RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 CITED1Q99966 193 aa10.03□□□□□ -0.8
SMG8-202ENST00000543872 CFAP47Q6ZTR5 3102 aa10.03□□□□□ -0.8
SMG8-202ENST00000543872 IGKV3-15P01624 115 aa10.03□□□□□ -0.8
SMG8-202ENST00000543872 SRSF6Q13247 344 aaKnown RBP10.03□□□□□ -0.8
SMG8-202ENST00000543872 OR10X1Q8NGY0 326 aa10.03□□□□□ -0.8
SMG8-202ENST00000543872 HHLA3Q9XRX5 114 aa10.03□□□□□ -0.8
SMG8-202ENST00000543872 POLEQ07864 2286 aa10.03□□□□□ -0.8
SMG8-202ENST00000543872 TRAV40A0A0B4J280 105 aa10.03□□□□□ -0.8
SMG8-202ENST00000543872 NPIPB5A8MRT5 1133 aa10.03□□□□□ -0.8
SMG8-202ENST00000543872 GAS8-AS1O95177 125 aa10.03□□□□□ -0.8
SMG8-202ENST00000543872 RITA1Q96K30 269 aa10.03□□□□□ -0.8
SMG8-202ENST00000543872 MBNL2Q5VZF2 373 aaKnown RBP10.02□□□□□ -0.8
SMG8-202ENST00000543872 Q6ZT83 130 aa10.02□□□□□ -0.8
SMG8-202ENST00000543872 TMEM105Q8N8V8 129 aa10.02□□□□□ -0.8
SMG8-202ENST00000543872 SLC25A39Q9BZJ4 359 aaPredicted RBP10.02□□□□□ -0.8
SMG8-202ENST00000543872 WDFY4Q6ZS81 3184 aa10.02□□□□□ -0.8
SMG8-202ENST00000543872 TMEM8BA6NDV4 472 aa10.02□□□□□ -0.81
SMG8-202ENST00000543872 TMEM167AQ8TBQ9 72 aa10.02□□□□□ -0.81
SMG8-202ENST00000543872 HIGD1BQ9P298 99 aa10.02□□□□□ -0.81
SMG8-202ENST00000543872 NTN3O00634 580 aaPredicted RBP10.02□□□□□ -0.81
SMG8-202ENST00000543872 OR4C13Q8NGP0 309 aa10.02□□□□□ -0.81
SMG8-202ENST00000543872 TMEM133Q9H2Q1 129 aa10.02□□□□□ -0.81
SMG8-202ENST00000543872 MSRB1Q9NZV6 116 aa10.02□□□□□ -0.81
SMG8-202ENST00000543872 IGHV1-18A0A0C4DH31 117 aa10.01□□□□□ -0.81
SMG8-202ENST00000543872 PRSS29PA6NIE9 313 aa10.01□□□□□ -0.81
SMG8-202ENST00000543872 TRGV9Q99603 122 aa10.01□□□□□ -0.81
SMG8-202ENST00000543872 PCSK5Q92824 1860 aa10.01□□□□□ -0.81
SMG8-202ENST00000543872 GATA1P15976 413 aaPredicted RBP10.01□□□□□ -0.81
SMG8-202ENST00000543872 KLF17Q5JT82 389 aaPredicted RBP10.01□□□□□ -0.81
SMG8-202ENST00000543872 PTH2Q96A98 100 aa10.01□□□□□ -0.81
SMG8-202ENST00000543872 NCOR1O75376 2440 aa10.01□□□□□ -0.81
SMG8-202ENST00000543872 GPR179Q6PRD1 2367 aa10.01□□□□□ -0.81
SMG8-202ENST00000543872 ZDBF2Q9HCK1 2354 aa10□□□□□ -0.81
SMG8-202ENST00000543872 DPM2O94777 84 aa10□□□□□ -0.81
SMG8-202ENST00000543872 PRB3Q04118 309 aaPredicted RBP10□□□□□ -0.81
SMG8-202ENST00000543872 KLRD1Q13241 179 aa10□□□□□ -0.81
SMG8-202ENST00000543872 MAP1LC3AQ9H492 121 aa10□□□□□ -0.81
SMG8-202ENST00000543872 YAE1D1Q9NRH1 226 aa10□□□□□ -0.81
SMG8-202ENST00000543872 ZFHX4Q86UP3 3567 aa10□□□□□ -0.81
SMG8-202ENST00000543872 LOC107984156A0A0G2JMH3 177 aa10□□□□□ -0.81
SMG8-202ENST00000543872 NDUFA3O95167 84 aa10□□□□□ -0.81
SMG8-202ENST00000543872 ATP5J2P56134 94 aa10□□□□□ -0.81
SMG8-202ENST00000543872 FOXI1Q12951 378 aa10□□□□□ -0.81
SMG8-202ENST00000543872 RRN3P1Q2M238 152 aa10□□□□□ -0.81
SMG8-202ENST00000543872 ZNF493Q6ZR52 646 aa10□□□□□ -0.81
SMG8-202ENST00000543872 ARL17AQ8IVW1 177 aa10□□□□□ -0.81
SMG8-202ENST00000543872 M0R1B8 84 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 SCGB2A1O75556 95 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 ZNF502Q8TBZ5 544 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 TMEM158Q8WZ71 300 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 GAFA1Q96PS6 74 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 RNF7Q9UBF6 113 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 K7ESF4 209 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 SH2D1AO60880 128 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 VMA21Q3ZAQ7 101 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 Q6AWC8 147 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 MRPL35Q9NZE8 188 aaKnown RBP9.99□□□□□ -0.81
SMG8-202ENST00000543872 PRO0461Q9UI25 63 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 S4R3C0 116 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 CCDC179H3BU77 68 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 ZNF833PQ6ZTB9 187 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 NGBQ9NPG2 151 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 U3KQK5 164 aa9.99□□□□□ -0.81
SMG8-202ENST00000543872 TRIOBPQ9H2D6 2365 aa9.98□□□□□ -0.81
SMG8-202ENST00000543872 PSMB2P49721 201 aa9.98□□□□□ -0.81
SMG8-202ENST00000543872 NHLRC4P0CG21 123 aaPredicted RBP9.98□□□□□ -0.81
SMG8-202ENST00000543872 RPL27AP46776 148 aaKnown RBP9.98□□□□□ -0.81
SMG8-202ENST00000543872 PAX8Q06710 450 aa9.98□□□□□ -0.81
SMG8-202ENST00000543872 ATP1A1-AS1Q5TC04 95 aa9.98□□□□□ -0.81
SMG8-202ENST00000543872 RASL11BQ9BPW5 248 aa9.98□□□□□ -0.81
SMG8-202ENST00000543872 TRBV19A0A075B6N1 114 aa9.98□□□□□ -0.81
SMG8-202ENST00000543872 TGFAP01135 160 aa9.98□□□□□ -0.81
SMG8-202ENST00000543872 CNTFRP26992 372 aa9.98□□□□□ -0.81
SMG8-202ENST00000543872 ASPMQ8IZT6 3477 aa9.98□□□□□ -0.81
SMG8-202ENST00000543872 TRBV20-1A0A075B6N2 111 aa9.97□□□□□ -0.81
SMG8-202ENST00000543872 LHBP01229 141 aa9.97□□□□□ -0.81
SMG8-202ENST00000543872 NFE4Q86UQ8 179 aa9.97□□□□□ -0.81
SMG8-202ENST00000543872 GATD1Q8NB37 220 aa9.97□□□□□ -0.81
SMG8-202ENST00000543872 IGKV2-40A0A087WW87 121 aaPredicted RBP9.97□□□□□ -0.81
SMG8-202ENST00000543872 IGKV2D-40P01614 121 aaPredicted RBP9.97□□□□□ -0.81
SMG8-202ENST00000543872 ORM1P02763 201 aa9.97□□□□□ -0.81
SMG8-202ENST00000543872 TNFAIP6P98066 277 aaPredicted RBP9.97□□□□□ -0.81
SMG8-202ENST00000543872 TMEM75Q8N9X5 138 aa9.97□□□□□ -0.81
SMG8-202ENST00000543872 Q8TAT8 98 aa9.97□□□□□ -0.81
SMG8-202ENST00000543872 SCNM1Q9BWG6 230 aa9.97□□□□□ -0.81
SMG8-202ENST00000543872 CACNA1GO43497 2377 aa9.97□□□□□ -0.81
SMG8-202ENST00000543872 PRTN3P24158 256 aa9.97□□□□□ -0.81
SMG8-202ENST00000543872 ZFAND6Q6FIF0 208 aa9.97□□□□□ -0.81
SMG8-202ENST00000543872 KALRNO60229 2985 aa9.96□□□□□ -0.81
SMG8-202ENST00000543872 IGLV2-23P01705 113 aa9.96□□□□□ -0.81
SMG8-202ENST00000543872 C9orf106Q8NAJ2 232 aa9.96□□□□□ -0.81
SMG8-202ENST00000543872 RPEQ96AT9 228 aa9.96□□□□□ -0.81
SMG8-202ENST00000543872 LOC400499M0QZD8 3231 aa9.96□□□□□ -0.82
SMG8-202ENST00000543872 DLX1P56177 255 aa9.96□□□□□ -0.82
SMG8-202ENST00000543872 SIGLEC15Q6ZMC9 328 aa9.96□□□□□ -0.82
SMG8-202ENST00000543872 HOXA3O43365 443 aaPredicted RBP9.95□□□□□ -0.82
SMG8-202ENST00000543872 TNFRSF6BO95407 300 aa9.95□□□□□ -0.82
SMG8-202ENST00000543872 EGR2P11161 476 aaPredicted RBP9.95□□□□□ -0.82
SMG8-202ENST00000543872 CCL8P80075 99 aa9.95□□□□□ -0.82
SMG8-202ENST00000543872 LPAL2Q16609 132 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms