RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 LAMTOR3Q9UHA4 124 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 PDZD2O15018 2839 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 TRAV13-1A0A0B4J241 112 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 TRACP01848 142 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 ZNF688P0C7X2 276 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 CRYGAP11844 174 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 C19orf54Q5BKX5 351 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 ZNF497Q6ZNH5 498 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 C9orf139Q6ZV77 190 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 ZNF645Q8N7E2 425 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 OR9G1Q8NH87 305 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 TXNDC17Q9BRA2 123 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 FGF23Q9GZV9 251 aaPredicted RBP5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 KIAA2026Q5HYC2 2103 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 ESPL1Q14674 2120 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 DOCK7Q96N67 2140 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 A0A0A0MQY5 61 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 SERF1AO75920 110 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 Q56UQ5 140 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 SELENOKQ9Y6D0 94 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 LRBAP50851 2863 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 USF3Q68DE3 2245 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 FCN1O00602 326 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 P0DMU3 169 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 FAM231AP0DMU4 169 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 FAM231CP0DMU5 169 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 CBLN1P23435 193 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 ZNF816Q0VGE8 651 aaPredicted RBP5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 DAZ2Q13117 558 aaKnown RBP5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 HES3Q5TGS1 186 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 Q6P435 159 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 DAZ4Q86SG3 579 aaKnown RBP5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 UBALD1Q8TB05 177 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 DAZ1Q9NQZ3 744 aaKnown RBP5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 DAZ3Q9NR90 486 aaKnown RBP5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 DEPPQ9NTK1 212 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 AP5S1Q9NUS5 200 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 PXMP4Q9Y6I8 212 aa5.23□□□□□ -1.57
TM9SF4-202ENST00000398022 DOCK11Q5JSL3 2073 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 SAA2-SAA4A0A096LPE2 208 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 KNCNA6PVL3 124 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 SMKR1H3BMG3 65 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 NTN3O00634 580 aaPredicted RBP5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 C3orf79P0CE67 100 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 MMD2Q8IY49 270 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 Q8N1Y9 231 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 WDYHV1Q96HA8 205 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 NPCDR1Q9BY65 106 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 X6R8D5 127 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 TEX50A0A1B0GTY4 177 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 SS18L1O75177 396 aaPredicted RBP5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 SPINK14Q6IE38 97 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 BPIFA4PQ86YQ2 179 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 NUP35Q8NFH5 326 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 NEURL1O76050 574 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 APOHP02749 345 aaPredicted RBP5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 CD55P08174 381 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 OTORQ9NRC9 128 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 U3KQE9 123 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 DCHS2Q6V1P9 2916 aa5.22□□□□□ -1.57
TM9SF4-202ENST00000398022 CCL21O00585 134 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 ZNF883P0CG24 379 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 Q6ZRU5 148 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 IGF2BP2-AS1Q96M15 143 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 KLK5Q9Y337 293 aaPredicted RBP5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 A0A1W2PNU3 283 aaPredicted RBP5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 PINLYPA6NC86 204 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 LYRM9A8MSI8 78 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 OVOL3O00110 214 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 ZNHIT1O43257 154 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 IGKV1D-33P01593 117 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 IGKV1-33P01594 117 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 MGST1P10620 155 aaKnown RBP5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 ERVK-16P61578 105 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 Q0VFX4 171 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 TIMM8BQ9Y5J9 83 aaPredicted RBP5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 SPTBN1Q01082 2364 aaKnown RBP5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 TRAV4A0A0B4J268 109 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 IGHV3-7P01780 117 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 TMEM136Q6ZRR5 245 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 MDP1Q86V88 176 aa5.21□□□□□ -1.58
TM9SF4-202ENST00000398022 NAV2Q8IVL1 2488 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 RBAKDNA6NC62 111 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 GHRHP01286 108 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 IGLV2-14P01704 120 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 PYYP10082 97 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 SAA4P35542 130 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 RTL8BQ17RB0 113 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 LINC00311Q8N616 119 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 PCSK5Q92824 1860 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 RBP4P02753 201 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 SMIM13P0DJ93 91 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 IL3RAP26951 378 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 TFF3Q07654 80 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 WFDC11Q8NEX6 87 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 TTTY12Q9BZ98 90 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 AGPAT4-IT1Q9H0P7 198 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 AMMECR1Q9Y4X0 333 aaPredicted RBP5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 MED12LQ86YW9 2145 aa5.2□□□□□ -1.58
TM9SF4-202ENST00000398022 TEX15Q9BXT5 2789 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms