RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 Q8N976 141 aa12.86□□□□□ -0.35
CLMAT3-201ENST00000510576 LOC102724200A0A096LPH7 203 aaPredicted RBP12.85□□□□□ -0.35
CLMAT3-201ENST00000510576 M0R2Z0 102 aa12.85□□□□□ -0.35
CLMAT3-201ENST00000510576 ATP5J2P56134 94 aa12.85□□□□□ -0.35
CLMAT3-201ENST00000510576 SAPCD1Q5SSQ6 148 aa12.85□□□□□ -0.35
CLMAT3-201ENST00000510576 BRD3OSQ6XYD6 125 aa12.85□□□□□ -0.35
CLMAT3-201ENST00000510576 ASH1LQ9NR48 2969 aaKnown RBP12.85□□□□□ -0.35
CLMAT3-201ENST00000510576 A0A1B0GW15 77 aa12.85□□□□□ -0.35
CLMAT3-201ENST00000510576 C3orf79P0CE67 100 aa12.85□□□□□ -0.35
CLMAT3-201ENST00000510576 RELQ04864 619 aaPredicted RBP12.85□□□□□ -0.35
CLMAT3-201ENST00000510576 C20orf144Q9BQM9 153 aa12.85□□□□□ -0.35
CLMAT3-201ENST00000510576 PAM16Q9Y3D7 125 aa12.85□□□□□ -0.35
CLMAT3-201ENST00000510576 A0A087X0K7 114 aa12.84□□□□□ -0.35
CLMAT3-201ENST00000510576 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.84□□□□□ -0.35
CLMAT3-201ENST00000510576 TRAV41A0A0B4J266 112 aa12.84□□□□□ -0.35
CLMAT3-201ENST00000510576 SH2D1AO60880 128 aa12.84□□□□□ -0.35
CLMAT3-201ENST00000510576 ARMS2P0C7Q2 107 aa12.84□□□□□ -0.35
CLMAT3-201ENST00000510576 TDRG1Q3Y452 100 aa12.84□□□□□ -0.35
CLMAT3-201ENST00000510576 NDFIP1Q9BT67 221 aa12.84□□□□□ -0.35
CLMAT3-201ENST00000510576 TMEM189A5PLL7 270 aa12.83□□□□□ -0.35
CLMAT3-201ENST00000510576 BUB3O43684 328 aa12.83□□□□□ -0.35
CLMAT3-201ENST00000510576 ATP5G2Q06055 141 aa12.83□□□□□ -0.35
CLMAT3-201ENST00000510576 LBHQ53QV2 105 aaPredicted RBP12.83□□□□□ -0.35
CLMAT3-201ENST00000510576 COX8CQ7Z4L0 72 aa12.83□□□□□ -0.35
CLMAT3-201ENST00000510576 PRR25Q96S07 402 aa12.83□□□□□ -0.35
CLMAT3-201ENST00000510576 MEGF9Q9H1U4 602 aa12.83□□□□□ -0.35
CLMAT3-201ENST00000510576 CSMD1Q96PZ7 3565 aa12.83□□□□□ -0.36
CLMAT3-201ENST00000510576 MYO18BQ8IUG5 2567 aa12.83□□□□□ -0.36
CLMAT3-201ENST00000510576 HLA-DMBP28068 263 aa12.83□□□□□ -0.36
CLMAT3-201ENST00000510576 CRIP2P52943 208 aaPredicted RBP12.83□□□□□ -0.36
CLMAT3-201ENST00000510576 IGFL4Q6B9Z1 124 aa12.83□□□□□ -0.36
CLMAT3-201ENST00000510576 GATD1Q8NB37 220 aa12.83□□□□□ -0.36
CLMAT3-201ENST00000510576 PIFOQ8TCI5 191 aa12.83□□□□□ -0.36
CLMAT3-201ENST00000510576 UBR5O95071 2799 aaPredicted RBP12.82□□□□□ -0.36
CLMAT3-201ENST00000510576 IGHV4-30-2A0A087WSY4 118 aa12.82□□□□□ -0.36
CLMAT3-201ENST00000510576 IGHG4P01861 327 aa12.82□□□□□ -0.36
CLMAT3-201ENST00000510576 CHCHD1Q96BP2 118 aaKnown RBP12.82□□□□□ -0.36
CLMAT3-201ENST00000510576 URB1-AS1Q96HZ7 61 aa12.82□□□□□ -0.36
CLMAT3-201ENST00000510576 TPPP3Q9BW30 176 aa12.82□□□□□ -0.36
CLMAT3-201ENST00000510576 CLPSL1A2RUU4 121 aa12.81□□□□□ -0.36
CLMAT3-201ENST00000510576 FAM181BA6NEQ2 426 aa12.81□□□□□ -0.36
CLMAT3-201ENST00000510576 FAM223BA6NKX1 122 aa12.81□□□□□ -0.36
CLMAT3-201ENST00000510576 C19orf54Q5BKX5 351 aa12.81□□□□□ -0.36
CLMAT3-201ENST00000510576 LCN12Q6JVE5 192 aa12.81□□□□□ -0.36
CLMAT3-201ENST00000510576 FAM223AQ8IWN6 122 aa12.81□□□□□ -0.36
CLMAT3-201ENST00000510576 METTL26Q96S19 204 aa12.81□□□□□ -0.36
CLMAT3-201ENST00000510576 VGLL1Q99990 258 aa12.81□□□□□ -0.36
CLMAT3-201ENST00000510576 IGHV4-38-2P0DP08 117 aa12.81□□□□□ -0.36
CLMAT3-201ENST00000510576 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.81□□□□□ -0.36
CLMAT3-201ENST00000510576 Q8TAT8 98 aa12.81□□□□□ -0.36
CLMAT3-201ENST00000510576 ATP6V0BQ99437 205 aa12.81□□□□□ -0.36
CLMAT3-201ENST00000510576 SLC50A1Q9BRV3 221 aa12.81□□□□□ -0.36
CLMAT3-201ENST00000510576 TMSB15BA0A087X1C1 80 aa12.8□□□□□ -0.36
CLMAT3-201ENST00000510576 IGHV3-66A0A0C4DH42 116 aa12.8□□□□□ -0.36
CLMAT3-201ENST00000510576 BMI1P35226 326 aa12.8□□□□□ -0.36
CLMAT3-201ENST00000510576 MIEN1Q9BRT3 115 aa12.8□□□□□ -0.36
CLMAT3-201ENST00000510576 C2orf88Q9BSF0 95 aa12.8□□□□□ -0.36
CLMAT3-201ENST00000510576 M0QZ24 198 aa12.8□□□□□ -0.36
CLMAT3-201ENST00000510576 MSMBP08118 114 aa12.8□□□□□ -0.36
CLMAT3-201ENST00000510576 RPS20P60866 119 aaKnown RBP12.8□□□□□ -0.36
CLMAT3-201ENST00000510576 LINC00527Q9UJ94 153 aa12.8□□□□□ -0.36
CLMAT3-201ENST00000510576 TRGV3P03979 118 aa12.79□□□□□ -0.36
CLMAT3-201ENST00000510576 LYZL1Q6UWQ5 148 aa12.79□□□□□ -0.36
CLMAT3-201ENST00000510576 ZNF705AQ6ZN79 300 aaPredicted RBP12.79□□□□□ -0.36
CLMAT3-201ENST00000510576 SPOCK3Q9BQ16 436 aa12.79□□□□□ -0.36
CLMAT3-201ENST00000510576 BTF3P20290 206 aaKnown RBP12.78□□□□□ -0.36
CLMAT3-201ENST00000510576 RAB4AP20338 218 aa12.78□□□□□ -0.36
CLMAT3-201ENST00000510576 LY6EQ16553 131 aa12.78□□□□□ -0.36
CLMAT3-201ENST00000510576 EBLN2Q6P2I7 272 aa12.78□□□□□ -0.36
CLMAT3-201ENST00000510576 USP9XQ93008 2570 aaPredicted RBP12.78□□□□□ -0.36
CLMAT3-201ENST00000510576 TENM4Q6N022 2769 aa12.78□□□□□ -0.36
CLMAT3-201ENST00000510576 RBAKDNA6NC62 111 aa12.78□□□□□ -0.36
CLMAT3-201ENST00000510576 EREGO14944 169 aa12.78□□□□□ -0.36
CLMAT3-201ENST00000510576 ZNF207O43670 478 aaKnown RBP12.78□□□□□ -0.36
CLMAT3-201ENST00000510576 LINC00614P0C842 121 aa12.78□□□□□ -0.36
CLMAT3-201ENST00000510576 RNF224P0DH78 156 aa12.78□□□□□ -0.36
CLMAT3-201ENST00000510576 SPATA45Q537H7 98 aa12.78□□□□□ -0.36
CLMAT3-201ENST00000510576 RNF182Q8N6D2 247 aa12.78□□□□□ -0.36
CLMAT3-201ENST00000510576 IGHV3OR16-13A0A075B7E8 117 aa12.77□□□□□ -0.37
CLMAT3-201ENST00000510576 IGHV3-74A0A0B4J1X5 117 aa12.77□□□□□ -0.37
CLMAT3-201ENST00000510576 IGHV1-24A0A0C4DH33 117 aa12.77□□□□□ -0.37
CLMAT3-201ENST00000510576 A0A1B0GV90 55 aa12.77□□□□□ -0.37
CLMAT3-201ENST00000510576 H3BUX3 64 aa12.77□□□□□ -0.37
CLMAT3-201ENST00000510576 ZNF80P51504 273 aaPredicted RBP12.77□□□□□ -0.37
CLMAT3-201ENST00000510576 PMCHL1Q16048 86 aa12.77□□□□□ -0.37
CLMAT3-201ENST00000510576 DMRTA1Q5VZB9 504 aa12.77□□□□□ -0.37
CLMAT3-201ENST00000510576 ZNF493Q6ZR52 646 aa12.77□□□□□ -0.37
CLMAT3-201ENST00000510576 IGHV3-49A0A0A0MS15 119 aa12.76□□□□□ -0.37
CLMAT3-201ENST00000510576 A6NDX4 124 aa12.76□□□□□ -0.37
CLMAT3-201ENST00000510576 C2orf70A6NJV1 201 aa12.76□□□□□ -0.37
CLMAT3-201ENST00000510576 PRAC2D3DTV9 90 aa12.76□□□□□ -0.37
CLMAT3-201ENST00000510576 M0R143 59 aa12.76□□□□□ -0.37
CLMAT3-201ENST00000510576 IGF1P05019 195 aa12.76□□□□□ -0.37
CLMAT3-201ENST00000510576 CTRLP40313 264 aa12.76□□□□□ -0.37
CLMAT3-201ENST00000510576 SRSF2Q01130 221 aaKnown RBP12.76□□□□□ -0.37
CLMAT3-201ENST00000510576 ERCC8Q13216 396 aa12.76□□□□□ -0.37
CLMAT3-201ENST00000510576 CYB5R2Q6BCY4 276 aa12.76□□□□□ -0.37
CLMAT3-201ENST00000510576 CLEC5AQ9NY25 188 aa12.76□□□□□ -0.37
CLMAT3-201ENST00000510576 U3KQE9 123 aa12.76□□□□□ -0.37
CLMAT3-201ENST00000510576 ARL3P36405 182 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms