RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 LINC00299Q6ZSB3 139 aa-0.28□□□□□ -2.45
CASC4-210ENST00000559550 ZCCHC23Q6ZST2 131 aa-0.28□□□□□ -2.45
CASC4-210ENST00000559550 UNC79Q9P2D8 2635 aa-0.28□□□□□ -2.45
CASC4-210ENST00000559550 FRMPD1Q5SYB0 1578 aa-0.28□□□□□ -2.45
CASC4-210ENST00000559550 TRGC2P03986 189 aa-0.29□□□□□ -2.46
CASC4-210ENST00000559550 AKIRIN2Q53H80 203 aa-0.29□□□□□ -2.46
CASC4-210ENST00000559550 LYG2Q86SG7 212 aa-0.29□□□□□ -2.46
CASC4-210ENST00000559550 ARMC1Q9NVT9 282 aa-0.29□□□□□ -2.46
CASC4-210ENST00000559550 PTPRDP23468 1912 aa-0.29□□□□□ -2.46
CASC4-210ENST00000559550 TRPM1Q7Z4N2 1603 aa-0.3□□□□□ -2.46
CASC4-210ENST00000559550 CAV3P56539 151 aa-0.3□□□□□ -2.46
CASC4-210ENST00000559550 GNG5P63218 68 aa-0.3□□□□□ -2.46
CASC4-210ENST00000559550 IFT20Q8IY31 132 aa-0.3□□□□□ -2.46
CASC4-210ENST00000559550 C10orf111Q8N326 155 aa-0.3□□□□□ -2.46
CASC4-210ENST00000559550 MALSU1Q96EH3 234 aa-0.3□□□□□ -2.46
CASC4-210ENST00000559550 GPX7Q96SL4 187 aaPredicted RBP-0.3□□□□□ -2.46
CASC4-210ENST00000559550 OR2J1Q9GZK6 312 aa-0.3□□□□□ -2.46
CASC4-210ENST00000559550 MAP1LC3BQ9GZQ8 125 aa-0.3□□□□□ -2.46
CASC4-210ENST00000559550 MUC12Q9UKN1 5478 aa-0.31□□□□□ -2.46
CASC4-210ENST00000559550 NISCHQ9Y2I1 1504 aa-0.31□□□□□ -2.46
CASC4-210ENST00000559550 NDUFC2O95298 119 aa-0.31□□□□□ -2.46
CASC4-210ENST00000559550 CD3DP04234 171 aa-0.31□□□□□ -2.46
CASC4-210ENST00000559550 IFNA4P05014 189 aa-0.31□□□□□ -2.46
CASC4-210ENST00000559550 DIAPH2-AS1Q14236 149 aa-0.31□□□□□ -2.46
CASC4-210ENST00000559550 LINC00269Q8N2A0 174 aa-0.31□□□□□ -2.46
CASC4-210ENST00000559550 PAIP2Q9BPZ3 127 aaKnown RBP-0.31□□□□□ -2.46
CASC4-210ENST00000559550 CST11Q9H112 138 aa-0.31□□□□□ -2.46
CASC4-210ENST00000559550 PRNDQ9UKY0 176 aa-0.31□□□□□ -2.46
CASC4-210ENST00000559550 ARL2BPQ9Y2Y0 163 aa-0.31□□□□□ -2.46
CASC4-210ENST00000559550 JMJD1CQ15652 2540 aa-0.32□□□□□ -2.46
CASC4-210ENST00000559550 A6NN06 94 aa-0.32□□□□□ -2.46
CASC4-210ENST00000559550 HIST1H2BKO60814 126 aa-0.32□□□□□ -2.46
CASC4-210ENST00000559550 HIST1H2BJP06899 126 aa-0.32□□□□□ -2.46
CASC4-210ENST00000559550 VMA21Q3ZAQ7 101 aa-0.32□□□□□ -2.46
CASC4-210ENST00000559550 GLYATL3Q5SZD4 288 aa-0.32□□□□□ -2.46
CASC4-210ENST00000559550 C10orf99Q6UWK7 81 aa-0.32□□□□□ -2.46
CASC4-210ENST00000559550 FAM216BQ8N7L0 139 aa-0.32□□□□□ -2.46
CASC4-210ENST00000559550 NSD1Q96L73 2696 aaPredicted RBP-0.33□□□□□ -2.46
CASC4-210ENST00000559550 TRAV5A0A0B4J249 113 aa-0.33□□□□□ -2.46
CASC4-210ENST00000559550 G3V2T6 193 aa-0.33□□□□□ -2.46
CASC4-210ENST00000559550 LYRM1O43325 122 aa-0.33□□□□□ -2.46
CASC4-210ENST00000559550 IFNA6P05013 189 aa-0.33□□□□□ -2.46
CASC4-210ENST00000559550 SNCBQ16143 134 aa-0.33□□□□□ -2.46
CASC4-210ENST00000559550 PHB2Q99623 299 aa-0.33□□□□□ -2.46
CASC4-210ENST00000559550 NAT8BQ9UHF3 227 aa-0.33□□□□□ -2.46
CASC4-210ENST00000559550 PYCARDQ9ULZ3 195 aa-0.33□□□□□ -2.46
CASC4-210ENST00000559550 N4BP2Q86UW6 1770 aaPredicted RBP-0.33□□□□□ -2.46
CASC4-210ENST00000559550 NUP210LQ5VU65 1888 aa-0.33□□□□□ -2.46
CASC4-210ENST00000559550 RIIAD1A6NNX1 92 aa-0.34□□□□□ -2.46
CASC4-210ENST00000559550 H7C1C5 153 aa-0.34□□□□□ -2.46
CASC4-210ENST00000559550 AIPO00170 330 aa-0.34□□□□□ -2.46
CASC4-210ENST00000559550 SULT1C4O75897 302 aa-0.34□□□□□ -2.46
CASC4-210ENST00000559550 PIAS1O75925 651 aa-0.34□□□□□ -2.46
CASC4-210ENST00000559550 IFNA14P01570 189 aa-0.34□□□□□ -2.46
CASC4-210ENST00000559550 IGHV3-30P01768 117 aa-0.34□□□□□ -2.46
CASC4-210ENST00000559550 IGHV3-30-5P0DP03 117 aa-0.34□□□□□ -2.46
CASC4-210ENST00000559550 OGNP20774 298 aaKnown RBP-0.34□□□□□ -2.46
CASC4-210ENST00000559550 RPL37P61927 97 aaKnown RBP-0.34□□□□□ -2.46
CASC4-210ENST00000559550 LCN6P62502 163 aa-0.34□□□□□ -2.46
CASC4-210ENST00000559550 HBBP68871 147 aa-0.34□□□□□ -2.46
CASC4-210ENST00000559550 SPINK13Q1W4C9 94 aa-0.34□□□□□ -2.46
CASC4-210ENST00000559550 KRTAP6-1Q3LI64 71 aa-0.34□□□□□ -2.46
CASC4-210ENST00000559550 SCGB2B2Q4G0G5 96 aa-0.34□□□□□ -2.46
CASC4-210ENST00000559550 BCORL1Q5H9F3 1711 aa-0.34□□□□□ -2.46
CASC4-210ENST00000559550 XAF1Q6GPH4 301 aa-0.34□□□□□ -2.46
CASC4-210ENST00000559550 F8P00451 2351 aa-0.35□□□□□ -2.47
CASC4-210ENST00000559550 CD109Q6YHK3 1445 aa-0.35□□□□□ -2.47
CASC4-210ENST00000559550 CST7O76096 145 aa-0.35□□□□□ -2.47
CASC4-210ENST00000559550 REEP5Q00765 189 aa-0.35□□□□□ -2.47
CASC4-210ENST00000559550 NEDD8Q15843 81 aa-0.35□□□□□ -2.47
CASC4-210ENST00000559550 C1orf140Q5VVS0 124 aa-0.35□□□□□ -2.47
CASC4-210ENST00000559550 PHF5AQ7RTV0 110 aaKnown RBP-0.35□□□□□ -2.47
CASC4-210ENST00000559550 LINC00208Q96KT6 92 aa-0.35□□□□□ -2.47
CASC4-210ENST00000559550 LPAR5Q9H1C0 372 aa-0.35□□□□□ -2.47
CASC4-210ENST00000559550 CTTNBP2Q8WZ74 1663 aa-0.35□□□□□ -2.47
CASC4-210ENST00000559550 UBR2Q8IWV8 1755 aa-0.35□□□□□ -2.47
CASC4-210ENST00000559550 NCAPD3P42695 1498 aa-0.35□□□□□ -2.47
CASC4-210ENST00000559550 UHRF1BP1Q6BDS2 1440 aa-0.36□□□□□ -2.47
CASC4-210ENST00000559550 ZNF56Q15929 161 aa-0.36□□□□□ -2.47
CASC4-210ENST00000559550 ANGPTL5Q86XS5 388 aa-0.36□□□□□ -2.47
CASC4-210ENST00000559550 C5orf17Q8NAS9 161 aa-0.36□□□□□ -2.47
CASC4-210ENST00000559550 SS18L2Q9UHA2 77 aa-0.36□□□□□ -2.47
CASC4-210ENST00000559550 FLNCQ14315 2725 aa-0.36□□□□□ -2.47
CASC4-210ENST00000559550 A0A1W2PRS3 328 aa-0.37□□□□□ -2.47
CASC4-210ENST00000559550 PHBP35232 272 aa-0.37□□□□□ -2.47
CASC4-210ENST00000559550 CAPZBP47756 277 aa-0.37□□□□□ -2.47
CASC4-210ENST00000559550 FADDQ13158 208 aa-0.37□□□□□ -2.47
CASC4-210ENST00000559550 AKR1C8PQ5T2L2 129 aa-0.37□□□□□ -2.47
CASC4-210ENST00000559550 CSAG1Q6PB30 78 aa-0.37□□□□□ -2.47
CASC4-210ENST00000559550 PLEKHB2Q96CS7 222 aa-0.37□□□□□ -2.47
CASC4-210ENST00000559550 TAF9BQ9HBM6 251 aa-0.37□□□□□ -2.47
CASC4-210ENST00000559550 SSR3Q9UNL2 185 aa-0.37□□□□□ -2.47
CASC4-210ENST00000559550 TPRKBQ9Y3C4 175 aa-0.37□□□□□ -2.47
CASC4-210ENST00000559550 ASXL3Q9C0F0 2248 aa-0.37□□□□□ -2.47
CASC4-210ENST00000559550 KDM6BO15054 1643 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 PRORSD1PA6NEY8 169 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 ATG12O94817 140 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 RPS3P23396 243 aaKnown RBP eCLIP-0.38□□□□□ -2.47
CASC4-210ENST00000559550 HSD11B1P28845 292 aa-0.38□□□□□ -2.47
CASC4-210ENST00000559550 RPL35P42766 123 aaKnown RBP-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms