RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 NEGR1Q7Z3B1 354 aa10.38□□□□□ -0.75
TRIM40-207ENST00000396581 CFHR4Q92496 578 aa10.38□□□□□ -0.75
TRIM40-207ENST00000396581 FANCD2OSQ96PS1 177 aa10.38□□□□□ -0.75
TRIM40-207ENST00000396581 NPIPB5A8MRT5 1133 aa10.38□□□□□ -0.75
TRIM40-207ENST00000396581 H3BUT2 72 aa10.38□□□□□ -0.75
TRIM40-207ENST00000396581 TIMM23O14925 209 aa10.38□□□□□ -0.75
TRIM40-207ENST00000396581 COX7A1P24310 79 aa10.38□□□□□ -0.75
TRIM40-207ENST00000396581 RNF185Q96GF1 192 aa10.38□□□□□ -0.75
TRIM40-207ENST00000396581 AP1S3Q96PC3 154 aa10.38□□□□□ -0.75
TRIM40-207ENST00000396581 G3V4G9 280 aa10.37□□□□□ -0.75
TRIM40-207ENST00000396581 GNG7O60262 68 aa10.37□□□□□ -0.75
TRIM40-207ENST00000396581 SAP30O75446 220 aa10.37□□□□□ -0.75
TRIM40-207ENST00000396581 CKS2P33552 79 aa10.37□□□□□ -0.75
TRIM40-207ENST00000396581 BMI1P35226 326 aa10.37□□□□□ -0.75
TRIM40-207ENST00000396581 MFAP4P55083 255 aa10.37□□□□□ -0.75
TRIM40-207ENST00000396581 LY6G5BQ8NDX9 201 aa10.37□□□□□ -0.75
TRIM40-207ENST00000396581 OR5A1Q8NGJ0 315 aa10.37□□□□□ -0.75
TRIM40-207ENST00000396581 OR2K2Q8NGT1 345 aa10.37□□□□□ -0.75
TRIM40-207ENST00000396581 MEGF9Q9H1U4 602 aa10.37□□□□□ -0.75
TRIM40-207ENST00000396581 HIGD1BQ9P298 99 aa10.37□□□□□ -0.75
TRIM40-207ENST00000396581 TMSB15BA0A087X1C1 80 aa10.37□□□□□ -0.75
TRIM40-207ENST00000396581 RPL7P18124 248 aaKnown RBP10.37□□□□□ -0.75
TRIM40-207ENST00000396581 LINC01559Q495D7 138 aa10.37□□□□□ -0.75
TRIM40-207ENST00000396581 PCP2Q8IVA1 136 aa10.37□□□□□ -0.75
TRIM40-207ENST00000396581 IGFBPL1Q8WX77 278 aa10.37□□□□□ -0.75
TRIM40-207ENST00000396581 IGKV2-40A0A087WW87 121 aaPredicted RBP10.36□□□□□ -0.75
TRIM40-207ENST00000396581 A0A1W2PPM0 123 aa10.36□□□□□ -0.75
TRIM40-207ENST00000396581 IGKV2D-40P01614 121 aaPredicted RBP10.36□□□□□ -0.75
TRIM40-207ENST00000396581 IGHG4P01861 327 aa10.36□□□□□ -0.75
TRIM40-207ENST00000396581 PRB4P10163 310 aaPredicted RBP10.36□□□□□ -0.75
TRIM40-207ENST00000396581 ZNF80P51504 273 aaPredicted RBP10.36□□□□□ -0.75
TRIM40-207ENST00000396581 OR11H6Q8NGC7 330 aa10.36□□□□□ -0.75
TRIM40-207ENST00000396581 LRBAP50851 2863 aa10.35□□□□□ -0.75
TRIM40-207ENST00000396581 FXYD7P58549 80 aa10.35□□□□□ -0.75
TRIM40-207ENST00000396581 DKK2Q9UBU2 259 aa10.35□□□□□ -0.75
TRIM40-207ENST00000396581 HHLA3Q9XRX5 114 aa10.35□□□□□ -0.75
TRIM40-207ENST00000396581 HRNRQ86YZ3 2850 aaPredicted RBP10.35□□□□□ -0.75
TRIM40-207ENST00000396581 SMKR1H3BMG3 65 aa10.35□□□□□ -0.75
TRIM40-207ENST00000396581 ODF1Q14990 250 aa10.35□□□□□ -0.75
TRIM40-207ENST00000396581 TWIST1Q15672 202 aa10.35□□□□□ -0.75
TRIM40-207ENST00000396581 KLF17Q5JT82 389 aaPredicted RBP10.35□□□□□ -0.75
TRIM40-207ENST00000396581 TTC9CQ8N5M4 171 aa10.35□□□□□ -0.75
TRIM40-207ENST00000396581 MAP1LC3AQ9H492 121 aa10.35□□□□□ -0.75
TRIM40-207ENST00000396581 HILPDAQ9Y5L2 63 aa10.35□□□□□ -0.75
TRIM40-207ENST00000396581 FLNCQ14315 2725 aa10.34□□□□□ -0.75
TRIM40-207ENST00000396581 FCER1GP30273 86 aa10.34□□□□□ -0.75
TRIM40-207ENST00000396581 C5orf64Q2M2E5 130 aa10.34□□□□□ -0.75
TRIM40-207ENST00000396581 DOPEY1Q5JWR5 2465 aa10.34□□□□□ -0.75
TRIM40-207ENST00000396581 C11orf71Q6IPW1 123 aa10.34□□□□□ -0.75
TRIM40-207ENST00000396581 DPM3Q9P2X0 92 aa10.34□□□□□ -0.75
TRIM40-207ENST00000396581 SMAD5-AS1Q9Y6J3 95 aa10.34□□□□□ -0.75
TRIM40-207ENST00000396581 MYO18BQ8IUG5 2567 aa10.34□□□□□ -0.75
TRIM40-207ENST00000396581 SMIM17P0DL12 118 aa10.34□□□□□ -0.75
TRIM40-207ENST00000396581 HLA-DRB4P13762 266 aa10.34□□□□□ -0.75
TRIM40-207ENST00000396581 EVI2AP22794 236 aa10.34□□□□□ -0.75
TRIM40-207ENST00000396581 NMUP48645 174 aa10.34□□□□□ -0.75
TRIM40-207ENST00000396581 ZNF562Q6V9R5 426 aa10.34□□□□□ -0.75
TRIM40-207ENST00000396581 NXT2Q9NPJ8 142 aaKnown RBP10.34□□□□□ -0.75
TRIM40-207ENST00000396581 C21orf62Q9NYP8 219 aa10.34□□□□□ -0.75
TRIM40-207ENST00000396581 HLA-DRB4X5D2U9 266 aa10.34□□□□□ -0.75
TRIM40-207ENST00000396581 USP9XQ93008 2570 aaPredicted RBP10.33□□□□□ -0.76
TRIM40-207ENST00000396581 DTX2Q86UW9 622 aa10.33□□□□□ -0.76
TRIM40-207ENST00000396581 VGLL1Q99990 258 aa10.33□□□□□ -0.76
TRIM40-207ENST00000396581 SPCS1Q9Y6A9 102 aa10.33□□□□□ -0.76
TRIM40-207ENST00000396581 A0A1W2PPR1 153 aa10.32□□□□□ -0.76
TRIM40-207ENST00000396581 ODF3BA8MYP8 253 aa10.32□□□□□ -0.76
TRIM40-207ENST00000396581 LYNX1G3V0Z9 82 aa10.32□□□□□ -0.76
TRIM40-207ENST00000396581 LYNX1P0DP58 116 aa10.32□□□□□ -0.76
TRIM40-207ENST00000396581 PRSS57Q6UWY2 283 aa10.32□□□□□ -0.76
TRIM40-207ENST00000396581 S4R3C0 116 aa10.32□□□□□ -0.76
TRIM40-207ENST00000396581 IGKV2D-26A0A0A0MRZ7 120 aa10.32□□□□□ -0.76
TRIM40-207ENST00000396581 PRSS47A8MTI9 375 aa10.32□□□□□ -0.76
TRIM40-207ENST00000396581 C19orf84I3L1E1 186 aa10.32□□□□□ -0.76
TRIM40-207ENST00000396581 Q8TAT8 98 aa10.32□□□□□ -0.76
TRIM40-207ENST00000396581 MSRB1Q9NZV6 116 aa10.32□□□□□ -0.76
TRIM40-207ENST00000396581 SMPXQ9UHP9 88 aa10.32□□□□□ -0.76
TRIM40-207ENST00000396581 IGLV2-18A0A075B6J9 118 aa10.31□□□□□ -0.76
TRIM40-207ENST00000396581 FABP5P3A8MUU1 101 aa10.31□□□□□ -0.76
TRIM40-207ENST00000396581 TNFRSF6BO95407 300 aa10.31□□□□□ -0.76
TRIM40-207ENST00000396581 SMIM13P0DJ93 91 aa10.31□□□□□ -0.76
TRIM40-207ENST00000396581 PHLDA1Q8WV24 401 aaPredicted RBP10.31□□□□□ -0.76
TRIM40-207ENST00000396581 ARPC1AQ92747 370 aa10.31□□□□□ -0.76
TRIM40-207ENST00000396581 NAA38Q9BRA0 125 aaKnown RBP10.31□□□□□ -0.76
TRIM40-207ENST00000396581 ABCA1O95477 2261 aa10.31□□□□□ -0.76
TRIM40-207ENST00000396581 ZNF462Q96JM2 2506 aa10.31□□□□□ -0.76
TRIM40-207ENST00000396581 COL12A1Q99715 3063 aa10.31□□□□□ -0.76
TRIM40-207ENST00000396581 RBAKDNA6NC62 111 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 GAS8-AS1O95177 125 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 CTSGP08311 255 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 LEPP41159 167 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 NDPQ00604 133 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 RAB37Q96AX2 223 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 ONECUT1Q9UBC0 465 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 DCHS2Q6V1P9 2916 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 ATP5LO75964 103 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 IGKCP01834 107 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 FABP2P12104 132 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 FXYD2P54710 66 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 TCTAP57738 103 aa10.3□□□□□ -0.76
TRIM40-207ENST00000396581 SRSF1Q07955 248 aaKnown RBP eCLIP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms