RNA–Protein interactions for RNA: ENST00000580048.1

LINC00909-202, long intergenic non-protein coding RNA 909, humanhuman

TSL 1 (best) BASIC

Gene LINC00909, Length 3,463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00909-202ENST00000580048 C8orf46Q8TAG6 207 aa8.13□□□□□ -1.11
LINC00909-202ENST00000580048 A0A1W2PPI3 338 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 OR11H12B2RN74 326 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 TMEM164Q5U3C3 297 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 Q6AWC8 147 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 SMRP1Q8NCR6 262 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 OR11H1Q8NG94 326 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 OR11H2Q8NH07 326 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 MRPL35Q9NZE8 188 aaKnown RBP8.12□□□□□ -1.11
LINC00909-202ENST00000580048 DIAPH2-AS1Q14236 149 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 OR10X1Q8NGY0 326 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 SAP25Q8TEE9 199 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 TMEM158Q8WZ71 300 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 RPEQ96AT9 228 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 MSRB1Q9NZV6 116 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 MRPS17Q9Y2R5 130 aaKnown RBP8.12□□□□□ -1.11
LINC00909-202ENST00000580048 PLCE1Q9P212 2302 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 CGB1A6NKQ9 187 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 NCBP2LA6PVI3 153 aaKnown RBP8.12□□□□□ -1.11
LINC00909-202ENST00000580048 HOXA3O43365 443 aaPredicted RBP8.12□□□□□ -1.11
LINC00909-202ENST00000580048 GATA1P15976 413 aaPredicted RBP8.12□□□□□ -1.11
LINC00909-202ENST00000580048 SMIM20Q8N5G0 67 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 TEX29Q8N6K0 151 aa8.12□□□□□ -1.11
LINC00909-202ENST00000580048 SLC25A39Q9BZJ4 359 aaPredicted RBP8.12□□□□□ -1.11
LINC00909-202ENST00000580048 MZT1Q08AG7 82 aa8.11□□□□□ -1.11
LINC00909-202ENST00000580048 ZFAND6Q6FIF0 208 aa8.11□□□□□ -1.11
LINC00909-202ENST00000580048 TRBV20-1A0A075B6N2 111 aa8.11□□□□□ -1.11
LINC00909-202ENST00000580048 CGB3P0DN86 165 aa8.11□□□□□ -1.11
LINC00909-202ENST00000580048 CGB7P0DN87 165 aa8.11□□□□□ -1.11
LINC00909-202ENST00000580048 DLX4Q92988 240 aaPredicted RBP8.11□□□□□ -1.11
LINC00909-202ENST00000580048 TMEM133Q9H2Q1 129 aa8.11□□□□□ -1.11
LINC00909-202ENST00000580048 LINC01548A6NM66 108 aa8.1□□□□□ -1.11
LINC00909-202ENST00000580048 ZNF493Q6ZR52 646 aa8.1□□□□□ -1.11
LINC00909-202ENST00000580048 DSCAML1Q8TD84 2053 aa8.1□□□□□ -1.11
LINC00909-202ENST00000580048 DCHS1Q96JQ0 3298 aa8.1□□□□□ -1.11
LINC00909-202ENST00000580048 SH2D1AO60880 128 aa8.1□□□□□ -1.11
LINC00909-202ENST00000580048 CCL3L1P16619 93 aa8.1□□□□□ -1.11
LINC00909-202ENST00000580048 OR4C13Q8NGP0 309 aa8.1□□□□□ -1.11
LINC00909-202ENST00000580048 TRGV9Q99603 122 aa8.1□□□□□ -1.11
LINC00909-202ENST00000580048 TRGV5A0A0B4J1U4 118 aa8.1□□□□□ -1.11
LINC00909-202ENST00000580048 LINC01549A6NIU2 74 aa8.1□□□□□ -1.11
LINC00909-202ENST00000580048 SMCPP49901 116 aaPredicted RBP8.1□□□□□ -1.11
LINC00909-202ENST00000580048 ZFP2Q6ZN57 461 aa8.1□□□□□ -1.11
LINC00909-202ENST00000580048 KIR2DL4Q99706 377 aa8.1□□□□□ -1.11
LINC00909-202ENST00000580048 K7ESF4 209 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 ORM1P02763 201 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 KLK15Q9H2R5 256 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 SPRR3Q9UBC9 169 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 U3KQK5 164 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 Q8TAT8 98 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 TMEM167AQ8TBQ9 72 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 RASL11BQ9BPW5 248 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 PAX8Q06710 450 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 SRSF9Q13242 221 aaKnown RBP eCLIP8.09□□□□□ -1.11
LINC00909-202ENST00000580048 VMA21Q3ZAQ7 101 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 CFAP126Q5VTH2 177 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 C6orf15Q6UXA7 325 aaPredicted RBP8.09□□□□□ -1.11
LINC00909-202ENST00000580048 SCGB1D4Q6XE38 83 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 TMEM75Q8N9X5 138 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 MYOZ3Q8TDC0 251 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 RITA1Q96K30 269 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 NGBQ9NPG2 151 aa8.09□□□□□ -1.11
LINC00909-202ENST00000580048 WDFY4Q6ZS81 3184 aa8.08□□□□□ -1.12
LINC00909-202ENST00000580048 TRBV7-9A0A0J9YWB2 115 aa8.08□□□□□ -1.12
LINC00909-202ENST00000580048 TNFRSF6BO95407 300 aa8.08□□□□□ -1.12
LINC00909-202ENST00000580048 MSMPQ1L6U9 139 aa8.08□□□□□ -1.12
LINC00909-202ENST00000580048 S4R3C0 116 aa8.08□□□□□ -1.12
LINC00909-202ENST00000580048 MED13Q9UHV7 2174 aa8.08□□□□□ -1.12
LINC00909-202ENST00000580048 ACACAQ13085 2346 aa8.08□□□□□ -1.12
LINC00909-202ENST00000580048 TRBV19A0A075B6N1 114 aa8.08□□□□□ -1.12
LINC00909-202ENST00000580048 IGKV2-40A0A087WW87 121 aaPredicted RBP8.08□□□□□ -1.12
LINC00909-202ENST00000580048 ATP5LO75964 103 aa8.08□□□□□ -1.12
LINC00909-202ENST00000580048 IGKV2D-40P01614 121 aaPredicted RBP8.08□□□□□ -1.12
LINC00909-202ENST00000580048 PRTN3P24158 256 aa8.08□□□□□ -1.12
LINC00909-202ENST00000580048 GATD1Q8NB37 220 aa8.08□□□□□ -1.12
LINC00909-202ENST00000580048 SCNM1Q9BWG6 230 aa8.08□□□□□ -1.12
LINC00909-202ENST00000580048 SRSF1Q07955 248 aaKnown RBP eCLIP8.08□□□□□ -1.12
LINC00909-202ENST00000580048 MORN3Q6PF18 240 aaPredicted RBP8.08□□□□□ -1.12
LINC00909-202ENST00000580048 PPDPFLQ8WWR9 84 aa8.08□□□□□ -1.12
LINC00909-202ENST00000580048 DSCAMO60469 2012 aa8.07□□□□□ -1.12
LINC00909-202ENST00000580048 MUC6Q6W4X9 2439 aa8.07□□□□□ -1.12
LINC00909-202ENST00000580048 SCGB2A1O75556 95 aa8.07□□□□□ -1.12
LINC00909-202ENST00000580048 IGKV3-15P01624 115 aa8.07□□□□□ -1.12
LINC00909-202ENST00000580048 SCGB1C2P0DMR2 95 aa8.07□□□□□ -1.12
LINC00909-202ENST00000580048 EFNA4P52798 201 aa8.07□□□□□ -1.12
LINC00909-202ENST00000580048 PRB3Q04118 309 aaPredicted RBP8.07□□□□□ -1.12
LINC00909-202ENST00000580048 SRSF6Q13247 344 aaKnown RBP8.07□□□□□ -1.12
LINC00909-202ENST00000580048 PSMG4Q5JS54 123 aa8.07□□□□□ -1.12
LINC00909-202ENST00000580048 HLA-DRB4P13762 266 aa8.07□□□□□ -1.12
LINC00909-202ENST00000580048 RPL27AP46776 148 aaKnown RBP8.07□□□□□ -1.12
LINC00909-202ENST00000580048 Q6ZT83 130 aa8.07□□□□□ -1.12
LINC00909-202ENST00000580048 AAMDCQ9H7C9 122 aa8.07□□□□□ -1.12
LINC00909-202ENST00000580048 ZMAT4Q9H898 229 aa8.07□□□□□ -1.12
LINC00909-202ENST00000580048 HLA-DRB4X5D2U9 266 aa8.07□□□□□ -1.12
LINC00909-202ENST00000580048 ZGRF1Q86YA3 2104 aa8.07□□□□□ -1.12
LINC00909-202ENST00000580048 EGR2P11161 476 aaPredicted RBP8.06□□□□□ -1.12
LINC00909-202ENST00000580048 TAL2Q16559 108 aa8.06□□□□□ -1.12
LINC00909-202ENST00000580048 PIFOQ8TCI5 191 aa8.06□□□□□ -1.12
LINC00909-202ENST00000580048 NXT2Q9NPJ8 142 aaKnown RBP8.06□□□□□ -1.12
LINC00909-202ENST00000580048 IGHV1-18A0A0C4DH31 117 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms