RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 C16orf92Q96LL3 132 aa12.02□□□□□ -0.48
CBWD3-216ENST00000621396 SDF2L1Q9HCN8 221 aa12.02□□□□□ -0.48
CBWD3-216ENST00000621396 TSPAN4O14817 238 aa12.02□□□□□ -0.49
CBWD3-216ENST00000621396 FHL3Q13643 280 aa12.02□□□□□ -0.49
CBWD3-216ENST00000621396 PDE6HQ13956 83 aa12.02□□□□□ -0.49
CBWD3-216ENST00000621396 CENPWQ5EE01 88 aa12.02□□□□□ -0.49
CBWD3-216ENST00000621396 OCC1Q8TAD7 63 aa12.02□□□□□ -0.49
CBWD3-216ENST00000621396 TVP23CQ96ET8 276 aa12.02□□□□□ -0.49
CBWD3-216ENST00000621396 RPS10P5Q9NQ39 176 aa12.02□□□□□ -0.49
CBWD3-216ENST00000621396 RNF24Q9Y225 148 aa12.02□□□□□ -0.49
CBWD3-216ENST00000621396 RPL23P62829 140 aaKnown RBP12.01□□□□□ -0.49
CBWD3-216ENST00000621396 OR5I1Q13606 314 aa12.01□□□□□ -0.49
CBWD3-216ENST00000621396 C20orf173Q96LM9 149 aa12.01□□□□□ -0.49
CBWD3-216ENST00000621396 GPR82Q96P67 336 aa12.01□□□□□ -0.49
CBWD3-216ENST00000621396 ATG101Q9BSB4 218 aa12.01□□□□□ -0.49
CBWD3-216ENST00000621396 SNAPINO95295 136 aa12.01□□□□□ -0.49
CBWD3-216ENST00000621396 BTN1A1Q13410 526 aa12.01□□□□□ -0.49
CBWD3-216ENST00000621396 FAM24BQ8N5W8 94 aa12.01□□□□□ -0.49
CBWD3-216ENST00000621396 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.01□□□□□ -0.49
CBWD3-216ENST00000621396 NAT8Q9UHE5 227 aa12.01□□□□□ -0.49
CBWD3-216ENST00000621396 A0A087X0K7 114 aa12□□□□□ -0.49
CBWD3-216ENST00000621396 C7orf77A4D0Y5 90 aa12□□□□□ -0.49
CBWD3-216ENST00000621396 K7EN84 100 aa12□□□□□ -0.49
CBWD3-216ENST00000621396 PSG9Q00887 426 aa12□□□□□ -0.49
CBWD3-216ENST00000621396 LCN12Q6JVE5 192 aa12□□□□□ -0.49
CBWD3-216ENST00000621396 LINC01551Q86U37 167 aa12□□□□□ -0.49
CBWD3-216ENST00000621396 CBLN2Q8IUK8 224 aa12□□□□□ -0.49
CBWD3-216ENST00000621396 NRN1Q9NPD7 142 aa12□□□□□ -0.49
CBWD3-216ENST00000621396 DIRC3C9JPN6 131 aa12□□□□□ -0.49
CBWD3-216ENST00000621396 GNG4P50150 75 aa12□□□□□ -0.49
CBWD3-216ENST00000621396 FOXL1Q12952 345 aa12□□□□□ -0.49
CBWD3-216ENST00000621396 SPATA3Q8NHX4 192 aa12□□□□□ -0.49
CBWD3-216ENST00000621396 HIST1H2BAQ96A08 127 aa12□□□□□ -0.49
CBWD3-216ENST00000621396 CSN3P07498 182 aa11.99□□□□□ -0.49
CBWD3-216ENST00000621396 CNN1P51911 297 aaKnown RBP11.99□□□□□ -0.49
CBWD3-216ENST00000621396 ERCC8Q13216 396 aa11.99□□□□□ -0.49
CBWD3-216ENST00000621396 FAM74A3Q4VXF1 159 aa11.99□□□□□ -0.49
CBWD3-216ENST00000621396 PRNTQ86SH4 94 aa11.99□□□□□ -0.49
CBWD3-216ENST00000621396 LYPD1Q8N2G4 141 aa11.99□□□□□ -0.49
CBWD3-216ENST00000621396 VGLL1Q99990 258 aa11.99□□□□□ -0.49
CBWD3-216ENST00000621396 MS4A6AQ9H2W1 248 aa11.99□□□□□ -0.49
CBWD3-216ENST00000621396 F6UB75 175 aa11.99□□□□□ -0.49
CBWD3-216ENST00000621396 IGLV2-11P01706 119 aa11.99□□□□□ -0.49
CBWD3-216ENST00000621396 UBE2G1P62253 170 aa11.99□□□□□ -0.49
CBWD3-216ENST00000621396 Q8TAT8 98 aa11.99□□□□□ -0.49
CBWD3-216ENST00000621396 MGST1P10620 155 aaKnown RBP11.98□□□□□ -0.49
CBWD3-216ENST00000621396 ISOC2Q96AB3 205 aa11.98□□□□□ -0.49
CBWD3-216ENST00000621396 IGF2BP2-AS1Q96M15 143 aa11.98□□□□□ -0.49
CBWD3-216ENST00000621396 PEMTQ9UBM1 199 aa11.98□□□□□ -0.49
CBWD3-216ENST00000621396 SOCS3O14543 225 aa11.98□□□□□ -0.49
CBWD3-216ENST00000621396 IGLV2-8P01709 118 aa11.98□□□□□ -0.49
CBWD3-216ENST00000621396 DCANP1Q8TF63 244 aa11.98□□□□□ -0.49
CBWD3-216ENST00000621396 OVOL1O14753 267 aa11.97□□□□□ -0.49
CBWD3-216ENST00000621396 CSN1S1P47710 185 aa11.97□□□□□ -0.49
CBWD3-216ENST00000621396 PRR27Q6MZM9 219 aa11.97□□□□□ -0.49
CBWD3-216ENST00000621396 BAGE2Q86Y30 109 aa11.97□□□□□ -0.49
CBWD3-216ENST00000621396 TMEM61Q8N0U2 210 aa11.97□□□□□ -0.49
CBWD3-216ENST00000621396 IZUMO1RA6ND01 250 aa11.97□□□□□ -0.49
CBWD3-216ENST00000621396 ZNF688P0C7X2 276 aa11.97□□□□□ -0.49
CBWD3-216ENST00000621396 RNF212Q495C1 297 aa11.97□□□□□ -0.49
CBWD3-216ENST00000621396 SLC50A1Q9BRV3 221 aa11.97□□□□□ -0.49
CBWD3-216ENST00000621396 A0A1B0GUS0 222 aa11.96□□□□□ -0.49
CBWD3-216ENST00000621396 M0QZ24 198 aa11.96□□□□□ -0.49
CBWD3-216ENST00000621396 DNASE2O00115 360 aaPredicted RBP11.96□□□□□ -0.49
CBWD3-216ENST00000621396 TMEM183BQ1AE95 376 aa11.96□□□□□ -0.49
CBWD3-216ENST00000621396 CD300EQ496F6 205 aaPredicted RBP11.96□□□□□ -0.49
CBWD3-216ENST00000621396 NDUFA11Q86Y39 141 aa11.96□□□□□ -0.49
CBWD3-216ENST00000621396 RNASE7Q9H1E1 156 aaKnown RBP11.96□□□□□ -0.49
CBWD3-216ENST00000621396 ZNF253O75346 499 aa11.96□□□□□ -0.5
CBWD3-216ENST00000621396 ZNF738Q8NE65 137 aa11.96□□□□□ -0.5
CBWD3-216ENST00000621396 DYNLRB2Q8TF09 96 aa11.96□□□□□ -0.5
CBWD3-216ENST00000621396 URGCP-MRPS24S4R325 110 aa11.96□□□□□ -0.5
CBWD3-216ENST00000621396 PF4P02776 101 aa11.95□□□□□ -0.5
CBWD3-216ENST00000621396 KLF12Q9Y4X4 402 aa11.95□□□□□ -0.5
CBWD3-216ENST00000621396 PKD1L1Q8TDX9 2849 aa11.95□□□□□ -0.5
CBWD3-216ENST00000621396 SAP30O75446 220 aa11.95□□□□□ -0.5
CBWD3-216ENST00000621396 CD33P20138 364 aa11.95□□□□□ -0.5
CBWD3-216ENST00000621396 PSG3Q16557 428 aa11.95□□□□□ -0.5
CBWD3-216ENST00000621396 C8orf49Q96NF6 230 aa11.95□□□□□ -0.5
CBWD3-216ENST00000621396 CITED1Q99966 193 aa11.95□□□□□ -0.5
CBWD3-216ENST00000621396 GPR61Q9BZJ8 451 aa11.95□□□□□ -0.5
CBWD3-216ENST00000621396 C9JCJ5 164 aa11.94□□□□□ -0.5
CBWD3-216ENST00000621396 FLI1Q01543 452 aaPredicted RBP11.94□□□□□ -0.5
CBWD3-216ENST00000621396 DEFB114Q30KQ6 69 aa11.94□□□□□ -0.5
CBWD3-216ENST00000621396 LINC00322Q6ZN03 302 aaPredicted RBP11.94□□□□□ -0.5
CBWD3-216ENST00000621396 RBPMS2Q6ZRY4 209 aaKnown RBP11.94□□□□□ -0.5
CBWD3-216ENST00000621396 PSG8Q9UQ74 426 aa11.94□□□□□ -0.5
CBWD3-216ENST00000621396 NDUFS6O75380 124 aaKnown RBP11.94□□□□□ -0.5
CBWD3-216ENST00000621396 PNRC1Q12796 327 aaPredicted RBP11.94□□□□□ -0.5
CBWD3-216ENST00000621396 PSMG4Q5JS54 123 aa11.94□□□□□ -0.5
CBWD3-216ENST00000621396 GDF5OSQ5U4N7 250 aa11.94□□□□□ -0.5
CBWD3-216ENST00000621396 Q86TA4 180 aa11.94□□□□□ -0.5
CBWD3-216ENST00000621396 FMC1Q96HJ9 113 aa11.94□□□□□ -0.5
CBWD3-216ENST00000621396 AGRNO00468 2067 aa11.93□□□□□ -0.5
CBWD3-216ENST00000621396 LTAP01374 205 aa11.93□□□□□ -0.5
CBWD3-216ENST00000621396 BMI1P35226 326 aa11.93□□□□□ -0.5
CBWD3-216ENST00000621396 TAS2R60P59551 318 aa11.93□□□□□ -0.5
CBWD3-216ENST00000621396 ZNF124Q15973 351 aa11.93□□□□□ -0.5
CBWD3-216ENST00000621396 TCEAL7Q9BRU2 100 aa11.93□□□□□ -0.5
CBWD3-216ENST00000621396 RHEBQ15382 184 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms