RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 LEPP41159 167 aa13.21□□□□□ -0.29
LITAF-209ENST00000571688 Q5PR19 223 aa13.21□□□□□ -0.29
LITAF-209ENST00000571688 GTSCR1Q86UQ5 136 aa13.21□□□□□ -0.29
LITAF-209ENST00000571688 PRO0461Q9UI25 63 aa13.21□□□□□ -0.29
LITAF-209ENST00000571688 K7EMI3 77 aa13.21□□□□□ -0.3
LITAF-209ENST00000571688 C3orf36Q3SXR2 165 aa13.21□□□□□ -0.3
LITAF-209ENST00000571688 COX8CQ7Z4L0 72 aa13.21□□□□□ -0.3
LITAF-209ENST00000571688 SCGB2A2Q13296 93 aa13.2□□□□□ -0.3
LITAF-209ENST00000571688 TWIST1Q15672 202 aa13.2□□□□□ -0.3
LITAF-209ENST00000571688 TAL2Q16559 108 aa13.2□□□□□ -0.3
LITAF-209ENST00000571688 KLF17Q5JT82 389 aaPredicted RBP13.2□□□□□ -0.3
LITAF-209ENST00000571688 ZC2HC1BQ5TFG8 222 aa13.2□□□□□ -0.3
LITAF-209ENST00000571688 WFDC12Q8WWY7 111 aa13.2□□□□□ -0.3
LITAF-209ENST00000571688 RNF185Q96GF1 192 aa13.2□□□□□ -0.3
LITAF-209ENST00000571688 SIGLEC9Q9Y336 463 aa13.2□□□□□ -0.3
LITAF-209ENST00000571688 CEACAM4O75871 244 aa13.2□□□□□ -0.3
LITAF-209ENST00000571688 C12orf74Q32Q52 190 aa13.2□□□□□ -0.3
LITAF-209ENST00000571688 LINC01559Q495D7 138 aa13.2□□□□□ -0.3
LITAF-209ENST00000571688 ABCA1O95477 2261 aa13.19□□□□□ -0.3
LITAF-209ENST00000571688 DPM2O94777 84 aa13.19□□□□□ -0.3
LITAF-209ENST00000571688 PRSS1P07477 247 aa13.19□□□□□ -0.3
LITAF-209ENST00000571688 IGLC6P0CF74 106 aa13.19□□□□□ -0.3
LITAF-209ENST00000571688 GAGE13Q4V321 117 aa13.19□□□□□ -0.3
LITAF-209ENST00000571688 TDHQ8IZJ6 230 aa13.19□□□□□ -0.3
LITAF-209ENST00000571688 FOXC2Q99958 501 aa13.19□□□□□ -0.3
LITAF-209ENST00000571688 ATP5LO75964 103 aa13.18□□□□□ -0.3
LITAF-209ENST00000571688 WT1P19544 449 aaPredicted RBP13.18□□□□□ -0.3
LITAF-209ENST00000571688 SEM1Q6ZVN7 128 aa13.18□□□□□ -0.3
LITAF-209ENST00000571688 NXT2Q9NPJ8 142 aaKnown RBP13.18□□□□□ -0.3
LITAF-209ENST00000571688 PLCE1Q9P212 2302 aa13.18□□□□□ -0.3
LITAF-209ENST00000571688 EGR2P11161 476 aaPredicted RBP13.18□□□□□ -0.3
LITAF-209ENST00000571688 ZNF491Q8N8L2 437 aa13.18□□□□□ -0.3
LITAF-209ENST00000571688 PRSS47A8MTI9 375 aa13.17□□□□□ -0.3
LITAF-209ENST00000571688 GAS8-AS1O95177 125 aa13.17□□□□□ -0.3
LITAF-209ENST00000571688 INSL3P51460 131 aa13.17□□□□□ -0.3
LITAF-209ENST00000571688 DLX6P56179 175 aa13.17□□□□□ -0.3
LITAF-209ENST00000571688 PDE6HQ13956 83 aa13.17□□□□□ -0.3
LITAF-209ENST00000571688 ZNF474Q6S9Z5 364 aaPredicted RBP13.17□□□□□ -0.3
LITAF-209ENST00000571688 AMTNQ6UX39 209 aa13.17□□□□□ -0.3
LITAF-209ENST00000571688 MRAP2Q96G30 205 aa13.17□□□□□ -0.3
LITAF-209ENST00000571688 TMEM8BA6NDV4 472 aa13.17□□□□□ -0.3
LITAF-209ENST00000571688 CCL8P80075 99 aa13.17□□□□□ -0.3
LITAF-209ENST00000571688 PLGLAQ15195 96 aa13.17□□□□□ -0.3
LITAF-209ENST00000571688 MAPKAPK5-AS1Q8N8E1 139 aa13.17□□□□□ -0.3
LITAF-209ENST00000571688 AAMDCQ9H7C9 122 aa13.17□□□□□ -0.3
LITAF-209ENST00000571688 AGRNO00468 2067 aa13.16□□□□□ -0.3
LITAF-209ENST00000571688 ATP5G2Q06055 141 aa13.16□□□□□ -0.3
LITAF-209ENST00000571688 RRN3P1Q2M238 152 aa13.16□□□□□ -0.3
LITAF-209ENST00000571688 PPP1R27Q86WC6 154 aa13.16□□□□□ -0.3
LITAF-209ENST00000571688 ZNF575Q86XF7 245 aa13.16□□□□□ -0.3
LITAF-209ENST00000571688 RNF125Q96EQ8 232 aa13.16□□□□□ -0.3
LITAF-209ENST00000571688 ZFHX4Q86UP3 3567 aa13.16□□□□□ -0.3
LITAF-209ENST00000571688 TRAV26-1A0A087WT03 109 aa13.16□□□□□ -0.3
LITAF-209ENST00000571688 PRRG2O14669 202 aa13.15□□□□□ -0.3
LITAF-209ENST00000571688 TNFRSF6BO95407 300 aa13.15□□□□□ -0.3
LITAF-209ENST00000571688 TMEM158Q8WZ71 300 aa13.15□□□□□ -0.3
LITAF-209ENST00000571688 MSRB1Q9NZV6 116 aa13.15□□□□□ -0.3
LITAF-209ENST00000571688 SH3BGRL2Q9UJC5 107 aa13.15□□□□□ -0.3
LITAF-209ENST00000571688 CFAP47Q6ZTR5 3102 aa13.15□□□□□ -0.3
LITAF-209ENST00000571688 MBD3L4A6NDZ8 208 aaPredicted RBP13.15□□□□□ -0.3
LITAF-209ENST00000571688 MBD3L3A6NE82 208 aaPredicted RBP13.15□□□□□ -0.3
LITAF-209ENST00000571688 MBD3L5A6NJ08 208 aaPredicted RBP13.15□□□□□ -0.3
LITAF-209ENST00000571688 K7EIM0 57 aa13.15□□□□□ -0.3
LITAF-209ENST00000571688 SRSF6Q13247 344 aaKnown RBP13.15□□□□□ -0.3
LITAF-209ENST00000571688 TTC9CQ8N5M4 171 aa13.15□□□□□ -0.3
LITAF-209ENST00000571688 MBD3L2Q8NHZ7 208 aaPredicted RBP13.15□□□□□ -0.3
LITAF-209ENST00000571688 PSMG3-AS1Q96PY0 264 aa13.15□□□□□ -0.3
LITAF-209ENST00000571688 PRR25Q96S07 402 aa13.15□□□□□ -0.3
LITAF-209ENST00000571688 CNFNQ9BYD5 112 aa13.15□□□□□ -0.3
LITAF-209ENST00000571688 TRAV40A0A0B4J280 105 aa13.14□□□□□ -0.31
LITAF-209ENST00000571688 A0A1B0GWB2 263 aa13.14□□□□□ -0.31
LITAF-209ENST00000571688 IL4P05112 153 aa13.14□□□□□ -0.31
LITAF-209ENST00000571688 ZNF883P0CG24 379 aa13.14□□□□□ -0.31
LITAF-209ENST00000571688 LPAL2Q16609 132 aa13.14□□□□□ -0.31
LITAF-209ENST00000571688 MTURNQ8N3F0 131 aa13.14□□□□□ -0.31
LITAF-209ENST00000571688 IGKV2-40A0A087WW87 121 aaPredicted RBP13.14□□□□□ -0.31
LITAF-209ENST00000571688 IGKV2D-40P01614 121 aaPredicted RBP13.14□□□□□ -0.31
LITAF-209ENST00000571688 ZNF80P51504 273 aaPredicted RBP13.14□□□□□ -0.31
LITAF-209ENST00000571688 LYPD2Q6UXB3 125 aa13.14□□□□□ -0.31
LITAF-209ENST00000571688 TMEM160Q9NX00 188 aa13.14□□□□□ -0.31
LITAF-209ENST00000571688 LAMTOR5O43504 91 aa13.13□□□□□ -0.31
LITAF-209ENST00000571688 NDUFB3O43676 98 aa13.13□□□□□ -0.31
LITAF-209ENST00000571688 IGHV1-8P0DP01 117 aa13.13□□□□□ -0.31
LITAF-209ENST00000571688 CRYBA4P53673 196 aa13.13□□□□□ -0.31
LITAF-209ENST00000571688 MALRD1Q5VYJ5 2156 aa13.13□□□□□ -0.31
LITAF-209ENST00000571688 TRBV7-3A0A075B6L6 115 aa13.13□□□□□ -0.31
LITAF-209ENST00000571688 LOXP28300 417 aaPredicted RBP13.13□□□□□ -0.31
LITAF-209ENST00000571688 SRSF2Q01130 221 aaKnown RBP13.13□□□□□ -0.31
LITAF-209ENST00000571688 TMEM155Q4W5P6 130 aa13.13□□□□□ -0.31
LITAF-209ENST00000571688 MRPL35Q9NZE8 188 aaKnown RBP13.13□□□□□ -0.31
LITAF-209ENST00000571688 IGLV2-18A0A075B6J9 118 aa13.12□□□□□ -0.31
LITAF-209ENST00000571688 TNFRSF13BO14836 293 aaPredicted RBP13.12□□□□□ -0.31
LITAF-209ENST00000571688 C20orf78Q9BR46 151 aa13.12□□□□□ -0.31
LITAF-209ENST00000571688 MRPL16Q9NX20 251 aaKnown RBP13.12□□□□□ -0.31
LITAF-209ENST00000571688 Q8N8P6 123 aa13.12□□□□□ -0.31
LITAF-209ENST00000571688 HIST1H4GQ99525 98 aa13.12□□□□□ -0.31
LITAF-209ENST00000571688 FBXL15Q9H469 300 aa13.12□□□□□ -0.31
LITAF-209ENST00000571688 GEMIN7Q9H840 131 aaKnown RBP13.12□□□□□ -0.31
LITAF-209ENST00000571688 CTSZQ9UBR2 303 aa13.12□□□□□ -0.31
LITAF-209ENST00000571688 SMG1Q96Q15 3661 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms