RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 TRAV30A0A087WSZ9 112 aa9.34□□□□□ -0.91
RBM39-206ENST00000403542 CST9LQ9H4G1 147 aa9.34□□□□□ -0.91
RBM39-206ENST00000403542 IGF2-ASQ6U949 168 aa9.34□□□□□ -0.91
RBM39-206ENST00000403542 CFHR4Q92496 578 aa9.34□□□□□ -0.91
RBM39-206ENST00000403542 PRR25Q96S07 402 aa9.34□□□□□ -0.91
RBM39-206ENST00000403542 H3BUT2 72 aa9.34□□□□□ -0.92
RBM39-206ENST00000403542 TCF15Q12870 199 aa9.34□□□□□ -0.92
RBM39-206ENST00000403542 TMEM97Q5BJF2 176 aa9.34□□□□□ -0.92
RBM39-206ENST00000403542 FER1L6-AS1Q8NA97 138 aa9.34□□□□□ -0.92
RBM39-206ENST00000403542 WI2-2373I1.2A0A1W2PRP0 233 aa9.33□□□□□ -0.92
RBM39-206ENST00000403542 GAGE12BA1L429 117 aa9.33□□□□□ -0.92
RBM39-206ENST00000403542 SMAD5-AS1Q9Y6J3 95 aa9.33□□□□□ -0.92
RBM39-206ENST00000403542 SAP30O75446 220 aa9.33□□□□□ -0.92
RBM39-206ENST00000403542 LINC00527Q9UJ94 153 aa9.33□□□□□ -0.92
RBM39-206ENST00000403542 UTP20O75691 2785 aaKnown RBP9.33□□□□□ -0.92
RBM39-206ENST00000403542 IGLV11-55A0A075B6I3 123 aa9.32□□□□□ -0.92
RBM39-206ENST00000403542 TRAV26-2A0A0B4J265 109 aa9.32□□□□□ -0.92
RBM39-206ENST00000403542 IFI27L1Q96BM0 104 aa9.32□□□□□ -0.92
RBM39-206ENST00000403542 MS4A6AQ9H2W1 248 aa9.32□□□□□ -0.92
RBM39-206ENST00000403542 CTSGP08311 255 aa9.32□□□□□ -0.92
RBM39-206ENST00000403542 DEFB104AQ8WTQ1 72 aa9.32□□□□□ -0.92
RBM39-206ENST00000403542 CSPG4Q6UVK1 2322 aa9.31□□□□□ -0.92
RBM39-206ENST00000403542 HBDP02042 147 aa9.31□□□□□ -0.92
RBM39-206ENST00000403542 OCIAD2Q56VL3 154 aa9.31□□□□□ -0.92
RBM39-206ENST00000403542 IL17RELQ6ZVW7 336 aa9.31□□□□□ -0.92
RBM39-206ENST00000403542 VMO1Q7Z5L0 202 aa9.31□□□□□ -0.92
RBM39-206ENST00000403542 AP1S3Q96PC3 154 aa9.31□□□□□ -0.92
RBM39-206ENST00000403542 JMJD8Q96S16 334 aa9.31□□□□□ -0.92
RBM39-206ENST00000403542 GAGE10A6NGK3 116 aa9.31□□□□□ -0.92
RBM39-206ENST00000403542 LINC01548A6NM66 108 aa9.31□□□□□ -0.92
RBM39-206ENST00000403542 CD5LO43866 347 aa9.31□□□□□ -0.92
RBM39-206ENST00000403542 IGHG4P01861 327 aa9.31□□□□□ -0.92
RBM39-206ENST00000403542 PRSS1P07477 247 aa9.31□□□□□ -0.92
RBM39-206ENST00000403542 FGF6P10767 208 aa9.31□□□□□ -0.92
RBM39-206ENST00000403542 G3V318 75 aa9.3□□□□□ -0.92
RBM39-206ENST00000403542 CLEC3BP05452 202 aa9.3□□□□□ -0.92
RBM39-206ENST00000403542 LEPP41159 167 aa9.3□□□□□ -0.92
RBM39-206ENST00000403542 C15orf32Q32M92 178 aa9.3□□□□□ -0.92
RBM39-206ENST00000403542 LYPD1Q8N2G4 141 aa9.3□□□□□ -0.92
RBM39-206ENST00000403542 RAB1BQ9H0U4 201 aa9.3□□□□□ -0.92
RBM39-206ENST00000403542 IGHV3OR16-10A0A075B7F0 116 aa9.3□□□□□ -0.92
RBM39-206ENST00000403542 RPL7P18124 248 aaKnown RBP9.3□□□□□ -0.92
RBM39-206ENST00000403542 ZFP36P26651 326 aaKnown RBP9.3□□□□□ -0.92
RBM39-206ENST00000403542 CEACAM3P40198 252 aa9.3□□□□□ -0.92
RBM39-206ENST00000403542 ZNF562Q6V9R5 426 aa9.3□□□□□ -0.92
RBM39-206ENST00000403542 UFC1Q9Y3C8 167 aa9.3□□□□□ -0.92
RBM39-206ENST00000403542 IGKV2D-26A0A0A0MRZ7 120 aa9.3□□□□□ -0.92
RBM39-206ENST00000403542 KIR3DS1Q14943 382 aa9.3□□□□□ -0.92
RBM39-206ENST00000403542 TIMD4Q96H15 378 aa9.3□□□□□ -0.92
RBM39-206ENST00000403542 PEF1Q9UBV8 284 aaKnown RBP9.3□□□□□ -0.92
RBM39-206ENST00000403542 ITPR1Q14643 2758 aa9.29□□□□□ -0.92
RBM39-206ENST00000403542 A1L4Q6 167 aa9.29□□□□□ -0.92
RBM39-206ENST00000403542 TRGV3P03979 118 aa9.29□□□□□ -0.92
RBM39-206ENST00000403542 RIPPLY3P57055 190 aa9.29□□□□□ -0.92
RBM39-206ENST00000403542 DEFB1P60022 68 aa9.29□□□□□ -0.92
RBM39-206ENST00000403542 Q6AWC8 147 aa9.29□□□□□ -0.92
RBM39-206ENST00000403542 CLEC19AQ6UXS0 136 aa9.29□□□□□ -0.92
RBM39-206ENST00000403542 ZNF493Q6ZR52 646 aa9.29□□□□□ -0.92
RBM39-206ENST00000403542 ZNF575Q86XF7 245 aa9.29□□□□□ -0.92
RBM39-206ENST00000403542 DOPEY2Q9Y3R5 2298 aa9.29□□□□□ -0.92
RBM39-206ENST00000403542 K7ERJ3 54 aa9.29□□□□□ -0.92
RBM39-206ENST00000403542 CDKN1BP46527 198 aa9.29□□□□□ -0.92
RBM39-206ENST00000403542 PAX2Q02962 417 aa9.29□□□□□ -0.92
RBM39-206ENST00000403542 VKORC1Q9BQB6 163 aa9.29□□□□□ -0.92
RBM39-206ENST00000403542 IGKV3-7A0A075B6H7 116 aa9.28□□□□□ -0.92
RBM39-206ENST00000403542 FBLL1A6NHQ2 334 aaKnown RBP9.28□□□□□ -0.92
RBM39-206ENST00000403542 NDUFA3O95167 84 aa9.28□□□□□ -0.92
RBM39-206ENST00000403542 GCSHP23434 173 aa9.28□□□□□ -0.92
RBM39-206ENST00000403542 GTSCR1Q86UQ5 136 aa9.28□□□□□ -0.92
RBM39-206ENST00000403542 OR11H6Q8NGC7 330 aa9.28□□□□□ -0.92
RBM39-206ENST00000403542 IGHV7-81A0A0B4J1V7 117 aa9.28□□□□□ -0.92
RBM39-206ENST00000403542 TMEM238LA0A1B0GVL6 79 aa9.28□□□□□ -0.92
RBM39-206ENST00000403542 SMAD7O15105 426 aaKnown RBP9.28□□□□□ -0.92
RBM39-206ENST00000403542 PDE6HQ13956 83 aa9.28□□□□□ -0.92
RBM39-206ENST00000403542 SAPCD1Q5SSQ6 148 aa9.28□□□□□ -0.92
RBM39-206ENST00000403542 NPBQ8NG41 125 aa9.28□□□□□ -0.92
RBM39-206ENST00000403542 RNF5Q99942 180 aa9.28□□□□□ -0.92
RBM39-206ENST00000403542 KLK15Q9H2R5 256 aa9.28□□□□□ -0.92
RBM39-206ENST00000403542 FLNCQ14315 2725 aa9.28□□□□□ -0.92
RBM39-206ENST00000403542 TRBV6-1A0A0K0K1D8 114 aa9.27□□□□□ -0.92
RBM39-206ENST00000403542 A0A1B0GW15 77 aa9.27□□□□□ -0.92
RBM39-206ENST00000403542 LY6G5BQ8NDX9 201 aa9.27□□□□□ -0.92
RBM39-206ENST00000403542 SORL1Q92673 2214 aa9.27□□□□□ -0.92
RBM39-206ENST00000403542 C11orf21Q9P2W6 132 aa9.27□□□□□ -0.92
RBM39-206ENST00000403542 USP9YO00507 2555 aaPredicted RBP9.27□□□□□ -0.93
RBM39-206ENST00000403542 PRTN3P24158 256 aa9.27□□□□□ -0.93
RBM39-206ENST00000403542 TMEM219Q86XT9 240 aa9.27□□□□□ -0.93
RBM39-206ENST00000403542 RNF185Q96GF1 192 aa9.27□□□□□ -0.93
RBM39-206ENST00000403542 FOXC2Q99958 501 aa9.27□□□□□ -0.93
RBM39-206ENST00000403542 MEGF9Q9H1U4 602 aa9.27□□□□□ -0.93
RBM39-206ENST00000403542 TNFRSF6BO95407 300 aa9.26□□□□□ -0.93
RBM39-206ENST00000403542 MAP1LC3AQ9H492 121 aa9.26□□□□□ -0.93
RBM39-206ENST00000403542 TMEM160Q9NX00 188 aa9.26□□□□□ -0.93
RBM39-206ENST00000403542 ZANQ9Y493 2812 aa9.26□□□□□ -0.93
RBM39-206ENST00000403542 POLQO75417 2590 aa9.26□□□□□ -0.93
RBM39-206ENST00000403542 A0A0G2JLM5 398 aa9.26□□□□□ -0.93
RBM39-206ENST00000403542 ATP6V0E1O15342 81 aa9.26□□□□□ -0.93
RBM39-206ENST00000403542 BMI1P35226 326 aa9.26□□□□□ -0.93
RBM39-206ENST00000403542 LGALS9BQ3B8N2 356 aa9.26□□□□□ -0.93
RBM39-206ENST00000403542 LGALS9CQ6DKI2 356 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms