RNA–Protein interactions for RNA: ENST00000557060.1

SYNE2-225, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 3,203 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-225ENST00000557060 TGOLN2O43493 480 aa4.59□□□□□ -1.68
SYNE2-225ENST00000557060 RPL7P18124 248 aaKnown RBP4.59□□□□□ -1.68
SYNE2-225ENST00000557060 TAS2R60P59551 318 aa4.59□□□□□ -1.68
SYNE2-225ENST00000557060 Q86TA4 180 aa4.59□□□□□ -1.68
SYNE2-225ENST00000557060 NUP35Q8NFH5 326 aa4.59□□□□□ -1.68
SYNE2-225ENST00000557060 GLMPQ8WWB7 406 aa4.59□□□□□ -1.68
SYNE2-225ENST00000557060 ZC2HC1AQ96GY0 325 aa4.59□□□□□ -1.68
SYNE2-225ENST00000557060 OTORQ9NRC9 128 aa4.59□□□□□ -1.68
SYNE2-225ENST00000557060 PRAC2D3DTV9 90 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 K7EQM0 130 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 PHOX2AO14813 284 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 HOXA3O43365 443 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-225ENST00000557060 SLC25A16P16260 332 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 CRISP2P16562 243 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 PPIFP30405 207 aaKnown RBP4.58□□□□□ -1.68
SYNE2-225ENST00000557060 SRIP30626 198 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 RELQ04864 619 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-225ENST00000557060 OSTCQ9NRP0 149 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 PSG8Q9UQ74 426 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 SMAD5-AS1Q9Y6J3 95 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 KMT2BQ9UMN6 2715 aaPredicted RBP4.58□□□□□ -1.68
SYNE2-225ENST00000557060 TRAV20A0A0B4J274 112 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 M0QZ24 198 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 NTF3P20783 257 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 SLAQ13239 276 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 IQCJQ1A5X6 159 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 OR4X2Q8NGF9 303 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 FMC1Q96HJ9 113 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 DUX3Q96PT4 197 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 METTL26Q96S19 204 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 CLEC5AQ9NY25 188 aa4.58□□□□□ -1.68
SYNE2-225ENST00000557060 SETXQ7Z333 2677 aaKnown RBP4.58□□□□□ -1.68
SYNE2-225ENST00000557060 DIRC3C9JPN6 131 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 CHEK1O14757 476 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 IGLV2-11P01706 119 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 AMBPP02760 352 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 CT45A10P0DMU9 189 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 PMCHP20382 165 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 TM4SF20Q53R12 229 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 GTSF1Q8WW33 167 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 SAMD10Q9BYL1 202 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 RPP21Q9H633 154 aaKnown RBP4.57□□□□□ -1.68
SYNE2-225ENST00000557060 TRBV9A0A0B4J1U6 114 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 A6NDX4 124 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 BUB3O43684 328 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 ZNF253O75346 499 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 SERF1AO75920 110 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 LTAP01374 205 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 S100A8P05109 93 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 IGHV4-31P0DP07 118 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 DEFB136Q30KP8 78 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 Q6ZQT7 251 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 TMEM183AQ8IXX5 376 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 FAM19A2Q8N3H0 131 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 VN1R17PQ8TDU5 208 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 MEGF9Q9H1U4 602 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 PRO1933Q9H354 126 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 TMEM14CQ9P0S9 112 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 POLR3KQ9Y2Y1 108 aaPredicted RBP4.57□□□□□ -1.68
SYNE2-225ENST00000557060 CLPSL1A2RUU4 121 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 SPRY2O43597 315 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 APCSP02743 223 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 ORM1P02763 201 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 TYMSP04818 313 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 CSN3P07498 182 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 DSCR9P59020 149 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 PSG3Q16557 428 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 GDF5OSQ5U4N7 250 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 LCN12Q6JVE5 192 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 C16orf92Q96LL3 132 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 RCHY1Q96PM5 261 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 LY96Q9Y6Y9 160 aa4.57□□□□□ -1.68
SYNE2-225ENST00000557060 TEP1Q99973 2627 aaKnown RBP4.56□□□□□ -1.68
SYNE2-225ENST00000557060 PDZD2O15018 2839 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 TRBV7-1A0A0A6YYK4 115 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 SERTM2A0A1B0GWG4 89 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 F6UB75 175 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 MRPS12O15235 138 aaKnown RBP4.56□□□□□ -1.68
SYNE2-225ENST00000557060 SCGB1D1O95968 90 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 IGKV3-20P01619 116 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 PF4P02776 101 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 RPLP1P05386 114 aaKnown RBP4.56□□□□□ -1.68
SYNE2-225ENST00000557060 RAB9AP51151 201 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 PMCHL1Q16048 86 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 S100A7AQ86SG5 101 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 TSKUQ8WUA8 353 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 NAGKQ9UJ70 344 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 OTOGQ6ZRI0 2925 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 SMIM27A0A1W2PRY6 76 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 FAM181BA6NEQ2 426 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 IGHG2P01859 326 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 CRIP1P50238 77 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 ZNF138P52744 262 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 TMEM136Q6ZRR5 245 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 GRAMD2BQ96HH9 432 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 ZNF48Q96MX3 618 aaPredicted RBP4.56□□□□□ -1.68
SYNE2-225ENST00000557060 MLST8Q9BVC4 326 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 KLF12Q9Y4X4 402 aa4.56□□□□□ -1.68
SYNE2-225ENST00000557060 IZUMO1RA6ND01 250 aa4.55□□□□□ -1.68
SYNE2-225ENST00000557060 A8MWL6 223 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms