RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SYNMO15061 1565 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 PHRF1Q9P1Y6 1649 aaKnown RBP0.28□□□□□ -2.36
CDC40-204ENST00000431461 UNC13CQ8NB66 2214 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.28□□□□□ -2.36
CDC40-204ENST00000431461 LOC107986453A0A1B0GWG9 222 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 ODAMA1E959 279 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 MAP1LC3B2A6NCE7 125 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 MFSD11O43934 449 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 CSN2P05814 226 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 CD14P08571 375 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 SDC2P34741 201 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 ETV6P41212 452 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 SPINT3P49223 89 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 QRFPP83859 136 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 MSMO1Q15800 293 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 ASB16-AS1Q495Z4 193 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 XAF1Q6GPH4 301 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 TCTEX1D1Q8N7M0 179 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 TMEM229BQ8NBD8 167 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 OR5H6Q8NGV6 325 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 PRELID3AQ96N28 172 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 MRPL35Q9NZE8 188 aaKnown RBP0.28□□□□□ -2.36
CDC40-204ENST00000431461 ASB4Q9Y574 426 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 MPC1Q9Y5U8 109 aa0.28□□□□□ -2.36
CDC40-204ENST00000431461 BCL9O00512 1426 aa0.28□□□□□ -2.37
CDC40-204ENST00000431461 TRBV27A0A0K0K1C4 114 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 TRDV1A0A1B0GX56 115 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 MCRIP1C9JLW8 97 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 K7ERJ3 54 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 FABP2P12104 132 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 RPS3P23396 243 aaKnown RBP eCLIP0.27□□□□□ -2.37
CDC40-204ENST00000431461 MAXP61244 160 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 RPL37AP61513 92 aaKnown RBP0.27□□□□□ -2.37
CDC40-204ENST00000431461 LTC4SQ16873 150 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 KRTAP21-1Q3LI58 79 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 C6orf52Q5T4I8 152 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 TOMM20LQ6UXN7 152 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 SMIM20Q8N5G0 67 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 TSKUQ8WUA8 353 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 PPP1R1CQ8WVI7 109 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 CCL19Q99731 98 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 SMR3AQ99954 134 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 LRTM1Q9HBL6 345 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 SPANXCQ9NY87 97 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 SS18L2Q9UHA2 77 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 MUC5ACP98088 5654 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 FRMPD1Q5SYB0 1578 aa0.27□□□□□ -2.37
CDC40-204ENST00000431461 PTPRDP23468 1912 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 ZGRF1Q86YA3 2104 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 MUC4Q99102 2169 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 TRBV7-6A0A0J9YX20 115 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 A0A1W2PPB8 328 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 A0A1W2PRS3 328 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 HIGD1CA8MV81 97 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 KIR3DP1A8MWS1 328 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 TMEM238C9JI98 176 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 PRH1P02810 166 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 EVI2AP22794 236 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 SDC4P31431 198 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 GLRXP35754 106 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 NEDD8Q15843 81 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 TMEM78Q5T7P6 136 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 Q5XG85 94 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 LINC00305Q7Z4B0 112 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 DEFB132Q7Z7B7 95 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 OR9Q1Q8NGQ5 310 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 PLAC4Q8WY50 150 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 VPS25Q9BRG1 176 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 OTORQ9NRC9 128 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 SPANXA1Q9NS26 97 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 GID8Q9NWU2 228 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 MYH2Q9UKX2 1941 aa0.26□□□□□ -2.37
CDC40-204ENST00000431461 TET1Q8NFU7 2136 aa0.25□□□□□ -2.37
CDC40-204ENST00000431461 FANCMQ8IYD8 2048 aa0.25□□□□□ -2.37
CDC40-204ENST00000431461 TRAV13-1A0A0B4J241 112 aa0.25□□□□□ -2.37
CDC40-204ENST00000431461 C3orf85A0A1B0GTC6 90 aa0.25□□□□□ -2.37
CDC40-204ENST00000431461 PNMA8CA0A1B0GUJ8 204 aa0.25□□□□□ -2.37
CDC40-204ENST00000431461 NUPR2A6NF83 97 aa0.25□□□□□ -2.37
CDC40-204ENST00000431461 IGF2P01344 180 aa0.25□□□□□ -2.37
CDC40-204ENST00000431461 SNRPD3P62318 126 aaKnown RBP0.25□□□□□ -2.37
CDC40-204ENST00000431461 TFAMQ00059 246 aaKnown RBP0.25□□□□□ -2.37
CDC40-204ENST00000431461 Q86TA4 180 aa0.25□□□□□ -2.37
CDC40-204ENST00000431461 OR8J3Q8NGG0 315 aa0.25□□□□□ -2.37
CDC40-204ENST00000431461 CDC26Q8NHZ8 85 aa0.25□□□□□ -2.37
CDC40-204ENST00000431461 SMIM7Q9BQ49 75 aa0.25□□□□□ -2.37
CDC40-204ENST00000431461 PCBD2Q9H0N5 130 aa0.25□□□□□ -2.37
CDC40-204ENST00000431461 TECPR2O15040 1411 aa0.24□□□□□ -2.37
CDC40-204ENST00000431461 A0A1B0GV72 72 aa0.24□□□□□ -2.37
CDC40-204ENST00000431461 TMEM189A5PLL7 270 aa0.24□□□□□ -2.37
CDC40-204ENST00000431461 H3BMG7 143 aa0.24□□□□□ -2.37
CDC40-204ENST00000431461 IFNA21P01568 189 aa0.24□□□□□ -2.37
CDC40-204ENST00000431461 S100A11P31949 105 aa0.24□□□□□ -2.37
CDC40-204ENST00000431461 CRYBA4P53673 196 aa0.24□□□□□ -2.37
CDC40-204ENST00000431461 SPINK6Q6UWN8 80 aa0.24□□□□□ -2.37
CDC40-204ENST00000431461 STX12Q86Y82 276 aa0.24□□□□□ -2.37
CDC40-204ENST00000431461 MORN4Q8NDC4 146 aa0.24□□□□□ -2.37
CDC40-204ENST00000431461 SKA2Q8WVK7 121 aaPredicted RBP0.24□□□□□ -2.37
CDC40-204ENST00000431461 CLEC2BQ92478 149 aa0.24□□□□□ -2.37
CDC40-204ENST00000431461 DMAC1Q96GE9 116 aa0.24□□□□□ -2.37
CDC40-204ENST00000431461 N4BP2Q86UW6 1770 aaPredicted RBP0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms