RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 A0A1W2PRD5 423 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 A0A1W2PRF3 423 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 A0A1W2PRM7 423 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.49□□□□□ -1.53
TDP1-213ENST00000555880 LY6HO94772 140 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 ZNF138P52744 262 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 RPS20P60866 119 aaKnown RBP5.49□□□□□ -1.53
TDP1-213ENST00000555880 MINOS1Q5TGZ0 78 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 LINC00173Q6ZV60 143 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 VMO1Q7Z5L0 202 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 FANCD2OSQ96PS1 177 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 KRTAP9-2Q9BYQ4 174 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 MS4A6AQ9H2W1 248 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 RABAC1Q9UI14 185 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 MINOS1-NBL1R4GNA1 71 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 hDV102S1A0JD36 115 aa5.48□□□□□ -1.53
TDP1-213ENST00000555880 OR2T8A6NH00 312 aa5.48□□□□□ -1.53
TDP1-213ENST00000555880 SH2D1AO60880 128 aa5.48□□□□□ -1.53
TDP1-213ENST00000555880 NDUFB8O95169 186 aa5.48□□□□□ -1.53
TDP1-213ENST00000555880 TMEM11P17152 192 aa5.48□□□□□ -1.53
TDP1-213ENST00000555880 RELQ04864 619 aaPredicted RBP5.48□□□□□ -1.53
TDP1-213ENST00000555880 LYZL1Q6UWQ5 148 aa5.48□□□□□ -1.53
TDP1-213ENST00000555880 ZNF493Q6ZR52 646 aa5.48□□□□□ -1.53
TDP1-213ENST00000555880 C8orf49Q96NF6 230 aa5.48□□□□□ -1.53
TDP1-213ENST00000555880 ASCL2Q99929 193 aa5.48□□□□□ -1.53
TDP1-213ENST00000555880 PPP1R14DQ9NXH3 145 aa5.48□□□□□ -1.53
TDP1-213ENST00000555880 COX11Q9Y6N1 276 aa5.48□□□□□ -1.53
TDP1-213ENST00000555880 ZZEF1O43149 2961 aa5.48□□□□□ -1.53
TDP1-213ENST00000555880 ARHGAP32A7KAX9 2087 aa5.48□□□□□ -1.53
TDP1-213ENST00000555880 TMSB15BA0A087X1C1 80 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 ZNF785A8K8V0 405 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 TCF21O43680 179 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 FAM106CPP0CH98 169 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 BMI1P35226 326 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 CRIP1P50238 77 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 PTTG1IPP53801 180 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 LINC01545Q5VT33 79 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 C12orf54Q6X4T0 127 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 Q71RC1 249 aaPredicted RBP5.47□□□□□ -1.53
TDP1-213ENST00000555880 ORMDL3Q8N138 153 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 PRELID3AQ96N28 172 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 WNK2Q9Y3S1 2297 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 NBASA2RRP1 2371 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 IGKV2-40A0A087WW87 121 aaPredicted RBP5.47□□□□□ -1.53
TDP1-213ENST00000555880 D6R8Y8 96 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 F8W735 103 aaPredicted RBP5.47□□□□□ -1.53
TDP1-213ENST00000555880 IGKV2D-40P01614 121 aaPredicted RBP5.47□□□□□ -1.53
TDP1-213ENST00000555880 RAB9AP51151 201 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 NDPQ00604 133 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 FAM104BQ5XKR9 115 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 UNQ5815/PRO19632Q6UWF5 114 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 COX8CQ7Z4L0 72 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 PRR25Q96S07 402 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 PMCHL2Q9BQD1 86 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 ZNF747Q9BV97 191 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 PRORYQ9H606 182 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 SCRT2Q9NQ03 307 aa5.47□□□□□ -1.53
TDP1-213ENST00000555880 IGF2RP11717 2491 aa5.46□□□□□ -1.53
TDP1-213ENST00000555880 TMEM8BA6NDV4 472 aa5.46□□□□□ -1.54
TDP1-213ENST00000555880 OVOL3O00110 214 aa5.46□□□□□ -1.54
TDP1-213ENST00000555880 NUDT3O95989 172 aa5.46□□□□□ -1.54
TDP1-213ENST00000555880 IGHV3-23P01764 117 aa5.46□□□□□ -1.54
TDP1-213ENST00000555880 CTSGP08311 255 aa5.46□□□□□ -1.54
TDP1-213ENST00000555880 PRB4P10163 310 aaPredicted RBP5.46□□□□□ -1.54
TDP1-213ENST00000555880 IFI27P40305 119 aaPredicted RBP5.46□□□□□ -1.54
TDP1-213ENST00000555880 HIST1H1AQ02539 215 aaPredicted RBP5.46□□□□□ -1.54
TDP1-213ENST00000555880 EBI3Q14213 229 aa5.46□□□□□ -1.54
TDP1-213ENST00000555880 TWIST1Q15672 202 aa5.46□□□□□ -1.54
TDP1-213ENST00000555880 MPV17L2Q567V2 206 aa5.46□□□□□ -1.54
TDP1-213ENST00000555880 C11orf71Q6IPW1 123 aa5.46□□□□□ -1.54
TDP1-213ENST00000555880 BCL6BQ8N143 479 aaPredicted RBP5.46□□□□□ -1.54
TDP1-213ENST00000555880 Q8N6K4 173 aa5.46□□□□□ -1.54
TDP1-213ENST00000555880 FER1L6-AS1Q8NA97 138 aa5.46□□□□□ -1.54
TDP1-213ENST00000555880 CBY1Q9Y3M2 126 aa5.46□□□□□ -1.54
TDP1-213ENST00000555880 U3KQK5 164 aa5.46□□□□□ -1.54
TDP1-213ENST00000555880 HRNRQ86YZ3 2850 aaPredicted RBP5.46□□□□□ -1.54
TDP1-213ENST00000555880 KRTAP9-6A0A140TA67 174 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 LOC389332A0A1B0GUA5 103 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 TMEM213A2RRL7 107 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 CKS2P33552 79 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 ADORA2A-AS1P86434 159 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 UBE2V1Q13404 147 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 LY6DQ14210 128 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 AMN1Q8IY45 258 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 OR8A1Q8NGG7 326 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 SIGLEC8Q9NYZ4 499 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 DCHS2Q6V1P9 2916 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 IGHV7-81A0A0B4J1V7 117 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 GOSR1O95249 250 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 HBDP02042 147 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 ORM1P02763 201 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 EGR2P11161 476 aaPredicted RBP5.45□□□□□ -1.54
TDP1-213ENST00000555880 GPR183P32249 361 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 SRSF2Q01130 221 aaKnown RBP5.45□□□□□ -1.54
TDP1-213ENST00000555880 VAMP3Q15836 100 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 C15orf32Q32M92 178 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 MRPL51Q4U2R6 128 aaKnown RBP5.45□□□□□ -1.54
TDP1-213ENST00000555880 FBLN7Q53RD9 439 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 DTX2Q86UW9 622 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms