RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Tnrc6aQ3UHK8 1896 aaKnown RBP8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Flg2Q2VIS4 2362 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ighv1-47A0A0A6YY41 117 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm6665F6Y363 85 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm21789J3QMZ1 123 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm21870J3QPN2 123 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm21883J3QPV3 123 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Pde6dO55057 150 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Lgals3P16110 264 aaKnown RBP8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gpank1Q61858 372 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr917Q7TRC3 309 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Fam214bQ8BR27 538 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr1457Q8VFK3 317 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr195Q8VGQ6 308 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Mgst1Q91VS7 155 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Tex43Q9D9I1 141 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Dda1Q9D9Z5 102 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Tcf20Q9EPQ8 1987 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ighv5-4A0A075B5P9 117 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Cldn34c4A2ANA3 212 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm4791J3QQ14 102 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr358Q7TRY5 330 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Dppa1Q810Y7 116 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Cbln1Q9R171 193 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ramp3Q9WUP1 147 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Lnp1A0A1B0GSK3 178 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm9602J3QPD5 205 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Degs1O09005 323 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Pax5Q02650 391 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Rac2Q05144 192 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Shisa6Q3UH99 525 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 C1qtnf9Q4ZJN1 333 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Taar4Q5QD15 347 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Vdac2Q60930 295 aaKnown RBP8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Slc36a4Q8CH36 500 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Fam174bQ8K064 153 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr968Q8VFN4 314 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Anapc16Q9CPV2 110 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Vmn1r171Q9EPS6 316 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Trav13n-4A0A0G2JG01 110 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm44596A0A0N4SVA0 210 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Wdr86D3Z757 380 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ifitm7G3X9Z2 141 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Khdc1bP0C7A0 126 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Defa-rs1P17533 116 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Rplp1P47955 114 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Scgb2b24Q7M747 112 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr470Q8VF65 314 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Vmn1r54Q9EPB8 315 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Foxj2Q9ES18 565 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 St6galnac3Q9WUV2 305 aa8.16□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ighv1-34A0A075B5V2 117 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Cpsf4lE9Q2N0 280 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gata2O09100 480 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 P06323 132 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Znf474Q6V5K9 347 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Smim12Q78RX3 92 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ndufv3Q8BK30 104 aaKnown RBP8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ido2Q8R0V5 405 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr482Q8VG03 323 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm10306Q9CUK2 115 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 4931428L18RikQ9D4S9 127 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Dchs2A0A0A6YW72 3346 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gpm6bP35803 328 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Zfp936Q3ULA8 456 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Cd200r3Q5UKY4 296 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Bud31Q6PGH1 103 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Trib1Q8K4K4 372 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 H2al3Q9D4U4 128 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Vmn1r50Q9EP51 310 aa8.15□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Foxf2O54743 446 aa8.15□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Aqp7O54794 303 aa8.15□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 P01915 264 aa8.15□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Sumo1P63166 101 aaKnown RBP8.15□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 ApohQ01339 345 aa8.15□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 C1ql4Q4ZJM9 238 aa8.15□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Bpifb3Q80ZU7 473 aa8.15□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Fam241aQ9CZL2 131 aa8.15□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Tmem126bQ9D1R1 230 aa8.15□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Supt4h1bQ9Z199 117 aa8.15□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Sfrp4Q9Z1N6 351 aa8.15□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Pcnx2Q5DU28 2122 aa8.15□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 D830044I16RikA0A1D5RM53 117 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Zfp931A2AHM2 298 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Twist1P26687 206 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 C5ar1P30993 351 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 RhobP62746 196 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr1181Q7TR18 311 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 BsxQ810B3 232 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Msrb3Q8BU85 253 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr1183Q8VFF8 303 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Olfr1462Q8VFW3 307 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Nicn1Q9CQM0 213 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Fstl3Q9EQC7 256 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 CnmdQ9Z1F6 334 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Spg11Q3UHA3 2430 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 H60bB1B212 251 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 Gm10638F6QEG2 257 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 PpyP10601 100 aa8.14□□□□□ -1.11
Pcdh1-201ENSMUST00000057185 MgpP19788 104 aa8.14□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms