RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 SNRNP200O75643 2136 aaKnown RBP0.43□□□□□ -2.34
CHD9-204ENST00000561869 N4BP2Q86UW6 1770 aaPredicted RBP0.43□□□□□ -2.34
CHD9-204ENST00000561869 IGLV3-32A0A0A0MS00 114 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 OR2T8A6NH00 312 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 F8W1H4 67 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 LYRM1O43325 122 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 CD2P06729 351 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 BCL2P10415 239 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 LINC00269Q8N2A0 174 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 LRRC18Q8N456 261 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 PLPP5Q8NEB5 264 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 THEM6Q8WUY1 208 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 BORCS5Q969J3 196 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 BORCS8Q96FH0 119 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 ZC2HC1AQ96GY0 325 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 MCEEQ96PE7 176 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 TAF9BQ9HBM6 251 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 MED11Q9P086 117 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 NAT8BQ9UHF3 227 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 LAMTOR2Q9Y2Q5 125 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 TENM3Q9P273 2699 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 MED12Q93074 2177 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 E9PCH4 1651 aa0.43□□□□□ -2.34
CHD9-204ENST00000561869 ZNF469Q96JG9 3925 aaPredicted RBP0.43□□□□□ -2.34
CHD9-204ENST00000561869 TRBV7-6A0A0J9YX20 115 aa0.42□□□□□ -2.34
CHD9-204ENST00000561869 PRORSD1PA6NEY8 169 aa0.42□□□□□ -2.34
CHD9-204ENST00000561869 E7EQ34 232 aa0.42□□□□□ -2.34
CHD9-204ENST00000561869 H3BRM9 83 aa0.42□□□□□ -2.34
CHD9-204ENST00000561869 GABARAPH6UMI1 98 aa0.42□□□□□ -2.34
CHD9-204ENST00000561869 KPNA4O00629 521 aaPredicted RBP0.42□□□□□ -2.34
CHD9-204ENST00000561869 PFDN1O60925 122 aa0.42□□□□□ -2.34
CHD9-204ENST00000561869 FAM107AO95990 144 aa0.42□□□□□ -2.34
CHD9-204ENST00000561869 IGHV3-33P01772 117 aa0.42□□□□□ -2.34
CHD9-204ENST00000561869 EIF3IQ13347 325 aaKnown RBP0.42□□□□□ -2.34
CHD9-204ENST00000561869 HAGHLQ6PII5 290 aaPredicted RBP0.42□□□□□ -2.34
CHD9-204ENST00000561869 TEN1Q86WV5 123 aa0.42□□□□□ -2.34
CHD9-204ENST00000561869 TET1Q8NFU7 2136 aa0.42□□□□□ -2.34
CHD9-204ENST00000561869 DYDC1Q8WWB3 177 aa0.42□□□□□ -2.34
CHD9-204ENST00000561869 RMND5BQ96G75 393 aaPredicted RBP0.42□□□□□ -2.34
CHD9-204ENST00000561869 CCDC32Q9BV29 185 aa0.42□□□□□ -2.34
CHD9-204ENST00000561869 TCEAL2Q9H3H9 227 aaPredicted RBP0.42□□□□□ -2.34
CHD9-204ENST00000561869 MED31Q9Y3C7 131 aa0.42□□□□□ -2.34
CHD9-204ENST00000561869 SIP14410 1827 aa0.42□□□□□ -2.34
CHD9-204ENST00000561869 PHRF1Q9P1Y6 1649 aaKnown RBP0.42□□□□□ -2.34
CHD9-204ENST00000561869 TCOF1Q13428 1488 aaKnown RBP0.41□□□□□ -2.34
CHD9-204ENST00000561869 MGAMO43451 1857 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 CASP8AP2Q9UKL3 1982 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 BCL9O00512 1426 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 ERBINQ96RT1 1412 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 NOTCH1P46531 2555 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 TRBV27A0A0K0K1C4 114 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 C9orf170A2RU37 121 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 C5orf67F2Z3F1 127 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 DNAL4O96015 105 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 IFNA21P01568 189 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 S100A11P31949 105 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 POLR2HP52434 150 aaKnown RBP0.41□□□□□ -2.34
CHD9-204ENST00000561869 EFNA4P52798 201 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 MRPS36P82909 103 aaKnown RBP0.41□□□□□ -2.34
CHD9-204ENST00000561869 MIR22HGQ0VDD5 57 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 CIRBPQ14011 172 aaKnown RBP0.41□□□□□ -2.34
CHD9-204ENST00000561869 FOXI2Q6ZQN5 318 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 CROCCP2Q86T23 111 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 Q8N6K4 173 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 OR4B1Q8NGF8 309 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 SELENOSQ9BQE4 189 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 EFCAB11Q9BUY7 163 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 HSPB8Q9UJY1 196 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 TNFSF18Q9UNG2 199 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 CHD3Q12873 2000 aaKnown RBP0.41□□□□□ -2.34
CHD9-204ENST00000561869 ANKRD31Q8N7Z5 1873 aa0.41□□□□□ -2.34
CHD9-204ENST00000561869 MUC4Q99102 2169 aa0.4□□□□□ -2.34
CHD9-204ENST00000561869 PTPRFP10586 1907 aa0.4□□□□□ -2.34
CHD9-204ENST00000561869 NUP210Q8TEM1 1887 aaPredicted RBP0.4□□□□□ -2.35
CHD9-204ENST00000561869 FBN2P35556 2912 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.4□□□□□ -2.35
CHD9-204ENST00000561869 A0A0J9YY99 117 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 JMJD7-PLA2G4BH0Y9G9 81 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 NCR3O14931 201 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 KLF7O75840 302 aaPredicted RBP0.4□□□□□ -2.35
CHD9-204ENST00000561869 NBEAP1P0C6P0 100 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 FABP2P12104 132 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 FABP4P15090 132 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 SDC2P34741 201 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 TMEM128Q5BJH2 165 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 HRCT1Q6UXD1 115 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 LINC00575Q6W349 94 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 ZCCHC23Q6ZST2 131 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 SMIM15Q7Z3B0 74 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 GKN2Q86XP6 184 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 SBSPONQ8IVN8 264 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 OR9Q1Q8NGQ5 310 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 OR4C12Q96R67 309 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 CST11Q9H112 138 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 TMEM138Q9NPI0 162 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 TPRKBQ9Y3C4 175 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 LAMA4Q16363 1823 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 ARAP1Q96P48 1450 aa0.4□□□□□ -2.35
CHD9-204ENST00000561869 FAM135BQ49AJ0 1406 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 SYNE2Q8WXH0 6885 aaKnown RBP0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms