RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 PRSS27Q9BQR3 290 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 TM2D3Q9BRN9 247 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 ESM1Q9NQ30 184 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 MANBALQ9NQG1 85 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 ANAPC10Q9UM13 185 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 LSM2Q9Y333 95 aaKnown RBP1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 KCNE3Q9Y6H6 103 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 HLA-DRB4X5D2U9 266 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 BRCA1P38398 1863 aaKnown RBP1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 SCN8AQ9UQD0 1980 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 LRRK1Q38SD2 2015 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 MICAL3Q7RTP6 2002 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 SLIT1O75093 1534 aa1.3□□□□□ -2.2
RNU4-42P-201ENST00000364738 KDM6BO15054 1643 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 LRP5O75197 1615 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 MYOM1P52179 1685 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 SHPRHQ149N8 1683 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 ALS2Q96Q42 1657 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 UBR1Q8IWV7 1749 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 BTAF1O14981 1849 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 KMT2EQ8IZD2 1858 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 TICRRQ7Z2Z1 1910 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 SCN10AQ9Y5Y9 1956 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 TRAV2A0A0B4J234 112 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 TRAV1-1A0A0B4J248 108 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 IGHV1-24A0A0C4DH33 117 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 TRBV27A0A0K0K1C4 114 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 UBE2L5PA0A1B0GUS4 154 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 RBAKDNA6NC62 111 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 ZNF736B4DX44 427 aaPredicted RBP1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 M0R129 80 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 SDCBPO00560 298 aaPredicted RBP1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 OR1I1O60431 355 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 SCRG1O75711 98 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 CD55P08174 381 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 COL8A2P25067 703 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 CSN1S1P47710 185 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 INSL3P51460 131 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 UBE2G1P62253 170 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 SNRPFP62306 86 aaKnown RBP1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 SNRPGP62308 76 aaKnown RBP1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 UBE2L3P68036 154 aaKnown RBP1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 CCL8P80075 99 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 FUT5Q11128 374 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 ELOCQ15369 112 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 ZNF791Q3KP31 576 aaPredicted RBP1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 ABCA11PQ4W5N1 156 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 FAM78AQ5JUQ0 283 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 FAM222AQ5U5X8 452 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 CFAP126Q5VTH2 177 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 C12orf73Q69YU5 71 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 LGALS9CQ6DKI2 356 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 DNM1P46Q6ZS02 220 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 CYP2G1PQ6ZSU1 146 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 VN1R4Q7Z5H5 301 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 WDR86Q86TI4 376 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 SBSPONQ8IVN8 264 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 OR5AS1Q8N127 324 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 TMEM256Q8N2U0 113 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 WFDC11Q8NEX6 87 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 STAG3L4Q8TBR4 150 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 FAM57AQ8TBR7 257 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 LRRC29Q8WV35 223 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 TOMM6Q96B49 74 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 LINC01600Q96MT4 127 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 HDHD3Q9BSH5 251 aaPredicted RBP1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 CHAC1Q9BUX1 264 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 C11orf68Q9H3H3 251 aaKnown RBP1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 DPH3P1Q9H4G8 78 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 C16orf95Q9H693 158 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 HIGD1BQ9P298 99 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 LINC00527Q9UJ94 153 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 SLIT2O94813 1529 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 FAM208AQ9UK61 1670 aaKnown RBP1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 TJP1Q07157 1748 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 TSC2P49815 1807 aa1.29□□□□□ -2.2
RNU4-42P-201ENST00000364738 ALPK3Q96L96 1907 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 TRBV20OR9-2A0A075B6H5 130 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 TRAV8-3A0A0A6YYJ7 113 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 TRAV17A0A0B4J275 112 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 PIGBOS1A0A0B4J2F0 54 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 MDFIC2A0A1B0GVS7 189 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 LRCOL1A6NCL2 159 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 PSPHP1O15172 72 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 TCL1BO95988 128 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 APCSP02743 223 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 PRH1P02810 166 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 CD7P09564 240 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 IGHV1-2P23083 117 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 CD70P32970 193 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 SSR2P43308 183 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 DAPP51397 102 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 MP68P56378 58 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 SMIM11AP58511 58 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 PCBD1P61457 104 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 SNRPD3P62318 126 aaKnown RBP1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 CACNG7P62955 275 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 HBBP68871 147 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 NSUN5P1Q3KNT7 163 aa1.28□□□□□ -2.2
RNU4-42P-201ENST00000364738 SP6Q3SY56 376 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms