RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 PCNX1Q96RV3 2341 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 GPR179Q6PRD1 2367 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 TRAV26-2A0A0B4J265 109 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 INS-IGF2F8WCM5 200 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 OVOL3O00110 214 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 HLA-DRB4P13762 266 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 GLRXP35754 106 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 GAGE5Q13069 117 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 GAGE6Q13070 117 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 TAL2Q16559 108 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 ZFP2Q6ZN57 461 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 NFE4Q86UQ8 179 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 GATD1Q8NB37 220 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 RAXQ9Y2V3 346 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 HLA-DRB4X5D2U9 266 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 IGHV3-35A0A0C4DH35 117 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 A6NJY4 79 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 SRSF1Q07955 248 aaKnown RBP eCLIP5.99□□□□□ -1.45
BRCA1-201ENST00000352993 PRO0461Q9UI25 63 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 ERG28Q9UKR5 140 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 MALRD1Q5VYJ5 2156 aa5.99□□□□□ -1.45
BRCA1-201ENST00000352993 TRBV20-1A0A075B6N2 111 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 SHISA9B4DS77 424 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 COX7A1P24310 79 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 TMEM30BQ3MIR4 351 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 ASCL5Q7RTU5 278 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 C1orf162Q8NEQ5 155 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-201ENST00000352993 PPDPFLQ8WWR9 84 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 HIF1ANQ9NWT6 349 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 PCSK5Q92824 1860 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 ZNF815PA8K554 130 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 H7C2G1 150 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 IGKV1-17P01599 117 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 IGLV1-44P01699 117 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 IGHV3-23P01764 117 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 SRSF6Q13247 344 aaKnown RBP5.98□□□□□ -1.45
BRCA1-201ENST00000352993 CFAP161Q6P656 301 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 PPP1R27Q86WC6 154 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 PRR25Q96S07 402 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 ZNF71Q9NQZ8 489 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-201ENST00000352993 CACNA1GO43497 2377 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 RAI1Q7Z5J4 1906 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-201ENST00000352993 CUL9Q8IWT3 2517 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 MYMXA0A1B0GTQ4 84 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 A8MWV9 139 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 ZNF80P51504 273 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-201ENST00000352993 LAGE3Q14657 143 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 TTC32Q5I0X7 151 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 KIR2DL4Q99706 377 aa5.98□□□□□ -1.45
BRCA1-201ENST00000352993 TRAV8-2A0A0B4J237 113 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 HLA-DMBP28068 263 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 PAX8Q06710 450 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 TMEM78Q5T7P6 136 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 LYRM7Q5U5X0 104 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 DTX2Q86UW9 622 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 ZMAT4Q9H898 229 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 SIGLEC9Q9Y336 463 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 SLC25A15Q9Y619 301 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 CACNA1BQ00975 2339 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 H3BRN7 92 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 K7EM74 188 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 CFAP126Q5VTH2 177 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 LYPD1Q8N2G4 141 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 SMIM20Q8N5G0 67 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 Q8N8P6 123 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 PIFOQ8TCI5 191 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 SCGB3A1Q96QR1 104 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 DCHS1Q96JQ0 3298 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 A0A087WX48 190 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 TRBV6-1A0A0K0K1D8 114 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 LINC01548A6NM66 108 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 SNCGO76070 127 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 HOXB4P17483 251 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-201ENST00000352993 PLNP26678 52 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 SMCPP49901 116 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-201ENST00000352993 C5orf64Q2M2E5 130 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 SPANXN1Q5VSR9 72 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 ZNF491Q8N8L2 437 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 DEFB104AQ8WTQ1 72 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 RNF185Q96GF1 192 aa5.97□□□□□ -1.45
BRCA1-201ENST00000352993 CNOT1A5YKK6 2376 aaKnown RBP5.97□□□□□ -1.45
BRCA1-201ENST00000352993 FABP5P3A8MUU1 101 aa5.96□□□□□ -1.45
BRCA1-201ENST00000352993 SCGB2A1O75556 95 aa5.96□□□□□ -1.45
BRCA1-201ENST00000352993 HERV-K104P63124 156 aa5.96□□□□□ -1.45
BRCA1-201ENST00000352993 GAGE2BQ13066 116 aa5.96□□□□□ -1.45
BRCA1-201ENST00000352993 ERCC8Q13216 396 aa5.96□□□□□ -1.45
BRCA1-201ENST00000352993 GAGE2EQ4V326 116 aa5.96□□□□□ -1.45
BRCA1-201ENST00000352993 MORN3Q6PF18 240 aaPredicted RBP5.96□□□□□ -1.45
BRCA1-201ENST00000352993 LYPD2Q6UXB3 125 aa5.96□□□□□ -1.45
BRCA1-201ENST00000352993 GAGE2DQ9UEU5 116 aa5.96□□□□□ -1.45
BRCA1-201ENST00000352993 H7C1H1 209 aa5.96□□□□□ -1.46
BRCA1-201ENST00000352993 J3KRW8 73 aa5.96□□□□□ -1.46
BRCA1-201ENST00000352993 TSPAN13O95857 204 aa5.96□□□□□ -1.46
BRCA1-201ENST00000352993 ZNF688P0C7X2 276 aa5.96□□□□□ -1.46
BRCA1-201ENST00000352993 FHL3Q13643 280 aa5.96□□□□□ -1.46
BRCA1-201ENST00000352993 C3orf36Q3SXR2 165 aa5.96□□□□□ -1.46
BRCA1-201ENST00000352993 TRBV7-3A0A075B6L6 115 aa5.96□□□□□ -1.46
BRCA1-201ENST00000352993 RPL7P18124 248 aaKnown RBP5.96□□□□□ -1.46
BRCA1-201ENST00000352993 TEN1Q86WV5 123 aa5.96□□□□□ -1.46
BRCA1-201ENST00000352993 CACNA1AO00555 2505 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms