RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 GPR183P32249 361 aa10.97□□□□□ -0.65
UBE3B-210ENST00000539599 GOLT1BQ9Y3E0 138 aa10.97□□□□□ -0.65
UBE3B-210ENST00000539599 IGHV7-81A0A0B4J1V7 117 aa10.96□□□□□ -0.65
UBE3B-210ENST00000539599 NPIPB5A8MRT5 1133 aa10.96□□□□□ -0.65
UBE3B-210ENST00000539599 G3V318 75 aa10.96□□□□□ -0.65
UBE3B-210ENST00000539599 HAX1O00165 279 aa10.96□□□□□ -0.65
UBE3B-210ENST00000539599 MFAP4P55083 255 aa10.96□□□□□ -0.65
UBE3B-210ENST00000539599 ERCC8Q13216 396 aa10.96□□□□□ -0.65
UBE3B-210ENST00000539599 C16orf54Q6UWD8 224 aa10.96□□□□□ -0.65
UBE3B-210ENST00000539599 UBTD1Q9HAC8 227 aa10.96□□□□□ -0.65
UBE3B-210ENST00000539599 ABCA2Q9BZC7 2435 aa10.96□□□□□ -0.65
UBE3B-210ENST00000539599 PRAC2D3DTV9 90 aa10.96□□□□□ -0.66
UBE3B-210ENST00000539599 SH2D1AO60880 128 aa10.96□□□□□ -0.66
UBE3B-210ENST00000539599 GAS8-AS1O95177 125 aa10.96□□□□□ -0.66
UBE3B-210ENST00000539599 CTSGP08311 255 aa10.96□□□□□ -0.66
UBE3B-210ENST00000539599 PPIFP30405 207 aaKnown RBP10.96□□□□□ -0.66
UBE3B-210ENST00000539599 CEACAM3P40198 252 aa10.96□□□□□ -0.66
UBE3B-210ENST00000539599 FBXL19-AS1Q494R0 122 aa10.96□□□□□ -0.66
UBE3B-210ENST00000539599 COL5A1-AS1Q5SY13 56 aa10.96□□□□□ -0.66
UBE3B-210ENST00000539599 DMRTA1Q5VZB9 504 aa10.96□□□□□ -0.66
UBE3B-210ENST00000539599 WFDC3Q8IUB2 231 aa10.96□□□□□ -0.66
UBE3B-210ENST00000539599 GFRA4Q9GZZ7 299 aa10.96□□□□□ -0.66
UBE3B-210ENST00000539599 IFI27P40305 119 aaPredicted RBP10.95□□□□□ -0.66
UBE3B-210ENST00000539599 ZNF562Q6V9R5 426 aa10.95□□□□□ -0.66
UBE3B-210ENST00000539599 RNF5Q99942 180 aa10.95□□□□□ -0.66
UBE3B-210ENST00000539599 MSRB1Q9NZV6 116 aa10.95□□□□□ -0.66
UBE3B-210ENST00000539599 D6R8Y8 96 aa10.95□□□□□ -0.66
UBE3B-210ENST00000539599 IGHG4P01861 327 aa10.95□□□□□ -0.66
UBE3B-210ENST00000539599 Q6ZQT7 251 aa10.95□□□□□ -0.66
UBE3B-210ENST00000539599 MSRB2Q9Y3D2 182 aa10.95□□□□□ -0.66
UBE3B-210ENST00000539599 CENPEQ02224 2701 aa10.95□□□□□ -0.66
UBE3B-210ENST00000539599 RELQ04864 619 aaPredicted RBP10.94□□□□□ -0.66
UBE3B-210ENST00000539599 NEU4Q8WWR8 484 aaPredicted RBP10.94□□□□□ -0.66
UBE3B-210ENST00000539599 TCF21O43680 179 aa10.94□□□□□ -0.66
UBE3B-210ENST00000539599 AAMDCQ9H7C9 122 aa10.94□□□□□ -0.66
UBE3B-210ENST00000539599 UQCRFS1P47985 274 aa10.94□□□□□ -0.66
UBE3B-210ENST00000539599 KLRB1Q12918 225 aa10.94□□□□□ -0.66
UBE3B-210ENST00000539599 TMEM219Q86XT9 240 aa10.94□□□□□ -0.66
UBE3B-210ENST00000539599 KLHDC1Q8N7A1 406 aa10.94□□□□□ -0.66
UBE3B-210ENST00000539599 Q8N9W7 124 aa10.94□□□□□ -0.66
UBE3B-210ENST00000539599 NDFIP1Q9BT67 221 aa10.94□□□□□ -0.66
UBE3B-210ENST00000539599 C15orf32Q32M92 178 aa10.93□□□□□ -0.66
UBE3B-210ENST00000539599 ZFP30Q9Y2G7 519 aa10.93□□□□□ -0.66
UBE3B-210ENST00000539599 K7EQM0 130 aa10.93□□□□□ -0.66
UBE3B-210ENST00000539599 M0R1W7 72 aa10.93□□□□□ -0.66
UBE3B-210ENST00000539599 ATP6V0E1O15342 81 aa10.93□□□□□ -0.66
UBE3B-210ENST00000539599 CT45A10P0DMU9 189 aa10.93□□□□□ -0.66
UBE3B-210ENST00000539599 MPV17L2Q567V2 206 aa10.93□□□□□ -0.66
UBE3B-210ENST00000539599 SOX21Q9Y651 276 aaPredicted RBP10.93□□□□□ -0.66
UBE3B-210ENST00000539599 TMEM189A5PLL7 270 aa10.92□□□□□ -0.66
UBE3B-210ENST00000539599 ZNF575Q86XF7 245 aa10.92□□□□□ -0.66
UBE3B-210ENST00000539599 TTC9CQ8N5M4 171 aa10.92□□□□□ -0.66
UBE3B-210ENST00000539599 Q8N6K4 173 aa10.92□□□□□ -0.66
UBE3B-210ENST00000539599 OR8A1Q8NGG7 326 aa10.92□□□□□ -0.66
UBE3B-210ENST00000539599 PRSS3P2Q8NHM4 247 aa10.92□□□□□ -0.66
UBE3B-210ENST00000539599 CHCHD1Q96BP2 118 aaKnown RBP10.92□□□□□ -0.66
UBE3B-210ENST00000539599 BPESC1Q9GZL8 116 aa10.92□□□□□ -0.66
UBE3B-210ENST00000539599 PKD1L2Q7Z442 2459 aa10.92□□□□□ -0.66
UBE3B-210ENST00000539599 A0A096LNJ9 63 aa10.92□□□□□ -0.66
UBE3B-210ENST00000539599 C19orf84I3L1E1 186 aa10.92□□□□□ -0.66
UBE3B-210ENST00000539599 CLEC3BP05452 202 aa10.92□□□□□ -0.66
UBE3B-210ENST00000539599 AJUBAQ96IF1 538 aa10.92□□□□□ -0.66
UBE3B-210ENST00000539599 COL25A1Q9BXS0 654 aaPredicted RBP10.92□□□□□ -0.66
UBE3B-210ENST00000539599 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.91□□□□□ -0.664e-6■■□□□ 13.5
UBE3B-210ENST00000539599 SAA4P35542 130 aa10.91□□□□□ -0.66
UBE3B-210ENST00000539599 RIGQ13278 110 aa10.91□□□□□ -0.66
UBE3B-210ENST00000539599 AP5S1Q9NUS5 200 aa10.91□□□□□ -0.66
UBE3B-210ENST00000539599 ZANQ9Y493 2812 aa10.91□□□□□ -0.66
UBE3B-210ENST00000539599 CLEC19AQ6UXS0 136 aa10.91□□□□□ -0.66
UBE3B-210ENST00000539599 PRR25Q96S07 402 aa10.91□□□□□ -0.66
UBE3B-210ENST00000539599 SRSF8Q9BRL6 282 aaKnown RBP10.91□□□□□ -0.66
UBE3B-210ENST00000539599 FAM231BA6NCW3 169 aa10.9□□□□□ -0.66
UBE3B-210ENST00000539599 SPRY2O43597 315 aa10.9□□□□□ -0.66
UBE3B-210ENST00000539599 PIP4P2Q8N4L2 257 aa10.9□□□□□ -0.66
UBE3B-210ENST00000539599 SIRPDQ9H106 197 aa10.9□□□□□ -0.66
UBE3B-210ENST00000539599 A0A087X0K7 114 aa10.9□□□□□ -0.66
UBE3B-210ENST00000539599 CSN1S1P47710 185 aa10.9□□□□□ -0.66
UBE3B-210ENST00000539599 RHOGP84095 191 aa10.9□□□□□ -0.66
UBE3B-210ENST00000539599 MAP1LC3CQ9BXW4 147 aa10.9□□□□□ -0.66
UBE3B-210ENST00000539599 SIGLEC8Q9NYZ4 499 aa10.9□□□□□ -0.66
UBE3B-210ENST00000539599 RABAC1Q9UI14 185 aa10.9□□□□□ -0.66
UBE3B-210ENST00000539599 CRXO43186 299 aaPredicted RBP10.89□□□□□ -0.67
UBE3B-210ENST00000539599 OR5AL1P0C617 328 aa10.89□□□□□ -0.67
UBE3B-210ENST00000539599 TWIST1Q15672 202 aa10.89□□□□□ -0.67
UBE3B-210ENST00000539599 FA2HQ7L5A8 372 aa10.89□□□□□ -0.67
UBE3B-210ENST00000539599 POLQO75417 2590 aa10.89□□□□□ -0.67
UBE3B-210ENST00000539599 CSPG4Q6UVK1 2322 aa10.89□□□□□ -0.67
UBE3B-210ENST00000539599 CCL25O15444 150 aa10.89□□□□□ -0.67
UBE3B-210ENST00000539599 ORM1P02763 201 aa10.89□□□□□ -0.67
UBE3B-210ENST00000539599 GATA1P15976 413 aaPredicted RBP10.89□□□□□ -0.67
UBE3B-210ENST00000539599 DEFB1P60022 68 aa10.89□□□□□ -0.67
UBE3B-210ENST00000539599 MRPL51Q4U2R6 128 aaKnown RBP10.89□□□□□ -0.67
UBE3B-210ENST00000539599 FAM162BQ5T6X4 162 aa10.89□□□□□ -0.67
UBE3B-210ENST00000539599 J3KRW8 73 aa10.88□□□□□ -0.67
UBE3B-210ENST00000539599 IL17RELQ6ZVW7 336 aa10.88□□□□□ -0.67
UBE3B-210ENST00000539599 LYPD1Q8N2G4 141 aa10.88□□□□□ -0.67
UBE3B-210ENST00000539599 TRAV30A0A087WSZ9 112 aa10.88□□□□□ -0.67
UBE3B-210ENST00000539599 NUDT3O95989 172 aa10.88□□□□□ -0.67
UBE3B-210ENST00000539599 NPYP01303 97 aa10.88□□□□□ -0.67
UBE3B-210ENST00000539599 EVI2AP22794 236 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms