.83
UBE3B-204ENST00000449510 EIF4EBP1Q13541 118 aaPredicted RBP9.84□□□□□ -0.83
UBE3B-204ENST00000449510 A0A1B0GW15 77 aa9.84□□□□□ -0.83
UBE3B-204ENST00000449510 LINC01549A6NIU2 74 aa9.84□□□□□ -0.83
UBE3B-204ENST00000449510 EGR2P11161 476 aaPredicted RBP9.84□□□□□ -0.83
UBE3B-204ENST00000449510 CD59P13987 128 aa9.84□□□□□ -0.83
UBE3B-204ENST00000449510 ADIPOQQ15848 244 aa9.84□□□□□ -0.83
UBE3B-204ENST00000449510 ANAPC13Q9BS18 74 aa9.84□□□□□ -0.83
UBE3B-204ENST00000449510 USP9XQ93008 2570 aaPredicted RBP9.83□□□□□ -0.84
UBE3B-204ENST00000449510 NBR2O15453 112 aa9.83□□□□□ -0.84
UBE3B-204ENST00000449510 TRBV25-1A0A075B6N4 114 aa9.83□□□□□ -0.84
UBE3B-204ENST00000449510 IGKV3D-20A0A0C4DH25 116 aa9.83□□□□□ -0.84
UBE3B-204ENST00000449510 A0A1W2PNU3 283 aaPredicted RBP9.83□□□□□ -0.84
UBE3B-204ENST00000449510 LY6EQ16553 131 aa9.83□□□□□ -0.84
UBE3B-204ENST00000449510 LYRM7Q5U5X0 104 aa9.83□□□□□ -0.84
UBE3B-204ENST00000449510 RUSC1-AS1Q66K80 236 aa9.83□□□□□ -0.84
UBE3B-204ENST00000449510 METTL26Q96S19 204 aa9.83□□□□□ -0.84
UBE3B-204ENST00000449510 ZNF492Q9P255 531 aa9.83□□□□□ -0.84
UBE3B-204ENST00000449510 CHTOPQ9Y3Y2 248 aaKnown RBP9.83□□□□□ -0.84
UBE3B-204ENST00000449510 RNASE4P34096 147 aaKnown RBP9.83□□□□□ -0.84
UBE3B-204ENST00000449510 FOXE3Q13461 319 aa9.83□□□□□ -0.84
UBE3B-204ENST00000449510 TECTAO75443 2155 aa9.82□□□□□ -0.84
UBE3B-204ENST00000449510 TRAV2A0A0B4J234 112 aa9.82□□□□□ -0.84
UBE3B-204ENST00000449510 URB1-AS1Q96HZ7 61 aa9.82□□□□□ -0.84
UBE3B-204ENST00000449510 GFRA4Q9GZZ7 299 aa9.82□□□□□ -0.84
UBE3B-204ENST00000449510 RAB1BQ9H0U4 201 aa9.82□□□□□ -0.84
UBE3B-204ENST00000449510 GEMIN7Q9H840 131 aaKnown RBP9.82□□□□□ -0.84
UBE3B-204ENST00000449510 ANKRD11Q6UB99 2663 aaPredicted RBP9.82□□□□□ -0.84
UBE3B-204ENST00000449510 PPBPP02775 128 aa9.82□□□□□ -0.84
UBE3B-204ENST00000449510 SHANK2-AS3Q9BTD1 123 aa9.82□□□□□ -0.84
UBE3B-204ENST00000449510 ABCA2Q9BZC7 2435 aa9.82□□□□□ -0.84
UBE3B-204ENST00000449510 IGKV1D-37A0A075B6S9 117 aa9.81□□□□□ -0.84
UBE3B-204ENST00000449510 LGALS3P17931 250 aaKnown RBP9.81□□□□□ -0.84
UBE3B-204ENST00000449510 WT1P19544 449 aaPredicted RBP9.81□□□□□ -0.84
UBE3B-204ENST00000449510 LGALS9BQ3B8N2 356 aa9.81□□□□□ -0.84
UBE3B-204ENST00000449510 LGALS9CQ6DKI2 356 aa9.81□□□□□ -0.84
UBE3B-204ENST00000449510 MUC6Q6W4X9 2439 aa9.81□□□□□ -0.84
UBE3B-204ENST00000449510 PF4V1P10720 104 aa9.81□□□□□ -0.84
UBE3B-204ENST00000449510 GP9P14770 177 aa9.81□□□□□ -0.84
UBE3B-204ENST00000449510 SRSF1Q07955 248 aaKnown RBP eCLIP9.81□□□□□ -0.84
UBE3B-204ENST00000449510 LAGE3Q14657 143 aa9.81□□□□□ -0.84
UBE3B-204ENST00000449510 CT83Q5H943 113 aa9.81□□□□□ -0.84
UBE3B-204ENST00000449510 ZNF833PQ6ZTB9 187 aa9.81□□□□□ -0.84
UBE3B-204ENST00000449510 IL17RELQ6ZVW7 336 aa9.81□□□□□ -0.84
UBE3B-204ENST00000449510 DSCAMO60469 2012 aa9.81□□□□□ -0.84
UBE3B-204ENST00000449510 RPL13AP40429 203 aaKnown RBP9.81□□□□□ -0.84
UBE3B-204ENST00000449510 C15orf32Q32M92 178 aa9.81□□□□□ -0.84
UBE3B-204ENST00000449510 OR10J6PQ8NGY7 276 aa9.81□□□□□ -0.84
UBE3B-204ENST00000449510 PTH2Q96A98 100 aa9.81□□□□□ -0.84
UBE3B-204ENST00000449510 AGRNO00468 2067 aa9.81□□□□□ -0.84
UBE3B-204ENST00000449510 IGLV3-9A0A075B6K5 115 aa9.8□□□□□ -0.84
UBE3B-204ENST00000449510 A0A1B0GXF2 115 aa9.8□□□□□ -0.84
UBE3B-204ENST00000449510 IGKV1-17P01599 117 aa9.8□□□□□ -0.84
UBE3B-204ENST00000449510 HLA-DRB4P13762 266 aa9.8□□□□□ -0.84
UBE3B-204ENST00000449510 C22orf34Q6ZV56 151 aa9.8□□□□□ -0.84
UBE3B-204ENST00000449510 PRR25Q96S07 402 aa9.8□□□□□ -0.84
UBE3B-204ENST00000449510 HLA-DRB4X5D2U9 266 aa9.8□□□□□ -0.84
UBE3B-204ENST00000449510 G3V4G9 280 aa9.8□□□□□ -0.84
UBE3B-204ENST00000449510 POU2AF1Q16633 256 aa9.8□□□□□ -0.84
UBE3B-204ENST00000449510 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.8□□□□□ -0.84
UBE3B-204ENST00000449510 FOXC1Q12948 553 aa9.8□□□□□ -0.84
UBE3B-204ENST00000449510 PVRIGQ6DKI7 326 aa9.8□□□□□ -0.84
UBE3B-204ENST00000449510 DTX2Q86UW9 622 aa9.8□□□□□ -0.84
UBE3B-204ENST00000449510 LTBP2Q14767 1821 aa9.8□□□□□ -0.84
UBE3B-204ENST00000449510 TRAV12-3A0A0B4J271 114 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms