RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 OR4S2Q8NH73 311 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 TCTEX1D2Q8WW35 142 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 UPK3BQ9BT76 320 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 DCUN1D5Q9BTE7 237 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 C9orf16Q9BUW7 83 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 SLC35B3Q9H1N7 401 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 VCX3AQ9NNX9 186 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 CCL28Q9NRJ3 127 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 CKLFQ9UBR5 152 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 RABAC1Q9UI14 185 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 RCL1Q9Y2P8 373 aaKnown RBP1.94□□□□□ -2.1
CDKL5-208ENST00000624953 AP4S1Q9Y587 144 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 PUS1Q9Y606 427 aaKnown RBP eCLIP1.94□□□□□ -2.1
CDKL5-208ENST00000624953 LOC100130705A0A1B0GUX0 176 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 A8MTW9 85 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 F6UB75 175 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 H0Y9J4 135 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 M0QXV9 152 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 DNASE2O00115 360 aaPredicted RBP1.93□□□□□ -2.1
CDKL5-208ENST00000624953 SULT1C2O00338 296 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 CRXO43186 299 aaPredicted RBP1.93□□□□□ -2.1
CDKL5-208ENST00000624953 YIF1AO95070 293 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 ATP6V1G2O95670 118 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 DHFRP00374 187 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 MT-CO2P00403 227 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 IGKV1-39P01597 117 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 IGKV1-17P01599 117 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 IGKV1D-39P04432 117 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 UCHL1P09936 223 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 HLA-DRB4P13762 266 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 HIST1H1DP16402 221 aaKnown RBP1.93□□□□□ -2.1
CDKL5-208ENST00000624953 PMCHP20382 165 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 NPY1RP25929 384 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 OR10A3P58181 314 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 ASAH1Q13510 395 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 ACSM3Q53FZ2 586 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 RBM48Q5RL73 367 aaKnown RBP1.93□□□□□ -2.1
CDKL5-208ENST00000624953 UFSP1Q6NVU6 142 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 AMTNQ6UX39 209 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 ZNF818PQ6ZRF7 136 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 Q6ZSA8 131 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 ARRDC1Q8N5I2 433 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 DUSP18Q8NEJ0 188 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 ZNF555Q8NEP9 628 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 VSTM2AQ8TAG5 236 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 PYDC1Q8WXC3 89 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 SLC25A46Q96AG3 418 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 CENPNQ96H22 339 aaPredicted RBP1.93□□□□□ -2.1
CDKL5-208ENST00000624953 HSD17B10Q99714 261 aaKnown RBP1.93□□□□□ -2.1
CDKL5-208ENST00000624953 GINS4Q9BRT9 223 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 ACTR3CQ9C0K3 210 aaPredicted RBP1.93□□□□□ -2.1
CDKL5-208ENST00000624953 DCSTAMPQ9H295 470 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 HRASLSQ9HDD0 168 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 KCNIP3Q9Y2W7 256 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 LSM2Q9Y333 95 aaKnown RBP1.93□□□□□ -2.1
CDKL5-208ENST00000624953 PRELID3BQ9Y3B1 194 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 RFNGQ9Y644 331 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 HLA-DRB4X5D2U9 266 aa1.93□□□□□ -2.1
CDKL5-208ENST00000624953 LOC100131303A0A0U1RQF7 123 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 IRGMA1A4Y4 181 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 RAB19A4D1S5 217 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 TMEM189A5PLL7 270 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 LRCOL1A6NCL2 159 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 FABP12A6NFH5 140 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 SMIM9A6NGZ8 99 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 ZNF705GA8MUZ8 300 aaPredicted RBP1.92□□□□□ -2.1
CDKL5-208ENST00000624953 F5H768 121 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 GOSR2O14653 212 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 RBFOX2O43251 390 aaKnown RBP eCLIP1.92□□□□□ -2.1
CDKL5-208ENST00000624953 ZNF861PO60384 105 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 TNFAIP8O95379 198 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 HPRT1P00492 218 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 HRASP01112 189 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 HSMCR30P0CW71 290 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 TRAPPC2P0DI81 140 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 TRAPPC2BP0DI82 140 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 DEFB130BP0DP73 79 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 DEFB130AP0DP74 79 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 PRB4P10163 310 aaPredicted RBP1.92□□□□□ -2.1
CDKL5-208ENST00000624953 CD36P16671 472 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 FGF9P31371 208 aaPredicted RBP1.92□□□□□ -2.1
CDKL5-208ENST00000624953 S100A5P33763 92 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 LEPP41159 167 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 ASIPP42127 132 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 WNT4P56705 351 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 TAS2R31P59538 309 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 DAD1P61803 113 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 RPS25P62851 125 aaKnown RBP1.92□□□□□ -2.1
CDKL5-208ENST00000624953 PAFAH1B2P68402 229 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 ST3GAL4Q11206 333 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 USF2Q15853 346 aaPredicted RBP1.92□□□□□ -2.1
CDKL5-208ENST00000624953 SPINK9Q5DT21 86 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 OGFRL1Q5TC84 451 aaPredicted RBP1.92□□□□□ -2.1
CDKL5-208ENST00000624953 TMPRSS11AQ6ZMR5 421 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 DHRSXQ8N5I4 330 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 C15orf54Q8N8G6 183 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 HSD17B11Q8NBQ5 300 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 OR1L8Q8NGR8 309 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 OR10R2Q8NGX6 335 aa1.92□□□□□ -2.1
CDKL5-208ENST00000624953 OR1P1Q8NH06 330 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms