RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 LINC00205P59089 165 aa7.24□□□□□ -1.25
SYNE1-205ENST00000367251 GAGE13Q4V321 117 aa7.24□□□□□ -1.25
SYNE1-205ENST00000367251 ZNF503-AS2A6NEH8 195 aa7.24□□□□□ -1.25
SYNE1-205ENST00000367251 A8MWV9 139 aa7.24□□□□□ -1.25
SYNE1-205ENST00000367251 LGALS1P09382 135 aaKnown RBP7.24□□□□□ -1.25
SYNE1-205ENST00000367251 COL8A2P25067 703 aa7.24□□□□□ -1.25
SYNE1-205ENST00000367251 SLX1AQ9BQ83 275 aa7.24□□□□□ -1.25
SYNE1-205ENST00000367251 SIGMAR1Q99720 223 aa7.24□□□□□ -1.25
SYNE1-205ENST00000367251 ROS1P08922 2347 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 H3BRN7 92 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 PRR20EP86478 221 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 PRR20CP86479 221 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 PRR20DP86480 221 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 PRR20BP86481 221 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 PRR20AP86496 221 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 WIPF2Q8TF74 440 aaPredicted RBP7.23□□□□□ -1.25
SYNE1-205ENST00000367251 TP53BP1Q12888 1972 aaPredicted RBP7.23□□□□□ -1.25
SYNE1-205ENST00000367251 BCL6BQ8N143 479 aaPredicted RBP7.23□□□□□ -1.25
SYNE1-205ENST00000367251 LINC01619G3V211 115 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 KLF2Q9Y5W3 355 aaPredicted RBP7.23□□□□□ -1.25
SYNE1-205ENST00000367251 PKDREJQ9NTG1 2253 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 CACNA1DQ01668 2161 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 GAGE12JA6NER3 117 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 GAGE1Q13065 139 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 GAGE4Q13068 117 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 GAGE5Q13069 117 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 FAM104BQ5XKR9 115 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 PKIGQ9Y2B9 76 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.23□□□□□ -1.25
SYNE1-205ENST00000367251 HEATR1Q9H583 2144 aaKnown RBP7.23□□□□□ -1.25
SYNE1-205ENST00000367251 OVOL3O00110 214 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 NCR2O95944 276 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 PRB4P10163 310 aaPredicted RBP7.23□□□□□ -1.25
SYNE1-205ENST00000367251 PRIMA1Q86XR5 153 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 ERG28Q9UKR5 140 aa7.23□□□□□ -1.25
SYNE1-205ENST00000367251 hDV102S1A0JD36 115 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 A6NNC1 897 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 K7EM74 188 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 MLANAQ16655 118 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 TMEM158Q8WZ71 300 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 RHPN1-AS1Q9BWJ2 59 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 FAM208BQ5VWN6 2430 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 LY6HO94772 140 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 LOXP28300 417 aaPredicted RBP7.22□□□□□ -1.25
SYNE1-205ENST00000367251 Q8N8P6 123 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 KLK5Q9Y337 293 aaPredicted RBP7.22□□□□□ -1.25
SYNE1-205ENST00000367251 SONP18583 2426 aaKnown RBP7.22□□□□□ -1.25
SYNE1-205ENST00000367251 TIMM17AQ99595 171 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 USF3Q68DE3 2245 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 COL4A4P53420 1690 aaPredicted RBP7.22□□□□□ -1.25
SYNE1-205ENST00000367251 A0A096LPF7 62 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 GAGE12BA1L429 117 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 GAGE7O76087 117 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 GAGE12FP0CL80 117 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 GAGE12GP0CL81 117 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 GAGE12IP0CL82 117 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 CCL18P55774 89 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 GTF3C1Q12789 2109 aa7.22□□□□□ -1.25
SYNE1-205ENST00000367251 MPV17L2Q567V2 206 aa7.21□□□□□ -1.25
SYNE1-205ENST00000367251 TMEM141Q96I45 108 aa7.21□□□□□ -1.25
SYNE1-205ENST00000367251 DNAJC30Q96LL9 226 aa7.21□□□□□ -1.25
SYNE1-205ENST00000367251 DAZ1Q9NQZ3 744 aaKnown RBP7.21□□□□□ -1.25
SYNE1-205ENST00000367251 COX11Q9Y6N1 276 aa7.21□□□□□ -1.25
SYNE1-205ENST00000367251 COA6Q5JTJ3 125 aaKnown RBP7.21□□□□□ -1.25
SYNE1-205ENST00000367251 TTC28Q96AY4 2481 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 K7ENP7 123 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 LEPROTO15243 131 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 LHFPL4Q7Z7J7 247 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 AMN1Q8IY45 258 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 C15orf53Q8NAA6 179 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 DOCK7Q96N67 2140 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 MYO7BQ6PIF6 2116 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 ARMS2P0C7Q2 107 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 IGF2-ASQ6U949 168 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 BOD1L2Q8IYS8 172 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 OVOL2Q9BRP0 275 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 PYGO2Q9BRQ0 406 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 LSM4Q9Y4Z0 139 aaKnown RBP7.21□□□□□ -1.26
SYNE1-205ENST00000367251 TRAV8-1A0A0A6YYK1 113 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 C1orf122Q6ZSJ8 110 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 PLXND1Q9Y4D7 1925 aa7.21□□□□□ -1.26
SYNE1-205ENST00000367251 IGLV2-23P01705 113 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 LGALS9BQ3B8N2 356 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 LGALS9CQ6DKI2 356 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 CYYR1Q96J86 154 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 ZNF407Q9C0G0 2248 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 TRAV8-4A0A0B4J246 113 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 SAA4P35542 130 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 IGFL2Q6UWQ7 119 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 Q8TAT8 98 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 FXYD5Q96DB9 178 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 CSTL1Q9H114 145 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 MEGF9Q9H1U4 602 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 WNK2Q9Y3S1 2297 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 PI4KAP42356 2102 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 KNCNA6PVL3 124 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 CRLF1O75462 422 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 RUSC1-AS1Q66K80 236 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 LINC00479Q96M42 142 aa7.2□□□□□ -1.26
SYNE1-205ENST00000367251 SRSF2Q01130 221 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms