RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 LOXL1Q08397 574 aaPredicted RBP14.65□□□□□ -0.06
YBX3-201ENST00000228251 UNQ9165/PRO28630Q6UXU0 137 aa14.65□□□□□ -0.06
YBX3-201ENST00000228251 ZNF493Q6ZR52 646 aa14.65□□□□□ -0.06
YBX3-201ENST00000228251 FAM19A2Q8N3H0 131 aa14.65□□□□□ -0.06
YBX3-201ENST00000228251 ZANQ9Y493 2812 aa14.65□□□□□ -0.06
YBX3-201ENST00000228251 POLQO75417 2590 aa14.65□□□□□ -0.06
YBX3-201ENST00000228251 CENPEQ02224 2701 aa14.65□□□□□ -0.06
YBX3-201ENST00000228251 IGHV3-49A0A0A0MS15 119 aa14.65□□□□□ -0.06
YBX3-201ENST00000228251 KRTAP10-9P60411 292 aa14.65□□□□□ -0.06
YBX3-201ENST00000228251 REC114Q7Z4M0 266 aa14.65□□□□□ -0.06
YBX3-201ENST00000228251 KMT2BQ9UMN6 2715 aaPredicted RBP14.64□□□□□ -0.07
YBX3-201ENST00000228251 A1L4Q6 167 aa14.64□□□□□ -0.07
YBX3-201ENST00000228251 IGLC6P0CF74 106 aa14.64□□□□□ -0.07
YBX3-201ENST00000228251 CTRLP40313 264 aa14.64□□□□□ -0.07
YBX3-201ENST00000228251 ERCC8Q13216 396 aa14.64□□□□□ -0.07
YBX3-201ENST00000228251 DEFB112Q30KQ8 113 aa14.64□□□□□ -0.07
YBX3-201ENST00000228251 FAM209BQ5JX69 171 aa14.64□□□□□ -0.07
YBX3-201ENST00000228251 BMI1P35226 326 aa14.63□□□□□ -0.07
YBX3-201ENST00000228251 DEFA6Q01524 100 aa14.63□□□□□ -0.07
YBX3-201ENST00000228251 DMRTA1Q5VZB9 504 aa14.63□□□□□ -0.07
YBX3-201ENST00000228251 GPHB5Q86YW7 130 aa14.63□□□□□ -0.07
YBX3-201ENST00000228251 PPP1R14DQ9NXH3 145 aa14.63□□□□□ -0.07
YBX3-201ENST00000228251 PTPN13Q12923 2485 aa14.63□□□□□ -0.07
YBX3-201ENST00000228251 SMAD7O15105 426 aaKnown RBP14.62□□□□□ -0.07
YBX3-201ENST00000228251 IGHV4-59P01825 116 aa14.62□□□□□ -0.07
YBX3-201ENST00000228251 C3orf79P0CE67 100 aa14.62□□□□□ -0.07
YBX3-201ENST00000228251 TDRG1Q3Y452 100 aa14.62□□□□□ -0.07
YBX3-201ENST00000228251 LYZL1Q6UWQ5 148 aa14.62□□□□□ -0.07
YBX3-201ENST00000228251 AGPAT4-IT1Q9H0P7 198 aa14.62□□□□□ -0.07
YBX3-201ENST00000228251 HSBP1O75506 76 aa14.62□□□□□ -0.07
YBX3-201ENST00000228251 ZNF705DP0CH99 300 aaPredicted RBP14.62□□□□□ -0.07
YBX3-201ENST00000228251 ZNF705BP0CI00 300 aaPredicted RBP14.62□□□□□ -0.07
YBX3-201ENST00000228251 RPS20P60866 119 aaKnown RBP14.62□□□□□ -0.07
YBX3-201ENST00000228251 C9orf47Q6ZRZ4 202 aa14.62□□□□□ -0.07
YBX3-201ENST00000228251 NDUFAF3Q9BU61 184 aa14.62□□□□□ -0.07
YBX3-201ENST00000228251 PRRC2AP48634 2157 aaKnown RBP14.62□□□□□ -0.07
YBX3-201ENST00000228251 SOCS3O14543 225 aa14.61□□□□□ -0.07
YBX3-201ENST00000228251 PF4V1P10720 104 aa14.61□□□□□ -0.07
YBX3-201ENST00000228251 KRTDAPP60985 99 aa14.61□□□□□ -0.07
YBX3-201ENST00000228251 CHCHD1Q96BP2 118 aaKnown RBP14.61□□□□□ -0.07
YBX3-201ENST00000228251 CLEC5AQ9NY25 188 aa14.61□□□□□ -0.07
YBX3-201ENST00000228251 TMSB15BA0A087X1C1 80 aa14.6□□□□□ -0.07
YBX3-201ENST00000228251 RNASEKQ6P5S7 137 aaKnown RBP14.6□□□□□ -0.07
YBX3-201ENST00000228251 C9orf139Q6ZV77 190 aa14.6□□□□□ -0.07
YBX3-201ENST00000228251 IL17RELQ6ZVW7 336 aa14.6□□□□□ -0.07
YBX3-201ENST00000228251 OR4X2Q8NGF9 303 aa14.6□□□□□ -0.07
YBX3-201ENST00000228251 C20orf144Q9BQM9 153 aa14.6□□□□□ -0.07
YBX3-201ENST00000228251 CNFNQ9BYD5 112 aa14.6□□□□□ -0.07
YBX3-201ENST00000228251 FABP5P3A8MUU1 101 aa14.6□□□□□ -0.07
YBX3-201ENST00000228251 IGHV3-11P01762 117 aa14.6□□□□□ -0.07
YBX3-201ENST00000228251 IGHV4-31P0DP07 118 aa14.6□□□□□ -0.07
YBX3-201ENST00000228251 NTF3P20783 257 aa14.6□□□□□ -0.07
YBX3-201ENST00000228251 LINC01559Q495D7 138 aa14.6□□□□□ -0.07
YBX3-201ENST00000228251 LCNL1Q6ZST4 164 aa14.6□□□□□ -0.07
YBX3-201ENST00000228251 MAPK1IP1LQ8NDC0 245 aa14.6□□□□□ -0.07
YBX3-201ENST00000228251 BEX4Q9NWD9 120 aaPredicted RBP14.6□□□□□ -0.07
YBX3-201ENST00000228251 A0A0G2JLM5 398 aa14.59□□□□□ -0.07
YBX3-201ENST00000228251 FAM181BA6NEQ2 426 aa14.59□□□□□ -0.07
YBX3-201ENST00000228251 C2orf70A6NJV1 201 aa14.59□□□□□ -0.07
YBX3-201ENST00000228251 M0QZ24 198 aa14.59□□□□□ -0.07
YBX3-201ENST00000228251 TGFAP01135 160 aa14.59□□□□□ -0.07
YBX3-201ENST00000228251 LRRC75A-AS1Q8N1F1 130 aa14.59□□□□□ -0.07
YBX3-201ENST00000228251 U3KQK5 164 aa14.59□□□□□ -0.07
YBX3-201ENST00000228251 TMEM213A2RRL7 107 aa14.58□□□□□ -0.08
YBX3-201ENST00000228251 RNF223E7ERA6 249 aa14.58□□□□□ -0.08
YBX3-201ENST00000228251 PSMB8P28062 276 aa14.58□□□□□ -0.08
YBX3-201ENST00000228251 ZNF138P52744 262 aa14.58□□□□□ -0.08
YBX3-201ENST00000228251 TMEM95Q3KNT9 176 aa14.58□□□□□ -0.08
YBX3-201ENST00000228251 EBLN2Q6P2I7 272 aa14.58□□□□□ -0.08
YBX3-201ENST00000228251 C20orf173Q96LM9 149 aa14.58□□□□□ -0.08
YBX3-201ENST00000228251 M0R2Z0 102 aa14.57□□□□□ -0.08
YBX3-201ENST00000228251 BORCS7Q96B45 105 aa14.57□□□□□ -0.08
YBX3-201ENST00000228251 NPFFR1Q9GZQ6 430 aa14.57□□□□□ -0.08
YBX3-201ENST00000228251 DEFB113Q30KQ7 82 aa14.57□□□□□ -0.08
YBX3-201ENST00000228251 FAM104BQ5XKR9 115 aa14.57□□□□□ -0.08
YBX3-201ENST00000228251 FER1L6-AS1Q8NA97 138 aa14.57□□□□□ -0.08
YBX3-201ENST00000228251 TPPP3Q9BW30 176 aa14.57□□□□□ -0.08
YBX3-201ENST00000228251 C11orf21Q9P2W6 132 aa14.57□□□□□ -0.08
YBX3-201ENST00000228251 IGHV1-24A0A0C4DH33 117 aa14.56□□□□□ -0.08
YBX3-201ENST00000228251 TMEM89A2RUT3 159 aa14.56□□□□□ -0.08
YBX3-201ENST00000228251 LINC00614P0C842 121 aa14.56□□□□□ -0.08
YBX3-201ENST00000228251 CYB5R2Q6BCY4 276 aa14.56□□□□□ -0.08
YBX3-201ENST00000228251 HIST1H1AQ02539 215 aaPredicted RBP14.55□□□□□ -0.08
YBX3-201ENST00000228251 KRTAP1-3Q8IUG1 177 aa14.55□□□□□ -0.08
YBX3-201ENST00000228251 C16orf92Q96LL3 132 aa14.55□□□□□ -0.08
YBX3-201ENST00000228251 ABCA12Q86UK0 2595 aa14.55□□□□□ -0.08
YBX3-201ENST00000228251 MXRA5Q9NR99 2828 aa14.55□□□□□ -0.08
YBX3-201ENST00000228251 CHD6Q8TD26 2715 aa14.55□□□□□ -0.08
YBX3-201ENST00000228251 IGKV3D-20A0A0C4DH25 116 aa14.55□□□□□ -0.08
YBX3-201ENST00000228251 IGHV7-4-1A0A0J9YVY3 117 aa14.55□□□□□ -0.08
YBX3-201ENST00000228251 TMEM78Q5T7P6 136 aa14.55□□□□□ -0.08
YBX3-201ENST00000228251 VAMP8Q9BV40 100 aa14.55□□□□□ -0.08
YBX3-201ENST00000228251 LENEPQ9Y5L5 61 aa14.55□□□□□ -0.08
YBX3-201ENST00000228251 APCP25054 2843 aa14.53□□□□□ -0.08
YBX3-201ENST00000228251 K7EMT4 169 aa14.53□□□□□ -0.08
YBX3-201ENST00000228251 ORM1P02763 201 aa14.53□□□□□ -0.08
YBX3-201ENST00000228251 Q6YL49 198 aa14.53□□□□□ -0.08
YBX3-201ENST00000228251 PEF1Q9UBV8 284 aaKnown RBP14.53□□□□□ -0.08
YBX3-201ENST00000228251 VPREB3Q9UKI3 123 aa14.53□□□□□ -0.08
YBX3-201ENST00000228251 NAV2Q8IVL1 2488 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms