RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 MUC21Q5SSG8 566 aa8.52□□□□□ -1.05
CARMIL3-202ENST00000559694 ZNF114Q8NC26 417 aa8.52□□□□□ -1.05
CARMIL3-202ENST00000559694 WFDC11Q8NEX6 87 aa8.52□□□□□ -1.05
CARMIL3-202ENST00000559694 SOX21Q9Y651 276 aaPredicted RBP8.52□□□□□ -1.05
CARMIL3-202ENST00000559694 DOPEY1Q5JWR5 2465 aa8.52□□□□□ -1.05
CARMIL3-202ENST00000559694 TRAV8-6A0A0B4J262 113 aa8.51□□□□□ -1.05
CARMIL3-202ENST00000559694 YPEL3P61236 119 aaPredicted RBP8.51□□□□□ -1.05
CARMIL3-202ENST00000559694 MAP1LC3AQ9H492 121 aa8.51□□□□□ -1.05
CARMIL3-202ENST00000559694 FN1P02751 2386 aaKnown RBP8.51□□□□□ -1.05
CARMIL3-202ENST00000559694 KIR2DL5BA0A0G2JN68 375 aa8.51□□□□□ -1.05
CARMIL3-202ENST00000559694 KIR2DL5BA0A0G2JPC4 375 aa8.51□□□□□ -1.05
CARMIL3-202ENST00000559694 C15orf62A8K5M9 175 aa8.51□□□□□ -1.05
CARMIL3-202ENST00000559694 KIR2DL5AQ8N109 375 aa8.51□□□□□ -1.05
CARMIL3-202ENST00000559694 EXPH5Q8NEV8 1989 aa8.51□□□□□ -1.05
CARMIL3-202ENST00000559694 SRRM4A7MD48 611 aaKnown RBP8.51□□□□□ -1.05
CARMIL3-202ENST00000559694 SPANXN1Q5VSR9 72 aa8.51□□□□□ -1.05
CARMIL3-202ENST00000559694 ZNF502Q8TBZ5 544 aa8.51□□□□□ -1.05
CARMIL3-202ENST00000559694 PRELID3AQ96N28 172 aa8.51□□□□□ -1.05
CARMIL3-202ENST00000559694 CST9LQ9H4G1 147 aa8.51□□□□□ -1.05
CARMIL3-202ENST00000559694 ACANP16112 2415 aa8.51□□□□□ -1.05
CARMIL3-202ENST00000559694 SAP30O75446 220 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 RNASE2P10153 161 aaKnown RBP8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 LMO4P61968 165 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 SEC11AP67812 179 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 SMAGPQ0VAQ4 97 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 OCIAD2Q56VL3 154 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 TEX43Q6ZNM6 134 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 OR11H6Q8NGC7 330 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 USMG5Q96IX5 58 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 TRAV5A0A0B4J249 113 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 HAPLN4Q86UW8 402 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 PYGO2Q9BRQ0 406 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 MCRIP2Q9BUT9 160 aaKnown RBP8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 ARHGAP21Q5T5U3 1957 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 A0A1B0GWB2 263 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 IGKV1-39P01597 117 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 IGKV1D-39P04432 117 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 TDRG1Q3Y452 100 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 MRPL27Q9P0M9 148 aaKnown RBP8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 LY96Q9Y6Y9 160 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 MAJINQ3KP22 176 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 Q6ZVH6 145 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 TMEM160Q9NX00 188 aa8.5□□□□□ -1.05
CARMIL3-202ENST00000559694 ARHGAP32A7KAX9 2087 aa8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 PRB4P10163 310 aaPredicted RBP8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 PAX1P15863 534 aa8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 CHCHD1Q96BP2 118 aaKnown RBP8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 EPDR1Q9UM22 224 aa8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 CPAMD8Q8IZJ3 1885 aa8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 TMEM238LA0A1B0GVL6 79 aa8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 A6NJY4 79 aa8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 RPL15P61313 204 aaKnown RBP8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 NDPQ00604 133 aa8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 NUPR1O60356 82 aa8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 HERVK_113P61574 105 aa8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 NUP35Q8NFH5 326 aa8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 GLMPQ8WWB7 406 aa8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 TMEM14BQ9NUH8 114 aa8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 RNF114Q9Y508 228 aa8.49□□□□□ -1.05
CARMIL3-202ENST00000559694 TRBV7-1A0A0A6YYK4 115 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 SYS1-DBNDD2H3BUS1 97 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 NDUFB8O95169 186 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 SYNJ2BPP57105 145 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 RRN3P1Q2M238 152 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 SIGMAR1Q99720 223 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 MS4A6AQ9H2W1 248 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 NHP2Q9NX24 153 aaKnown RBP8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 OVOL3O00110 214 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 VPREB3Q9UKI3 123 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 ZNF292O60281 2723 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 F2Z2F3 143 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 CACNG7P62955 275 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 TTC9CQ8N5M4 171 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 KLK15Q9H2R5 256 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 NDUFA4L2Q9NRX3 87 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 MGPP08493 103 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 BLCAPP62952 87 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 ATP5L2Q7Z4Y8 100 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 OR5A1Q8NGJ0 315 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 C18orf32Q8TCD1 76 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 FMC1Q96HJ9 113 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 LINC00479Q96M42 142 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 Q9H3A6 140 aa8.48□□□□□ -1.05
CARMIL3-202ENST00000559694 ZNF138P52744 262 aa8.47□□□□□ -1.05
CARMIL3-202ENST00000559694 Q8N7P7 452 aa8.47□□□□□ -1.05
CARMIL3-202ENST00000559694 HECTD1Q9ULT8 2610 aa8.47□□□□□ -1.05
CARMIL3-202ENST00000559694 XIRP2A4UGR9 3374 aa8.47□□□□□ -1.05
CARMIL3-202ENST00000559694 ORMDL3Q8N138 153 aa8.47□□□□□ -1.05
CARMIL3-202ENST00000559694 FAM110DQ8TAY7 271 aaPredicted RBP8.47□□□□□ -1.05
CARMIL3-202ENST00000559694 CD5LO43866 347 aa8.47□□□□□ -1.05
CARMIL3-202ENST00000559694 IGLL1P15814 213 aa8.47□□□□□ -1.05
CARMIL3-202ENST00000559694 WT1-ASQ06250 92 aa8.47□□□□□ -1.05
CARMIL3-202ENST00000559694 LOXL1Q08397 574 aaPredicted RBP8.47□□□□□ -1.05
CARMIL3-202ENST00000559694 MTURNQ8N3F0 131 aa8.47□□□□□ -1.05
CARMIL3-202ENST00000559694 PMS2P5A8MQ11 134 aa8.46□□□□□ -1.05
CARMIL3-202ENST00000559694 H7C2G1 150 aa8.46□□□□□ -1.05
CARMIL3-202ENST00000559694 RASL11AQ6T310 242 aa8.46□□□□□ -1.05
CARMIL3-202ENST00000559694 SRSF8Q9BRL6 282 aaKnown RBP8.46□□□□□ -1.05
CARMIL3-202ENST00000559694 SCRT1Q9BWW7 348 aa8.46□□□□□ -1.05
CARMIL3-202ENST00000559694 FAM223BA6NKX1 122 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms