RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 REV3LO60673 3130 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 TSC2P49815 1807 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 ARID1AO14497 2285 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 TRBV7-7A0A0K0K1E9 115 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 K7N7A8 449 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 NXPH3O95157 252 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 ZNF688P0C7X2 276 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 ORMDL2Q53FV1 153 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 EBLN2Q6P2I7 272 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 AQP10Q96PS8 301 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 COMMD5Q9GZQ3 224 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 SDF2L1Q9HCN8 221 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 DOCK7Q96N67 2140 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 LCA10Q71F78 164 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 CLDND2Q8NHS1 167 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 NOTCH3Q9UM47 2321 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 PKDREJQ9NTG1 2253 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 LRRC37A2A6NM11 1700 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 IGHV5-10-1A0A0J9YXX1 117 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 PSPHP1O15172 72 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 ANGPTL7O43827 346 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 COX6A1P12074 109 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 IGLL1P15814 213 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 ZNF329Q86UD4 541 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 GPHB5Q86YW7 130 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 SBSPONQ8IVN8 264 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 MORN4Q8NDC4 146 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 SPTSSAQ969W0 71 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 WNK2Q9Y3S1 2297 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 CADP27708 2225 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 FXYD6-FXYD2A0A087WZ82 144 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 TRGV5A0A0B4J1U4 118 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 PPP1R3DO95685 299 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 FXYD6Q9H0Q3 95 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 TP53TG3Q9ULZ0 132 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 KIAA1549Q9HCM3 1950 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 SMCPP49901 116 aaPredicted RBP3.18□□□□□ -1.9
HERC4-204ENST00000395198 HBBP68871 147 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 ZNF627Q7L945 461 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 COX14Q96I36 57 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 SPANXDQ9BXN6 97 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 PTPRBP23467 1997 aa3.18□□□□□ -1.9
HERC4-204ENST00000395198 PLXNA1Q9UIW2 1896 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 PIKFYVEQ9Y2I7 2098 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 TRAV9-2A0A087WT02 112 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 BUB1B-PAK6H3BSN5 160 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 GYPAP02724 150 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 GYPBP06028 91 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 MDKP21741 143 aaPredicted RBP3.17□□□□□ -1.9
HERC4-204ENST00000395198 COL8A2P25067 703 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 PCBD1P61457 104 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 FBXL19-AS1Q494R0 122 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 LINC01555Q8NAE3 123 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 LINC00479Q96M42 142 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 COL4A4P53420 1690 aaPredicted RBP3.17□□□□□ -1.9
HERC4-204ENST00000395198 CST7O76096 145 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 GTSF1Q8WW33 167 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 PPDPFLQ8WWR9 84 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 ZNF702PQ9H963 129 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 IGLV3-16A0A075B6K0 115 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 TRBV5-3A0A0A0MS03 114 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 TRAV14DV4A0A0A6YYC5 116 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 A0A1B0GWA3 101 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 IGLV2-8P01709 118 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 ZNF816Q0VGE8 651 aaPredicted RBP3.17□□□□□ -1.9
HERC4-204ENST00000395198 C16orf47Q6ZP98 133 aaPredicted RBP3.17□□□□□ -1.9
HERC4-204ENST00000395198 C18orf65Q6ZTR6 163 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 CMTM2Q8TAZ6 248 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 ODF3Q96PU9 254 aa3.17□□□□□ -1.9
HERC4-204ENST00000395198 HDHD3Q9BSH5 251 aaPredicted RBP3.17□□□□□ -1.9
HERC4-204ENST00000395198 IGKV1-12A0A0C4DH73 117 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 IGLL5B9A064 214 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 IGKV1D-12P01611 117 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 LGALS3P17931 250 aaKnown RBP3.16□□□□□ -1.9
HERC4-204ENST00000395198 FAUP35544 74 aaKnown RBP3.16□□□□□ -1.9
HERC4-204ENST00000395198 CEMP1Q6PRD7 247 aaPredicted RBP3.16□□□□□ -1.9
HERC4-204ENST00000395198 Q6ZRM9 215 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 UNC80Q8N2C7 3258 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 KANTRA0A1W2PQU2 76 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 NDUFC2-KCTD14E9PQ53 114 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 MFAP2P55001 183 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 REG3GQ6UW15 175 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 C2orf91Q6ZV80 131 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 OR8B2Q96RD0 313 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 RHNO1Q9BSD3 238 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 HIGD1BQ9P298 99 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 USF3Q68DE3 2245 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 MDFIC2A0A1B0GVS7 189 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 IGKV1-16P04430 117 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 HLA-DPB1P04440 258 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 INSL4Q14641 139 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 SPINK14Q6IE38 97 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 ZNF645Q8N7E2 425 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 FAM3DQ96BQ1 224 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 HS3ST6Q96QI5 342 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 ARHGEF17Q96PE2 2063 aaPredicted RBP3.16□□□□□ -1.9
HERC4-204ENST00000395198 IGHV1-69DA0A0B4J2H0 117 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 TRBV27A0A0K0K1C4 114 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 ASAH2BP0C7U1 165 aa3.16□□□□□ -1.9
HERC4-204ENST00000395198 RPL23P62829 140 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms