RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 GAGE5Q13069 117 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 GAGE6Q13070 117 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 SRSF6Q13247 344 aaKnown RBP8.62□□□□□ -1.03
SNX20-201ENST00000300590 C22orf34Q6ZV56 151 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 IGHV3-23P01764 117 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 ARL3P36405 182 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 SPRY4Q9C004 299 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 INS-IGF2F8WCM5 200 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 H3BVH4 76 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 FCN3O75636 299 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 EFNA4P52798 201 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 PAX8Q06710 450 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 MRGPRG-AS1Q2M3A8 158 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 C1orf162Q8NEQ5 155 aaPredicted RBP8.62□□□□□ -1.03
SNX20-201ENST00000300590 TM2D2Q9BX73 214 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 HIGD1BQ9P298 99 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 U3KQK5 164 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 DMXL1Q9Y485 3027 aa8.62□□□□□ -1.03
SNX20-201ENST00000300590 TRAV26-2A0A0B4J265 109 aa8.61□□□□□ -1.03
SNX20-201ENST00000300590 TRBV7-9A0A0J9YWB2 115 aa8.61□□□□□ -1.03
SNX20-201ENST00000300590 PSMB2P49721 201 aa8.61□□□□□ -1.03
SNX20-201ENST00000300590 FAM90A27PA6NNH2 459 aa8.61□□□□□ -1.03
SNX20-201ENST00000300590 COX7A1P24310 79 aa8.61□□□□□ -1.03
SNX20-201ENST00000300590 TMEM95Q3KNT9 176 aa8.61□□□□□ -1.03
SNX20-201ENST00000300590 RNF125Q96EQ8 232 aa8.61□□□□□ -1.03
SNX20-201ENST00000300590 SHANK2-AS3Q9BTD1 123 aa8.61□□□□□ -1.03
SNX20-201ENST00000300590 PGPEP1Q9NXJ5 209 aa8.61□□□□□ -1.03
SNX20-201ENST00000300590 PPP1R27Q86WC6 154 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 TEX29Q8N6K0 151 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 DEFB104AQ8WTQ1 72 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 RPEQ96AT9 228 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 SIGLEC9Q9Y336 463 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 ABCA4P78363 2273 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 TRBV20-1A0A075B6N2 111 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 PRSS29PA6NIE9 313 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 HOXB4P17483 251 aaPredicted RBP8.6□□□□□ -1.03
SNX20-201ENST00000300590 FAM27E3Q08E93 113 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 RRN3P1Q2M238 152 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 FDCSPQ8NFU4 85 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 MYOZ3Q8TDC0 251 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 TMEM14CQ9P0S9 112 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 LINC01548A6NM66 108 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 LAMTOR5O43504 91 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 NDUFB3O43676 98 aa8.6□□□□□ -1.03
SNX20-201ENST00000300590 ZNF474Q6S9Z5 364 aaPredicted RBP8.6□□□□□ -1.03
SNX20-201ENST00000300590 SPTBN1Q01082 2364 aaKnown RBP8.59□□□□□ -1.03
SNX20-201ENST00000300590 FOXI1Q12951 378 aa8.59□□□□□ -1.03
SNX20-201ENST00000300590 ZNF491Q8N8L2 437 aa8.59□□□□□ -1.03
SNX20-201ENST00000300590 NCBP2LA6PVI3 153 aaKnown RBP8.59□□□□□ -1.03
SNX20-201ENST00000300590 XGP55808 180 aa8.59□□□□□ -1.03
SNX20-201ENST00000300590 ZFAND6Q6FIF0 208 aa8.59□□□□□ -1.03
SNX20-201ENST00000300590 GATD1Q8NB37 220 aa8.59□□□□□ -1.03
SNX20-201ENST00000300590 C1QTNF4Q9BXJ3 329 aa8.59□□□□□ -1.03
SNX20-201ENST00000300590 LINC00574Q9H8X3 128 aa8.59□□□□□ -1.03
SNX20-201ENST00000300590 CTSZQ9UBR2 303 aa8.59□□□□□ -1.03
SNX20-201ENST00000300590 OR11H12B2RN74 326 aa8.59□□□□□ -1.04
SNX20-201ENST00000300590 HOXA3O43365 443 aaPredicted RBP8.59□□□□□ -1.04
SNX20-201ENST00000300590 ERCC8Q13216 396 aa8.59□□□□□ -1.04
SNX20-201ENST00000300590 ZFP2Q6ZN57 461 aa8.59□□□□□ -1.04
SNX20-201ENST00000300590 OR11H1Q8NG94 326 aa8.59□□□□□ -1.04
SNX20-201ENST00000300590 OR11H2Q8NH07 326 aa8.59□□□□□ -1.04
SNX20-201ENST00000300590 RNF185Q96GF1 192 aa8.59□□□□□ -1.04
SNX20-201ENST00000300590 PRR25Q96S07 402 aa8.59□□□□□ -1.04
SNX20-201ENST00000300590 SPRY2O43597 315 aa8.58□□□□□ -1.04
SNX20-201ENST00000300590 GATA4P43694 442 aa8.58□□□□□ -1.04
SNX20-201ENST00000300590 NFE4Q86UQ8 179 aa8.58□□□□□ -1.04
SNX20-201ENST00000300590 PRSS33Q8NF86 280 aa8.58□□□□□ -1.04
SNX20-201ENST00000300590 ERG28Q9UKR5 140 aa8.58□□□□□ -1.04
SNX20-201ENST00000300590 ARHGAP32A7KAX9 2087 aa8.58□□□□□ -1.04
SNX20-201ENST00000300590 LINC01549A6NIU2 74 aa8.58□□□□□ -1.04
SNX20-201ENST00000300590 H3BRN7 92 aa8.58□□□□□ -1.04
SNX20-201ENST00000300590 I3L2K1 104 aa8.58□□□□□ -1.04
SNX20-201ENST00000300590 Q6ZUT4 128 aa8.58□□□□□ -1.04
SNX20-201ENST00000300590 DKK4Q9UBT3 224 aa8.58□□□□□ -1.04
SNX20-201ENST00000300590 PRO0461Q9UI25 63 aa8.58□□□□□ -1.04
SNX20-201ENST00000300590 IGLV3-9A0A075B6K5 115 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 IGHV3OR16-13A0A075B7E8 117 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 IGHV3-74A0A0B4J1X5 117 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 TEX22C9J3V5 150 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 TSPAN13O95857 204 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 SRSF9Q13242 221 aaKnown RBP eCLIP8.57□□□□□ -1.04
SNX20-201ENST00000300590 SCGB1D4Q6XE38 83 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 DTX2Q86UW9 622 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 ZNF502Q8TBZ5 544 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 ARRDC1-AS1Q9H2J1 176 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 ZMAT4Q9H898 229 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 NXT2Q9NPJ8 142 aaKnown RBP8.57□□□□□ -1.04
SNX20-201ENST00000300590 SPTBN2O15020 2390 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 PIEZO2Q9H5I5 2752 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 TRGV3P03979 118 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 HLA-DRB4P13762 266 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 CDIP1Q9H305 208 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 HLA-DRB4X5D2U9 266 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 ATP5LO75964 103 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 FHL3Q13643 280 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 CITED1Q99966 193 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 VKORC1Q9BQB6 163 aa8.57□□□□□ -1.04
SNX20-201ENST00000300590 K7EM74 188 aa8.56□□□□□ -1.04
SNX20-201ENST00000300590 SEM1Q6ZVN7 128 aa8.56□□□□□ -1.04
SNX20-201ENST00000300590 HIF1ANQ9NWT6 349 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms