RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 RNF114Q9Y508 228 aa12.61□□□□□ -0.39
POLR2A-201ENST00000572844 HSBP1O75506 76 aa12.6□□□□□ -0.39
POLR2A-201ENST00000572844 DSCR9P59020 149 aa12.6□□□□□ -0.39
POLR2A-201ENST00000572844 KRTDAPP60985 99 aa12.6□□□□□ -0.39
POLR2A-201ENST00000572844 CHCHD1Q96BP2 118 aaKnown RBP12.6□□□□□ -0.39
POLR2A-201ENST00000572844 SLC50A1Q9BRV3 221 aa12.6□□□□□ -0.39
POLR2A-201ENST00000572844 U3KQE9 123 aa12.6□□□□□ -0.39
POLR2A-201ENST00000572844 IGHV4-30-2A0A087WSY4 118 aa12.6□□□□□ -0.39
POLR2A-201ENST00000572844 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.6□□□□□ -0.39
POLR2A-201ENST00000572844 RBAKDNA6NC62 111 aa12.6□□□□□ -0.39
POLR2A-201ENST00000572844 IGF1P05019 195 aa12.6□□□□□ -0.39
POLR2A-201ENST00000572844 SRSF2Q01130 221 aaKnown RBP12.6□□□□□ -0.39
POLR2A-201ENST00000572844 TMEM219Q86XT9 240 aa12.6□□□□□ -0.39
POLR2A-201ENST00000572844 BORCS7Q96B45 105 aa12.6□□□□□ -0.39
POLR2A-201ENST00000572844 AKAP6Q13023 2319 aa12.6□□□□□ -0.39
POLR2A-201ENST00000572844 IGKV2-40A0A087WW87 121 aaPredicted RBP12.59□□□□□ -0.39
POLR2A-201ENST00000572844 H3BUA1 57 aa12.59□□□□□ -0.39
POLR2A-201ENST00000572844 IGKV2D-40P01614 121 aaPredicted RBP12.59□□□□□ -0.39
POLR2A-201ENST00000572844 MSMBP08118 114 aa12.59□□□□□ -0.39
POLR2A-201ENST00000572844 RAB4AP20338 218 aa12.59□□□□□ -0.39
POLR2A-201ENST00000572844 RPS20P60866 119 aaKnown RBP12.59□□□□□ -0.39
POLR2A-201ENST00000572844 IGHV3OR16-10A0A075B7F0 116 aa12.58□□□□□ -0.39
POLR2A-201ENST00000572844 TMEM189A5PLL7 270 aa12.58□□□□□ -0.39
POLR2A-201ENST00000572844 SH2D1AO60880 128 aa12.58□□□□□ -0.39
POLR2A-201ENST00000572844 C3orf79P0CE67 100 aa12.58□□□□□ -0.39
POLR2A-201ENST00000572844 BMI1P35226 326 aa12.58□□□□□ -0.39
POLR2A-201ENST00000572844 LCN12Q6JVE5 192 aa12.58□□□□□ -0.39
POLR2A-201ENST00000572844 BRD3OSQ6XYD6 125 aa12.58□□□□□ -0.39
POLR2A-201ENST00000572844 FAM19A2Q8N3H0 131 aa12.58□□□□□ -0.39
POLR2A-201ENST00000572844 URB1-AS1Q96HZ7 61 aa12.58□□□□□ -0.39
POLR2A-201ENST00000572844 METTL26Q96S19 204 aa12.58□□□□□ -0.39
POLR2A-201ENST00000572844 ZFYVE26Q68DK2 2539 aa12.58□□□□□ -0.4
POLR2A-201ENST00000572844 IGHV3-35A0A0C4DH35 117 aa12.58□□□□□ -0.4
POLR2A-201ENST00000572844 A6NDX4 124 aa12.58□□□□□ -0.4
POLR2A-201ENST00000572844 M0QZK8 103 aa12.58□□□□□ -0.4
POLR2A-201ENST00000572844 ARMS2P0C7Q2 107 aa12.58□□□□□ -0.4
POLR2A-201ENST00000572844 NTF3P20783 257 aa12.58□□□□□ -0.4
POLR2A-201ENST00000572844 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.58□□□□□ -0.4
POLR2A-201ENST00000572844 ZNF493Q6ZR52 646 aa12.58□□□□□ -0.4
POLR2A-201ENST00000572844 MRPL53Q96EL3 112 aaKnown RBP12.58□□□□□ -0.4
POLR2A-201ENST00000572844 VAMP8Q9BV40 100 aa12.58□□□□□ -0.4
POLR2A-201ENST00000572844 IGHV4-38-2P0DP08 117 aa12.57□□□□□ -0.4
POLR2A-201ENST00000572844 RNASEKQ6P5S7 137 aaKnown RBP12.57□□□□□ -0.4
POLR2A-201ENST00000572844 ASCL2Q99929 193 aa12.57□□□□□ -0.4
POLR2A-201ENST00000572844 M0R2Z0 102 aa12.57□□□□□ -0.4
POLR2A-201ENST00000572844 IGHG2P01859 326 aa12.57□□□□□ -0.4
POLR2A-201ENST00000572844 GATA3P23771 443 aa12.57□□□□□ -0.4
POLR2A-201ENST00000572844 FAM181BA6NEQ2 426 aa12.56□□□□□ -0.4
POLR2A-201ENST00000572844 VGLL1Q99990 258 aa12.56□□□□□ -0.4
POLR2A-201ENST00000572844 C2orf88Q9BSF0 95 aa12.56□□□□□ -0.4
POLR2A-201ENST00000572844 CLEC5AQ9NY25 188 aa12.56□□□□□ -0.4
POLR2A-201ENST00000572844 IGHV3OR16-8A0A075B7F1 116 aa12.55□□□□□ -0.4
POLR2A-201ENST00000572844 B4DSR2 109 aa12.55□□□□□ -0.4
POLR2A-201ENST00000572844 TDRG1Q3Y452 100 aa12.55□□□□□ -0.4
POLR2A-201ENST00000572844 MRPL52Q86TS9 123 aaKnown RBP12.55□□□□□ -0.4
POLR2A-201ENST00000572844 TRGV3P03979 118 aa12.55□□□□□ -0.4
POLR2A-201ENST00000572844 RNF224P0DH78 156 aa12.55□□□□□ -0.4
POLR2A-201ENST00000572844 HLA-DMBP28068 263 aa12.55□□□□□ -0.4
POLR2A-201ENST00000572844 USMG5Q96IX5 58 aa12.55□□□□□ -0.4
POLR2A-201ENST00000572844 MIEN1Q9BRT3 115 aa12.55□□□□□ -0.4
POLR2A-201ENST00000572844 HIF1ANQ9NWT6 349 aa12.55□□□□□ -0.4
POLR2A-201ENST00000572844 DOPEY1Q5JWR5 2465 aa12.54□□□□□ -0.4
POLR2A-201ENST00000572844 PPIFP30405 207 aaKnown RBP12.54□□□□□ -0.4
POLR2A-201ENST00000572844 PMCHL1Q16048 86 aa12.54□□□□□ -0.4
POLR2A-201ENST00000572844 H3BUX3 64 aa12.53□□□□□ -0.4
POLR2A-201ENST00000572844 PRB1P04280 392 aa12.53□□□□□ -0.4
POLR2A-201ENST00000572844 LINC00614P0C842 121 aa12.53□□□□□ -0.4
POLR2A-201ENST00000572844 SLC25A16P16260 332 aa12.53□□□□□ -0.4
POLR2A-201ENST00000572844 CTRLP40313 264 aa12.53□□□□□ -0.4
POLR2A-201ENST00000572844 EPG5Q9HCE0 2579 aa12.53□□□□□ -0.4
POLR2A-201ENST00000572844 C2orf70A6NJV1 201 aa12.53□□□□□ -0.4
POLR2A-201ENST00000572844 BTF3P20290 206 aaKnown RBP12.53□□□□□ -0.4
POLR2A-201ENST00000572844 IGFL4Q6B9Z1 124 aa12.53□□□□□ -0.4
POLR2A-201ENST00000572844 LYZL1Q6UWQ5 148 aa12.53□□□□□ -0.4
POLR2A-201ENST00000572844 BBC3Q96PG8 261 aaPredicted RBP12.53□□□□□ -0.4
POLR2A-201ENST00000572844 ZNF580Q9UK33 172 aa12.53□□□□□ -0.4
POLR2A-201ENST00000572844 PAM16Q9Y3D7 125 aa12.53□□□□□ -0.4
POLR2A-201ENST00000572844 FABP5P3A8MUU1 101 aa12.52□□□□□ -0.4
POLR2A-201ENST00000572844 OR5AL1P0C617 328 aa12.52□□□□□ -0.4
POLR2A-201ENST00000572844 PRB4P10163 310 aaPredicted RBP12.52□□□□□ -0.4
POLR2A-201ENST00000572844 ARL3P36405 182 aa12.52□□□□□ -0.4
POLR2A-201ENST00000572844 ZNF80P51504 273 aaPredicted RBP12.52□□□□□ -0.4
POLR2A-201ENST00000572844 EBLN2Q6P2I7 272 aa12.52□□□□□ -0.4
POLR2A-201ENST00000572844 Q8TAT8 98 aa12.52□□□□□ -0.4
POLR2A-201ENST00000572844 PPP1R14DQ9NXH3 145 aa12.52□□□□□ -0.4
POLR2A-201ENST00000572844 TRAV8-2A0A0B4J237 113 aa12.52□□□□□ -0.41
POLR2A-201ENST00000572844 NDUFA4O00483 81 aa12.52□□□□□ -0.41
POLR2A-201ENST00000572844 IGLC6P0CF74 106 aa12.52□□□□□ -0.41
POLR2A-201ENST00000572844 PRAC2D3DTV9 90 aa12.51□□□□□ -0.41
POLR2A-201ENST00000572844 GLMPQ8WWB7 406 aa12.51□□□□□ -0.41
POLR2A-201ENST00000572844 PSMG3-AS1Q96PY0 264 aa12.51□□□□□ -0.41
POLR2A-201ENST00000572844 U3KQK5 164 aa12.51□□□□□ -0.41
POLR2A-201ENST00000572844 IGHV1-24A0A0C4DH33 117 aa12.5□□□□□ -0.41
POLR2A-201ENST00000572844 CRXO43186 299 aaPredicted RBP12.5□□□□□ -0.41
POLR2A-201ENST00000572844 LY6EQ16553 131 aa12.5□□□□□ -0.41
POLR2A-201ENST00000572844 LINC01559Q495D7 138 aa12.5□□□□□ -0.41
POLR2A-201ENST00000572844 PRR31Q5SQ13 230 aa12.5□□□□□ -0.41
POLR2A-201ENST00000572844 C8orf86Q6ZUL3 223 aa12.5□□□□□ -0.41
POLR2A-201ENST00000572844 LINC00527Q9UJ94 153 aa12.5□□□□□ -0.41
POLR2A-201ENST00000572844 FAM104BQ5XKR9 115 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms