RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 SHISA9B4DS77 424 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 B9A039 149 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 CLEC3BP05452 202 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 IGLC1P0CG04 106 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 BMI1P35226 326 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 SCGB2A2Q13296 93 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 FAM231DQ6ZW35 169 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 NDFIP1Q9BT67 221 aa9.08□□□□□ -0.96
PTPN21-205ENST00000554270 SPRY2O43597 315 aa9.07□□□□□ -0.96
PTPN21-205ENST00000554270 ARL3P36405 182 aa9.07□□□□□ -0.96
PTPN21-205ENST00000554270 FAM120AOSQ5T036 256 aa9.07□□□□□ -0.96
PTPN21-205ENST00000554270 CFAP161Q6P656 301 aa9.07□□□□□ -0.96
PTPN21-205ENST00000554270 Q8NA96 180 aa9.07□□□□□ -0.96
PTPN21-205ENST00000554270 ATP5L2Q7Z4Y8 100 aa9.07□□□□□ -0.96
PTPN21-205ENST00000554270 MYO9AB2RTY4 2548 aa9.07□□□□□ -0.96
PTPN21-205ENST00000554270 K7EMI3 77 aa9.07□□□□□ -0.96
PTPN21-205ENST00000554270 LOXL1Q08397 574 aaPredicted RBP9.07□□□□□ -0.96
PTPN21-205ENST00000554270 DPM3Q9P2X0 92 aa9.07□□□□□ -0.96
PTPN21-205ENST00000554270 GP9P14770 177 aa9.06□□□□□ -0.96
PTPN21-205ENST00000554270 MFAP4P55083 255 aa9.06□□□□□ -0.96
PTPN21-205ENST00000554270 TCF15Q12870 199 aa9.06□□□□□ -0.96
PTPN21-205ENST00000554270 ERCC8Q13216 396 aa9.06□□□□□ -0.96
PTPN21-205ENST00000554270 TMEM30BQ3MIR4 351 aa9.06□□□□□ -0.96
PTPN21-205ENST00000554270 ZNF414Q96IQ9 312 aa9.06□□□□□ -0.96
PTPN21-205ENST00000554270 C21orf62Q9NYP8 219 aa9.06□□□□□ -0.96
PTPN21-205ENST00000554270 TMEM238C9JI98 176 aa9.06□□□□□ -0.96
PTPN21-205ENST00000554270 IGKV1-17P01599 117 aa9.06□□□□□ -0.96
PTPN21-205ENST00000554270 TTTY13Q9BZ97 58 aa9.06□□□□□ -0.96
PTPN21-205ENST00000554270 RAB1BQ9H0U4 201 aa9.06□□□□□ -0.96
PTPN21-205ENST00000554270 MRPS16Q9Y3D3 137 aaKnown RBP9.06□□□□□ -0.96
PTPN21-205ENST00000554270 PSMB11A5LHX3 300 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 K7ERU9 68 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 UBTD1Q9HAC8 227 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 USP9XQ93008 2570 aaPredicted RBP9.05□□□□□ -0.96
PTPN21-205ENST00000554270 PTPRBP23467 1997 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 PIEZO1Q92508 2521 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 TRAV8-6A0A0B4J262 113 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 NBR2O15453 112 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 RNF182Q8N6D2 247 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 THAP8Q8NA92 274 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 ORAOV1Q8WV07 137 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 ST20Q9HBF5 79 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 CEACAM3P40198 252 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 GAGE1Q13065 139 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 RASL11AQ6T310 242 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 CHCHD1Q96BP2 118 aaKnown RBP9.05□□□□□ -0.96
PTPN21-205ENST00000554270 TMEM160Q9NX00 188 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 MSRB1Q9NZV6 116 aa9.05□□□□□ -0.96
PTPN21-205ENST00000554270 LOC105371242A0A075B767 164 aa9.04□□□□□ -0.96
PTPN21-205ENST00000554270 GOSR1O95249 250 aa9.04□□□□□ -0.96
PTPN21-205ENST00000554270 LTAP01374 205 aa9.04□□□□□ -0.96
PTPN21-205ENST00000554270 ORMDL3Q8N138 153 aa9.04□□□□□ -0.96
PTPN21-205ENST00000554270 RAXQ9Y2V3 346 aa9.04□□□□□ -0.96
PTPN21-205ENST00000554270 TRBV19A0A075B6N1 114 aa9.04□□□□□ -0.96
PTPN21-205ENST00000554270 SH2D1AO60880 128 aa9.04□□□□□ -0.96
PTPN21-205ENST00000554270 SCGB2A1O75556 95 aa9.04□□□□□ -0.96
PTPN21-205ENST00000554270 S100A4P26447 101 aaKnown RBP9.04□□□□□ -0.96
PTPN21-205ENST00000554270 SFTA2Q6UW10 78 aa9.04□□□□□ -0.96
PTPN21-205ENST00000554270 PSG9Q00887 426 aa9.04□□□□□ -0.96
PTPN21-205ENST00000554270 FER1L6-AS1Q8NA97 138 aa9.04□□□□□ -0.96
PTPN21-205ENST00000554270 URB1-AS1Q96HZ7 61 aa9.04□□□□□ -0.96
PTPN21-205ENST00000554270 PSG3Q16557 428 aa9.03□□□□□ -0.96
PTPN21-205ENST00000554270 GTF2H5Q6ZYL4 71 aa9.03□□□□□ -0.96
PTPN21-205ENST00000554270 NDPQ00604 133 aa9.03□□□□□ -0.96
PTPN21-205ENST00000554270 BVES-AS1Q5T3Y7 98 aa9.03□□□□□ -0.96
PTPN21-205ENST00000554270 CLEC19AQ6UXS0 136 aa9.03□□□□□ -0.96
PTPN21-205ENST00000554270 ARPC1AQ92747 370 aa9.03□□□□□ -0.96
PTPN21-205ENST00000554270 GATA1P15976 413 aaPredicted RBP9.03□□□□□ -0.96
PTPN21-205ENST00000554270 PET117Q6UWS5 81 aa9.03□□□□□ -0.96
PTPN21-205ENST00000554270 WFDC12Q8WWY7 111 aa9.03□□□□□ -0.96
PTPN21-205ENST00000554270 A1L4Q6 167 aa9.02□□□□□ -0.96
PTPN21-205ENST00000554270 TMEM97Q5BJF2 176 aa9.02□□□□□ -0.96
PTPN21-205ENST00000554270 SPANXN1Q5VSR9 72 aa9.02□□□□□ -0.96
PTPN21-205ENST00000554270 VGLL1Q99990 258 aa9.02□□□□□ -0.96
PTPN21-205ENST00000554270 COL27A1Q8IZC6 1860 aaPredicted RBP9.02□□□□□ -0.96
PTPN21-205ENST00000554270 ZNF491Q8N8L2 437 aa9.02□□□□□ -0.97
PTPN21-205ENST00000554270 WIPF2Q8TF74 440 aaPredicted RBP9.02□□□□□ -0.97
PTPN21-205ENST00000554270 FOXC2Q99958 501 aa9.02□□□□□ -0.97
PTPN21-205ENST00000554270 SHANK2-AS3Q9BTD1 123 aa9.02□□□□□ -0.97
PTPN21-205ENST00000554270 RABAC1Q9UI14 185 aa9.02□□□□□ -0.97
PTPN21-205ENST00000554270 LEPP41159 167 aa9.02□□□□□ -0.97
PTPN21-205ENST00000554270 CDSNQ15517 529 aa9.02□□□□□ -0.97
PTPN21-205ENST00000554270 GLMPQ8WWB7 406 aa9.02□□□□□ -0.97
PTPN21-205ENST00000554270 SOX21Q9Y651 276 aaPredicted RBP9.02□□□□□ -0.97
PTPN21-205ENST00000554270 SONP18583 2426 aaKnown RBP9.02□□□□□ -0.97
PTPN21-205ENST00000554270 RPL7P18124 248 aaKnown RBP9.02□□□□□ -0.97
PTPN21-205ENST00000554270 KLF5Q13887 457 aaPredicted RBP9.02□□□□□ -0.97
PTPN21-205ENST00000554270 LY6DQ14210 128 aa9.02□□□□□ -0.97
PTPN21-205ENST00000554270 IFI27L1Q96BM0 104 aa9.02□□□□□ -0.97
PTPN21-205ENST00000554270 SIGLEC8Q9NYZ4 499 aa9.02□□□□□ -0.97
PTPN21-205ENST00000554270 CHTOPQ9Y3Y2 248 aaKnown RBP9.02□□□□□ -0.97
PTPN21-205ENST00000554270 WNK1Q9H4A3 2382 aa9.01□□□□□ -0.97
PTPN21-205ENST00000554270 A0A1B0GXF2 115 aa9.01□□□□□ -0.97
PTPN21-205ENST00000554270 LCNL1Q6ZST4 164 aa9.01□□□□□ -0.97
PTPN21-205ENST00000554270 GTSCR1Q86UQ5 136 aa9.01□□□□□ -0.97
PTPN21-205ENST00000554270 CCDC168Q8NDH2 2452 aa9.01□□□□□ -0.97
PTPN21-205ENST00000554270 DCHS2Q6V1P9 2916 aa9.01□□□□□ -0.97
PTPN21-205ENST00000554270 GAGE12BA1L429 117 aa9.01□□□□□ -0.97
PTPN21-205ENST00000554270 TEX22C9J3V5 150 aa9.01□□□□□ -0.97
PTPN21-205ENST00000554270 NPYP01303 97 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms