RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 HILPDAQ9Y5L2 63 aa10.09□□□□□ -0.79
C9orf3-201ENST00000277198 MINOS1-NBL1R4GNA1 71 aa10.09□□□□□ -0.79
C9orf3-201ENST00000277198 ABCA2Q9BZC7 2435 aa10.08□□□□□ -0.8
C9orf3-201ENST00000277198 CD24P25063 80 aa10.08□□□□□ -0.8
C9orf3-201ENST00000277198 HINT1P49773 126 aaPredicted RBP10.08□□□□□ -0.8
C9orf3-201ENST00000277198 KRTAP1-1Q07627 177 aa10.08□□□□□ -0.8
C9orf3-201ENST00000277198 LINC01545Q5VT33 79 aa10.08□□□□□ -0.8
C9orf3-201ENST00000277198 C21orf62Q9NYP8 219 aa10.08□□□□□ -0.8
C9orf3-201ENST00000277198 COX11Q9Y6N1 276 aa10.08□□□□□ -0.8
C9orf3-201ENST00000277198 U3KQK5 164 aa10.08□□□□□ -0.8
C9orf3-201ENST00000277198 TOX4O94842 621 aa10.08□□□□□ -0.8
C9orf3-201ENST00000277198 RPS20P60866 119 aaKnown RBP10.08□□□□□ -0.8
C9orf3-201ENST00000277198 SLC25A34Q6PIV7 304 aa10.08□□□□□ -0.8
C9orf3-201ENST00000277198 Q8N6K4 173 aa10.08□□□□□ -0.8
C9orf3-201ENST00000277198 OR10AG1Q8NH19 301 aa10.08□□□□□ -0.8
C9orf3-201ENST00000277198 ANK3Q12955 4377 aaKnown RBP10.08□□□□□ -0.8
C9orf3-201ENST00000277198 ABCA1O95477 2261 aa10.08□□□□□ -0.8
C9orf3-201ENST00000277198 F8W735 103 aaPredicted RBP10.07□□□□□ -0.8
C9orf3-201ENST00000277198 SRSF2Q01130 221 aaKnown RBP10.07□□□□□ -0.8
C9orf3-201ENST00000277198 HES1Q14469 280 aa10.07□□□□□ -0.8
C9orf3-201ENST00000277198 FA2HQ7L5A8 372 aa10.07□□□□□ -0.8
C9orf3-201ENST00000277198 PMCHL2Q9BQD1 86 aa10.07□□□□□ -0.8
C9orf3-201ENST00000277198 CR1P17927 2039 aa10.07□□□□□ -0.8
C9orf3-201ENST00000277198 A0A096LNT2 108 aa10.06□□□□□ -0.8
C9orf3-201ENST00000277198 TMEM189A5PLL7 270 aa10.06□□□□□ -0.8
C9orf3-201ENST00000277198 M0R3E3 92 aa10.06□□□□□ -0.8
C9orf3-201ENST00000277198 C12orf54Q6X4T0 127 aa10.06□□□□□ -0.8
C9orf3-201ENST00000277198 LINC00173Q6ZV60 143 aa10.06□□□□□ -0.8
C9orf3-201ENST00000277198 PRSS3P2Q8NHM4 247 aa10.06□□□□□ -0.8
C9orf3-201ENST00000277198 DPF1Q92782 380 aa10.06□□□□□ -0.8
C9orf3-201ENST00000277198 ZNF747Q9BV97 191 aa10.06□□□□□ -0.8
C9orf3-201ENST00000277198 BMI1P35226 326 aa10.06□□□□□ -0.8
C9orf3-201ENST00000277198 RAB9AP51151 201 aa10.06□□□□□ -0.8
C9orf3-201ENST00000277198 KLK9Q2XQG4 91 aa10.06□□□□□ -0.8
C9orf3-201ENST00000277198 SCRT2Q9NQ03 307 aa10.06□□□□□ -0.8
C9orf3-201ENST00000277198 KLK9Q9UKQ9 250 aa10.06□□□□□ -0.8
C9orf3-201ENST00000277198 HIVEP2P31629 2446 aa10.06□□□□□ -0.8
C9orf3-201ENST00000277198 JMJD1CQ15652 2540 aa10.05□□□□□ -0.8
C9orf3-201ENST00000277198 EFNA4P52798 201 aa10.05□□□□□ -0.8
C9orf3-201ENST00000277198 UBE2V1Q13404 147 aa10.05□□□□□ -0.8
C9orf3-201ENST00000277198 KLF17Q5JT82 389 aaPredicted RBP10.05□□□□□ -0.8
C9orf3-201ENST00000277198 FAM104BQ5XKR9 115 aa10.05□□□□□ -0.8
C9orf3-201ENST00000277198 ZNF138P52744 262 aa10.05□□□□□ -0.8
C9orf3-201ENST00000277198 VMO1Q7Z5L0 202 aa10.05□□□□□ -0.8
C9orf3-201ENST00000277198 ORMDL3Q8N138 153 aa10.05□□□□□ -0.8
C9orf3-201ENST00000277198 PRR25Q96S07 402 aa10.05□□□□□ -0.8
C9orf3-201ENST00000277198 NPFFR1Q9GZQ6 430 aa10.05□□□□□ -0.8
C9orf3-201ENST00000277198 RABAC1Q9UI14 185 aa10.05□□□□□ -0.8
C9orf3-201ENST00000277198 CUBNO60494 3623 aa10.04□□□□□ -0.8
C9orf3-201ENST00000277198 hDV102S1A0JD36 115 aa10.04□□□□□ -0.8
C9orf3-201ENST00000277198 SH2D1AO60880 128 aa10.04□□□□□ -0.8
C9orf3-201ENST00000277198 PTTG1IPP53801 180 aa10.04□□□□□ -0.8
C9orf3-201ENST00000277198 PRR31Q5SQ13 230 aa10.04□□□□□ -0.8
C9orf3-201ENST00000277198 CLEC2AQ6UVW9 174 aa10.04□□□□□ -0.8
C9orf3-201ENST00000277198 LYZL1Q6UWQ5 148 aa10.04□□□□□ -0.8
C9orf3-201ENST00000277198 C10orf105Q8TEF2 133 aa10.04□□□□□ -0.8
C9orf3-201ENST00000277198 C8orf49Q96NF6 230 aa10.04□□□□□ -0.8
C9orf3-201ENST00000277198 NCBP2LA6PVI3 153 aaKnown RBP10.03□□□□□ -0.8
C9orf3-201ENST00000277198 CSN3P07498 182 aa10.03□□□□□ -0.8
C9orf3-201ENST00000277198 CTSGP08311 255 aa10.03□□□□□ -0.8
C9orf3-201ENST00000277198 KLRD1Q13241 179 aa10.03□□□□□ -0.8
C9orf3-201ENST00000277198 INAFM1C9JVW0 142 aa10.03□□□□□ -0.8
C9orf3-201ENST00000277198 TCF21O43680 179 aa10.03□□□□□ -0.8
C9orf3-201ENST00000277198 NDPQ00604 133 aa10.03□□□□□ -0.8
C9orf3-201ENST00000277198 HIST1H1AQ02539 215 aaPredicted RBP10.03□□□□□ -0.8
C9orf3-201ENST00000277198 RELQ04864 619 aaPredicted RBP10.03□□□□□ -0.8
C9orf3-201ENST00000277198 UNQ5815/PRO19632Q6UWF5 114 aa10.03□□□□□ -0.8
C9orf3-201ENST00000277198 CBY1Q9Y3M2 126 aa10.03□□□□□ -0.8
C9orf3-201ENST00000277198 FAM106CPP0CH98 169 aa10.02□□□□□ -0.81
C9orf3-201ENST00000277198 COX8AP10176 69 aa10.02□□□□□ -0.81
C9orf3-201ENST00000277198 MPV17L2Q567V2 206 aa10.02□□□□□ -0.81
C9orf3-201ENST00000277198 BVES-AS1Q5T3Y7 98 aa10.02□□□□□ -0.81
C9orf3-201ENST00000277198 BCL6BQ8N143 479 aaPredicted RBP10.02□□□□□ -0.81
C9orf3-201ENST00000277198 PRELID3AQ96N28 172 aa10.02□□□□□ -0.81
C9orf3-201ENST00000277198 TPPP3Q9BW30 176 aa10.02□□□□□ -0.81
C9orf3-201ENST00000277198 CNFNQ9BYD5 112 aa10.02□□□□□ -0.81
C9orf3-201ENST00000277198 A0A087X0K7 114 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 IGHV7-81A0A0B4J1V7 117 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 IGHV4-61A0A0C4DH41 118 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 RBAKDNA6NC62 111 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 D6R8Y8 96 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 CCL25O15444 150 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 IGLC6P0CF74 106 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 TMEM11P17152 192 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 RIPPLY3P57055 190 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 LGALS9BQ3B8N2 356 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 LGALS9CQ6DKI2 356 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 DEFB125Q8N687 156 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 OR1N2Q8NGR9 330 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 BPESC1Q9GZL8 116 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 SIGLEC8Q9NYZ4 499 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 IGHV2-70DA0A0C4DH43 119 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 NUDT3O95989 172 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 PPBPP02775 128 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 EGR2P11161 476 aaPredicted RBP10.01□□□□□ -0.81
C9orf3-201ENST00000277198 IFI27P40305 119 aaPredicted RBP10.01□□□□□ -0.81
C9orf3-201ENST00000277198 PSMG4Q5JS54 123 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 FER1L6-AS1Q8NA97 138 aa10.01□□□□□ -0.81
C9orf3-201ENST00000277198 FAM110DQ8TAY7 271 aaPredicted RBP10.01□□□□□ -0.81
C9orf3-201ENST00000277198 S4R3C0 116 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms