RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 RBPMS2Q6ZRY4 209 aaKnown RBP10.76□□□□□ -0.69
CBWD1-226ENST00000618061 S100A7AQ86SG5 101 aa10.76□□□□□ -0.69
CBWD1-226ENST00000618061 HIF1ANQ9NWT6 349 aa10.76□□□□□ -0.69
CBWD1-226ENST00000618061 POLQO75417 2590 aa10.76□□□□□ -0.69
CBWD1-226ENST00000618061 KRTDAPP60985 99 aa10.76□□□□□ -0.69
CBWD1-226ENST00000618061 DEFA6Q01524 100 aa10.76□□□□□ -0.69
CBWD1-226ENST00000618061 CT83Q5H943 113 aa10.76□□□□□ -0.69
CBWD1-226ENST00000618061 LCNL1Q6ZST4 164 aa10.76□□□□□ -0.69
CBWD1-226ENST00000618061 ALKBH7Q9BT30 221 aaPredicted RBP10.76□□□□□ -0.69
CBWD1-226ENST00000618061 ZFP30Q9Y2G7 519 aa10.76□□□□□ -0.69
CBWD1-226ENST00000618061 MUC21A0A0G2JKD1 596 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 MUC21A0A140T8X8 626 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 NDUFS8O00217 210 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 SCGB2A1O75556 95 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 CSN1S1P47710 185 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 BLCAPP62952 87 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 PSG9Q00887 426 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 MUC21Q5SSG8 566 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 ATP5L2Q7Z4Y8 100 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 EEF1AKMT3Q96AZ1 226 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 C14orf144Q96I85 54 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 NRN1Q9NPD7 142 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 TRBV6-1A0A0K0K1D8 114 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 PRAC2D3DTV9 90 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 BUB3O43684 328 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 TRBV12-3P01733 135 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 ARMS2P0C7Q2 107 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 RELQ04864 619 aaPredicted RBP10.75□□□□□ -0.69
CBWD1-226ENST00000618061 ERCC8Q13216 396 aa10.75□□□□□ -0.69
CBWD1-226ENST00000618061 A8MWP6 167 aa10.74□□□□□ -0.69
CBWD1-226ENST00000618061 ZNF324O75467 553 aaPredicted RBP10.74□□□□□ -0.69
CBWD1-226ENST00000618061 GOSR1O95249 250 aa10.74□□□□□ -0.69
CBWD1-226ENST00000618061 TRGV3P03979 118 aa10.74□□□□□ -0.69
CBWD1-226ENST00000618061 ATP5G2Q06055 141 aa10.74□□□□□ -0.69
CBWD1-226ENST00000618061 RNASEKQ6P5S7 137 aaKnown RBP10.74□□□□□ -0.69
CBWD1-226ENST00000618061 C16orf54Q6UWD8 224 aa10.74□□□□□ -0.69
CBWD1-226ENST00000618061 MEGF9Q9H1U4 602 aa10.74□□□□□ -0.69
CBWD1-226ENST00000618061 ZNF80P51504 273 aaPredicted RBP10.73□□□□□ -0.69
CBWD1-226ENST00000618061 SRSF1Q07955 248 aaKnown RBP eCLIP10.73□□□□□ -0.69
CBWD1-226ENST00000618061 PMCHL1Q16048 86 aa10.73□□□□□ -0.69
CBWD1-226ENST00000618061 GFRA4Q9GZZ7 299 aa10.73□□□□□ -0.69
CBWD1-226ENST00000618061 SELENOKQ9Y6D0 94 aa10.73□□□□□ -0.69
CBWD1-226ENST00000618061 FAM208BQ5VWN6 2430 aa10.73□□□□□ -0.69
CBWD1-226ENST00000618061 SH2D1AO60880 128 aa10.73□□□□□ -0.69
CBWD1-226ENST00000618061 IGHV3-11P01762 117 aa10.73□□□□□ -0.69
CBWD1-226ENST00000618061 LCN12Q6JVE5 192 aa10.73□□□□□ -0.69
CBWD1-226ENST00000618061 NIT1Q86X76 327 aa10.73□□□□□ -0.69
CBWD1-226ENST00000618061 OR4B1Q8NGF8 309 aa10.73□□□□□ -0.69
CBWD1-226ENST00000618061 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.73□□□□□ -0.69
CBWD1-226ENST00000618061 NBPF19A0A087WUL8 3843 aa10.73□□□□□ -0.69
CBWD1-226ENST00000618061 ZNF469Q96JG9 3925 aaPredicted RBP10.72□□□□□ -0.69
CBWD1-226ENST00000618061 C19orf54Q5BKX5 351 aa10.72□□□□□ -0.69
CBWD1-226ENST00000618061 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.72□□□□□ -0.69
CBWD1-226ENST00000618061 URB1-AS1Q96HZ7 61 aa10.72□□□□□ -0.69
CBWD1-226ENST00000618061 KLK15Q9H2R5 256 aa10.72□□□□□ -0.69
CBWD1-226ENST00000618061 ANKRD17O75179 2603 aaKnown RBP10.72□□□□□ -0.69
CBWD1-226ENST00000618061 TRBV7-1A0A0A6YYK4 115 aa10.72□□□□□ -0.69
CBWD1-226ENST00000618061 CT45A10P0DMU9 189 aa10.72□□□□□ -0.69
CBWD1-226ENST00000618061 ZNF138P52744 262 aa10.72□□□□□ -0.69
CBWD1-226ENST00000618061 KLK9Q2XQG4 91 aa10.72□□□□□ -0.69
CBWD1-226ENST00000618061 PRR25Q96S07 402 aa10.72□□□□□ -0.69
CBWD1-226ENST00000618061 KLK9Q9UKQ9 250 aa10.72□□□□□ -0.69
CBWD1-226ENST00000618061 CSPG4Q6UVK1 2322 aa10.71□□□□□ -0.69
CBWD1-226ENST00000618061 Q8N976 141 aa10.71□□□□□ -0.69
CBWD1-226ENST00000618061 PAM16Q9Y3D7 125 aa10.71□□□□□ -0.69
CBWD1-226ENST00000618061 A6NDX4 124 aa10.7□□□□□ -0.7
CBWD1-226ENST00000618061 HSBP1O75506 76 aa10.7□□□□□ -0.7
CBWD1-226ENST00000618061 KLF5Q13887 457 aaPredicted RBP10.7□□□□□ -0.7
CBWD1-226ENST00000618061 TMEM95Q3KNT9 176 aa10.7□□□□□ -0.7
CBWD1-226ENST00000618061 UNQ9165/PRO28630Q6UXU0 137 aa10.7□□□□□ -0.7
CBWD1-226ENST00000618061 SVIPQ8NHG7 77 aa10.7□□□□□ -0.7
CBWD1-226ENST00000618061 UBR5O95071 2799 aaPredicted RBP10.7□□□□□ -0.7
CBWD1-226ENST00000618061 A0A1B0GUT8 65 aa10.7□□□□□ -0.7
CBWD1-226ENST00000618061 B4DSR2 109 aa10.7□□□□□ -0.7
CBWD1-226ENST00000618061 HAX1O00165 279 aa10.7□□□□□ -0.7
CBWD1-226ENST00000618061 ZNF843Q8N446 348 aa10.7□□□□□ -0.7
CBWD1-226ENST00000618061 LOC102724200A0A096LPH7 203 aaPredicted RBP10.69□□□□□ -0.7
CBWD1-226ENST00000618061 TMEM189A5PLL7 270 aa10.69□□□□□ -0.7
CBWD1-226ENST00000618061 FAM231BA6NCW3 169 aa10.69□□□□□ -0.7
CBWD1-226ENST00000618061 C3orf79P0CE67 100 aa10.69□□□□□ -0.7
CBWD1-226ENST00000618061 ARL3P36405 182 aa10.69□□□□□ -0.7
CBWD1-226ENST00000618061 KRTAP10-9P60411 292 aa10.69□□□□□ -0.7
CBWD1-226ENST00000618061 FAM162BQ5T6X4 162 aa10.69□□□□□ -0.7
CBWD1-226ENST00000618061 LYZL1Q6UWQ5 148 aa10.69□□□□□ -0.7
CBWD1-226ENST00000618061 METTL26Q96S19 204 aa10.69□□□□□ -0.7
CBWD1-226ENST00000618061 LRRK2Q5S007 2527 aa10.69□□□□□ -0.7
CBWD1-226ENST00000618061 CHD6Q8TD26 2715 aa10.69□□□□□ -0.7
CBWD1-226ENST00000618061 TMEM213A2RRL7 107 aa10.69□□□□□ -0.7
CBWD1-226ENST00000618061 M0R2Z0 102 aa10.69□□□□□ -0.7
CBWD1-226ENST00000618061 PF4V1P10720 104 aa10.69□□□□□ -0.7
CBWD1-226ENST00000618061 C1orf194Q5T5A4 169 aa10.69□□□□□ -0.7
CBWD1-226ENST00000618061 REC114Q7Z4M0 266 aa10.69□□□□□ -0.7
CBWD1-226ENST00000618061 TRAV8-2A0A0B4J237 113 aa10.68□□□□□ -0.7
CBWD1-226ENST00000618061 CSN3P07498 182 aa10.68□□□□□ -0.7
CBWD1-226ENST00000618061 PPIFP30405 207 aaKnown RBP10.68□□□□□ -0.7
CBWD1-226ENST00000618061 IL17RELQ6ZVW7 336 aa10.68□□□□□ -0.7
CBWD1-226ENST00000618061 ATOH7Q8N100 152 aa10.68□□□□□ -0.7
CBWD1-226ENST00000618061 CLEC5AQ9NY25 188 aa10.68□□□□□ -0.7
CBWD1-226ENST00000618061 FAM223BA6NKX1 122 aa10.67□□□□□ -0.7
CBWD1-226ENST00000618061 SMAD7O15105 426 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms