RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 BAGE3Q86Y29 109 aa11.53□□□□□ -0.56
PRNP-201ENST00000379440 ZNF785A8K8V0 405 aa11.53□□□□□ -0.56
PRNP-201ENST00000379440 LY6EQ16553 131 aa11.53□□□□□ -0.56
PRNP-201ENST00000379440 CLEC19AQ6UXS0 136 aa11.53□□□□□ -0.56
PRNP-201ENST00000379440 LYPD1Q8N2G4 141 aa11.53□□□□□ -0.56
PRNP-201ENST00000379440 RABAC1Q9UI14 185 aa11.53□□□□□ -0.56
PRNP-201ENST00000379440 MOB4Q9Y3A3 225 aa11.53□□□□□ -0.56
PRNP-201ENST00000379440 TNFRSF18Q9Y5U5 241 aa11.53□□□□□ -0.56
PRNP-201ENST00000379440 BMPR1BO00238 502 aa11.53□□□□□ -0.56
PRNP-201ENST00000379440 GPX1P07203 203 aa11.53□□□□□ -0.56
PRNP-201ENST00000379440 MPV17L2Q567V2 206 aa11.53□□□□□ -0.56
PRNP-201ENST00000379440 GTSF1Q8WW33 167 aa11.53□□□□□ -0.56
PRNP-201ENST00000379440 DAZAP1Q96EP5 407 aaKnown RBP11.53□□□□□ -0.56
PRNP-201ENST00000379440 CCDC140Q96MF4 163 aa11.53□□□□□ -0.56
PRNP-201ENST00000379440 GNB4Q9HAV0 340 aa11.53□□□□□ -0.56
PRNP-201ENST00000379440 SMAD5-AS1Q9Y6J3 95 aa11.53□□□□□ -0.56
PRNP-201ENST00000379440 TRAV8-6A0A0B4J262 113 aa11.52□□□□□ -0.57
PRNP-201ENST00000379440 MSMBP08118 114 aa11.52□□□□□ -0.57
PRNP-201ENST00000379440 ARL3P36405 182 aa11.52□□□□□ -0.57
PRNP-201ENST00000379440 HSD52Q0P140 79 aa11.52□□□□□ -0.57
PRNP-201ENST00000379440 COX19Q49B96 90 aa11.52□□□□□ -0.57
PRNP-201ENST00000379440 TM4SF20Q53R12 229 aa11.52□□□□□ -0.57
PRNP-201ENST00000379440 ZNF492Q9P255 531 aa11.52□□□□□ -0.57
PRNP-201ENST00000379440 SCGB2A1O75556 95 aa11.52□□□□□ -0.57
PRNP-201ENST00000379440 HLA-DQA1P01909 254 aa11.52□□□□□ -0.57
PRNP-201ENST00000379440 CAMPP49913 170 aa11.52□□□□□ -0.57
PRNP-201ENST00000379440 IGFL4Q6B9Z1 124 aa11.52□□□□□ -0.57
PRNP-201ENST00000379440 PSG8Q9UQ74 426 aa11.52□□□□□ -0.57
PRNP-201ENST00000379440 A1L4Q6 167 aa11.51□□□□□ -0.57
PRNP-201ENST00000379440 CD5LO43866 347 aa11.51□□□□□ -0.57
PRNP-201ENST00000379440 AVPP01185 164 aa11.51□□□□□ -0.57
PRNP-201ENST00000379440 APCSP02743 223 aa11.51□□□□□ -0.57
PRNP-201ENST00000379440 COL8A1P27658 744 aa11.51□□□□□ -0.57
PRNP-201ENST00000379440 SRIP30626 198 aa11.51□□□□□ -0.57
PRNP-201ENST00000379440 KLK9Q2XQG4 91 aa11.51□□□□□ -0.57
PRNP-201ENST00000379440 TMEM75Q8N9X5 138 aa11.51□□□□□ -0.57
PRNP-201ENST00000379440 ZC2HC1AQ96GY0 325 aa11.51□□□□□ -0.57
PRNP-201ENST00000379440 NRN1Q9NPD7 142 aa11.51□□□□□ -0.57
PRNP-201ENST00000379440 KLK9Q9UKQ9 250 aa11.51□□□□□ -0.57
PRNP-201ENST00000379440 RPL7P18124 248 aaKnown RBP11.51□□□□□ -0.57
PRNP-201ENST00000379440 SRSF1Q07955 248 aaKnown RBP eCLIP11.51□□□□□ -0.57
PRNP-201ENST00000379440 Q0VG73 95 aa11.51□□□□□ -0.57
PRNP-201ENST00000379440 AAMDCQ9H7C9 122 aa11.51□□□□□ -0.57
PRNP-201ENST00000379440 ZFAND3Q9H8U3 227 aa11.51□□□□□ -0.57
PRNP-201ENST00000379440 A8MWL6 223 aa11.5□□□□□ -0.57
PRNP-201ENST00000379440 PDE6HQ13956 83 aa11.5□□□□□ -0.57
PRNP-201ENST00000379440 CD300EQ496F6 205 aaPredicted RBP11.5□□□□□ -0.57
PRNP-201ENST00000379440 BOD1L2Q8IYS8 172 aa11.5□□□□□ -0.57
PRNP-201ENST00000379440 WIPF2Q8TF74 440 aaPredicted RBP11.5□□□□□ -0.57
PRNP-201ENST00000379440 PGLYRP4Q96LB8 373 aa11.5□□□□□ -0.57
PRNP-201ENST00000379440 TRAV41A0A0B4J266 112 aa11.5□□□□□ -0.57
PRNP-201ENST00000379440 IGHV3-66A0A0C4DH42 116 aa11.5□□□□□ -0.57
PRNP-201ENST00000379440 NUDT3O95989 172 aa11.5□□□□□ -0.57
PRNP-201ENST00000379440 PMCHL1Q16048 86 aa11.5□□□□□ -0.57
PRNP-201ENST00000379440 C12orf54Q6X4T0 127 aa11.5□□□□□ -0.57
PRNP-201ENST00000379440 ZNF843Q8N446 348 aa11.5□□□□□ -0.57
PRNP-201ENST00000379440 FAM208BQ5VWN6 2430 aa11.5□□□□□ -0.57
PRNP-201ENST00000379440 IGHV3OR16-13A0A075B7E8 117 aa11.49□□□□□ -0.57
PRNP-201ENST00000379440 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.49□□□□□ -0.57
PRNP-201ENST00000379440 IGHV3-74A0A0B4J1X5 117 aa11.49□□□□□ -0.57
PRNP-201ENST00000379440 TRBV6-1A0A0K0K1D8 114 aa11.49□□□□□ -0.57
PRNP-201ENST00000379440 H3BUX3 64 aa11.49□□□□□ -0.57
PRNP-201ENST00000379440 HLA-DMBP28068 263 aa11.49□□□□□ -0.57
PRNP-201ENST00000379440 BVES-AS1Q5T3Y7 98 aa11.49□□□□□ -0.57
PRNP-201ENST00000379440 GAGE12HA6NDE8 117 aa11.49□□□□□ -0.57
PRNP-201ENST00000379440 NPIPB6E9PJ23 425 aa11.49□□□□□ -0.57
PRNP-201ENST00000379440 UFSP1Q6NVU6 142 aa11.49□□□□□ -0.57
PRNP-201ENST00000379440 EEF1AKMT3Q96AZ1 226 aa11.49□□□□□ -0.57
PRNP-201ENST00000379440 C8orf49Q96NF6 230 aa11.49□□□□□ -0.57
PRNP-201ENST00000379440 RCHY1Q96PM5 261 aa11.49□□□□□ -0.57
PRNP-201ENST00000379440 FBN2P35556 2912 aa11.49□□□□□ -0.57
PRNP-201ENST00000379440 CRIP1P50238 77 aa11.48□□□□□ -0.57
PRNP-201ENST00000379440 CT83Q5H943 113 aa11.48□□□□□ -0.57
PRNP-201ENST00000379440 RASL11AQ6T310 242 aa11.48□□□□□ -0.57
PRNP-201ENST00000379440 IGKV2-40A0A087WW87 121 aaPredicted RBP11.48□□□□□ -0.57
PRNP-201ENST00000379440 MUC21A0A0G2JKD1 596 aa11.48□□□□□ -0.57
PRNP-201ENST00000379440 MUC21A0A140T8X8 626 aa11.48□□□□□ -0.57
PRNP-201ENST00000379440 A0A1B0GXF2 115 aa11.48□□□□□ -0.57
PRNP-201ENST00000379440 ZNF207O43670 478 aaKnown RBP11.48□□□□□ -0.57
PRNP-201ENST00000379440 IGKV2D-40P01614 121 aaPredicted RBP11.48□□□□□ -0.57
PRNP-201ENST00000379440 C19orf54Q5BKX5 351 aa11.48□□□□□ -0.57
PRNP-201ENST00000379440 MUC21Q5SSG8 566 aa11.48□□□□□ -0.57
PRNP-201ENST00000379440 IGHV3-49A0A0A0MS15 119 aa11.47□□□□□ -0.57
PRNP-201ENST00000379440 CLPSL1A2RUU4 121 aa11.47□□□□□ -0.57
PRNP-201ENST00000379440 B4DSR2 109 aa11.47□□□□□ -0.57
PRNP-201ENST00000379440 APOHP02749 345 aaPredicted RBP11.47□□□□□ -0.57
PRNP-201ENST00000379440 C3orf79P0CE67 100 aa11.47□□□□□ -0.57
PRNP-201ENST00000379440 AMTP48728 403 aa11.47□□□□□ -0.57
PRNP-201ENST00000379440 ATP5G2Q06055 141 aa11.47□□□□□ -0.57
PRNP-201ENST00000379440 TRAV9-2A0A087WT02 112 aa11.47□□□□□ -0.57
PRNP-201ENST00000379440 SIVA1O15304 175 aa11.47□□□□□ -0.57
PRNP-201ENST00000379440 BUB3O43684 328 aa11.47□□□□□ -0.57
PRNP-201ENST00000379440 IGHG4P01861 327 aa11.47□□□□□ -0.57
PRNP-201ENST00000379440 CSN1S1P47710 185 aa11.47□□□□□ -0.57
PRNP-201ENST00000379440 OR10J3Q5JRS4 329 aa11.47□□□□□ -0.57
PRNP-201ENST00000379440 Q6ZS46 218 aa11.47□□□□□ -0.57
PRNP-201ENST00000379440 AP1S3Q96PC3 154 aa11.47□□□□□ -0.57
PRNP-201ENST00000379440 TRBV7-1A0A0A6YYK4 115 aa11.46□□□□□ -0.57
PRNP-201ENST00000379440 BLCAPP62952 87 aa11.46□□□□□ -0.57
PRNP-201ENST00000379440 ATOH7Q8N100 152 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms