RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 SUB1P53999 127 aaKnown RBP eCLIP1.36□□□□□ -2.19
PTCH1-223ENST00000551623 ERHP84090 104 aaKnown RBP1.36□□□□□ -2.19
PTCH1-223ENST00000551623 FGL1Q08830 312 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 MEF2DQ14814 521 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 C2orf83Q53S99 150 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 FAM162BQ5T6X4 162 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 TMPRSS11AQ6ZMR5 421 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 ZNF818PQ6ZRF7 136 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 KRTAP11-1Q8IUC1 163 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 OR8A1Q8NGG7 326 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 OR10G9Q8NGN4 311 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 OR10R2Q8NGX6 335 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 Q8TAT8 98 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 RNASEH2CQ8TDP1 164 aaKnown RBP1.36□□□□□ -2.19
PTCH1-223ENST00000551623 C7orf33Q8WU49 177 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 BAALCQ8WXS3 180 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 IL22RA2Q969J5 263 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 SLC25A38Q96DW6 304 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 RMI2Q96E14 147 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 LINC00052Q96N35 136 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 SLC25A39Q9BZJ4 359 aaPredicted RBP1.36□□□□□ -2.19
PTCH1-223ENST00000551623 DIMT1Q9UNQ2 313 aaKnown RBP1.36□□□□□ -2.19
PTCH1-223ENST00000551623 NSG2Q9Y328 171 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 SSPOA2VEC9 5147 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 DNAH8Q96JB1 4490 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 IGLV1-50A0A075B6I6 118 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 A0A087X0K7 114 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 TRAV8-6A0A0B4J262 113 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 TRAV26-2A0A0B4J265 109 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 TNFSF12O43508 249 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 SSX5O60225 188 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 IGKV1-39P01597 117 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 IGKV1D-39P04432 117 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 NMBP08949 121 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 SEC11BP0C7V7 166 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 LINC00694P0DN24 101 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 ZNF182P17025 639 aaPredicted RBP1.35□□□□□ -2.19
PTCH1-223ENST00000551623 CXCL2P19875 107 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 G6PCP35575 357 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 SNCAP37840 140 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 HTR2BP41595 481 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 GALR1P47211 349 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 RND2P52198 227 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 WNT4P56705 351 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 MT1HP80294 61 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 BAK1Q16611 211 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 HACD4Q5VWC8 232 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 DHRS11Q6UWP2 260 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 DPPA3Q6W0C5 159 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 ZNF555Q8NEP9 628 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 OR1B1Q8NGR6 318 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 OR51H1Q8NH63 302 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 OR4A16Q8NH70 328 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 APH1BQ8WW43 257 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 MAFIPQ8WZ33 124 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 RASL10AQ92737 203 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 FAM3DQ96BQ1 224 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 FAM19A4Q96LR4 140 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 CHCHD7Q9BUK0 85 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 SLC25A31Q9H0C2 315 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 SH3BGRL3Q9H299 93 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 GSN-AS1Q9NRJ2 163 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 PPP1R14DQ9NXH3 145 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 RAB22AQ9UL26 194 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 KLF12Q9Y4X4 402 aa1.35□□□□□ -2.19
PTCH1-223ENST00000551623 IGLV7-46A0A075B6I9 117 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 IGKV1D-37A0A075B6S9 117 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 A0A087WWC5 75 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 TRGV1A0A0A0MS02 117 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 PNMA8CA0A1B0GUJ8 204 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 TRBV6-4A0A1B0GX49 114 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 IRGMA1A4Y4 181 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 EFCAB10A6NFE3 127 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 GGTLC3B5MD39 225 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 H7C1H1 209 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 EI24O14681 340 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 WBP4O75554 376 aaKnown RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 PGLYRP1O75594 196 aaPredicted RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 SCGNO76038 276 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 CFDP00746 253 aaPredicted RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 RLN1P04808 185 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 SLC25A5P05141 298 aaKnown RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 PFN1P07737 140 aaKnown RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 HTN1P15515 57 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 CRISP2P16562 243 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 PSMA1P25786 263 aaKnown RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 FCGR2CP31995 323 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 TALDO1P37837 337 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 LPAR6P43657 344 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 OR10A3P58181 314 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 RPS25P62851 125 aaKnown RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 CTAG1AP78358 180 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 HIST1H1AQ02539 215 aaPredicted RBP1.34□□□□□ -2.19
PTCH1-223ENST00000551623 UBE2V1Q13404 147 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 INSL4Q14641 139 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 PRR4Q16378 134 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 GUK1Q16774 197 aa1.34□□□□□ -2.19
PTCH1-223ENST00000551623 C2orf76Q3KRA6 126 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms