RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 PSMB2P49721 201 aa10.38□□□□□ -0.75
GAPVD1-220ENST00000497580 APC2O95996 2303 aa10.38□□□□□ -0.75
GAPVD1-220ENST00000497580 GAS8-AS1O95177 125 aa10.37□□□□□ -0.75
GAPVD1-220ENST00000497580 POU2AF1Q16633 256 aa10.37□□□□□ -0.75
GAPVD1-220ENST00000497580 MAPKAPK5-AS1Q8N8E1 139 aa10.37□□□□□ -0.75
GAPVD1-220ENST00000497580 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.37□□□□□ -0.75
GAPVD1-220ENST00000497580 OR10X1Q8NGY0 326 aa10.37□□□□□ -0.75
GAPVD1-220ENST00000497580 OTORQ9NRC9 128 aa10.37□□□□□ -0.75
GAPVD1-220ENST00000497580 CEP295Q9C0D2 2601 aa10.37□□□□□ -0.75
GAPVD1-220ENST00000497580 DSCAMO60469 2012 aa10.37□□□□□ -0.75
GAPVD1-220ENST00000497580 A0A1W2PPI3 338 aa10.37□□□□□ -0.75
GAPVD1-220ENST00000497580 KLRC4-KLRK1H3BQV0 150 aa10.37□□□□□ -0.75
GAPVD1-220ENST00000497580 CCL3L1P16619 93 aa10.37□□□□□ -0.75
GAPVD1-220ENST00000497580 S4R3C0 116 aa10.37□□□□□ -0.75
GAPVD1-220ENST00000497580 CNIH1O95406 144 aa10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 GATA1P15976 413 aaPredicted RBP10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 XGP55808 180 aa10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 ZNF562Q6V9R5 426 aa10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 IGLV2-11P01706 119 aa10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 CRIP1P50238 77 aa10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 PGPEP1Q9NXJ5 209 aa10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 MSRB1Q9NZV6 116 aa10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 SPRR3Q9UBC9 169 aa10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 WI2-2373I1.2A0A1W2PRP0 233 aa10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 ATP5IP56385 69 aaPredicted RBP10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 ODF1Q14990 250 aa10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 KLF17Q5JT82 389 aaPredicted RBP10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 CFAP161Q6P656 301 aa10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 ZCCHC24Q8N2G6 241 aaKnown RBP10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 RAB9BQ9NP90 201 aa10.36□□□□□ -0.75
GAPVD1-220ENST00000497580 ZNF785A8K8V0 405 aa10.35□□□□□ -0.75
GAPVD1-220ENST00000497580 FOXI1Q12951 378 aa10.35□□□□□ -0.75
GAPVD1-220ENST00000497580 MAP1LC3AQ9H492 121 aa10.35□□□□□ -0.75
GAPVD1-220ENST00000497580 UFC1Q9Y3C8 167 aa10.35□□□□□ -0.75
GAPVD1-220ENST00000497580 DPM2O94777 84 aa10.35□□□□□ -0.75
GAPVD1-220ENST00000497580 SRSF6Q13247 344 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-220ENST00000497580 RRN3P1Q2M238 152 aa10.35□□□□□ -0.75
GAPVD1-220ENST00000497580 TMEM133Q9H2Q1 129 aa10.35□□□□□ -0.75
GAPVD1-220ENST00000497580 KLK15Q9H2R5 256 aa10.35□□□□□ -0.75
GAPVD1-220ENST00000497580 PRSS29PA6NIE9 313 aa10.35□□□□□ -0.75
GAPVD1-220ENST00000497580 TMEM158Q8WZ71 300 aa10.35□□□□□ -0.75
GAPVD1-220ENST00000497580 SLC25A39Q9BZJ4 359 aaPredicted RBP10.35□□□□□ -0.75
GAPVD1-220ENST00000497580 MRPL35Q9NZE8 188 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-220ENST00000497580 CGB1A6NKQ9 187 aa10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 MSMPQ1L6U9 139 aa10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 MAP1AP78559 2803 aaPredicted RBP10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 FAM90A27PA6NNH2 459 aa10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 M0R1B8 84 aa10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 TMEM75Q8N9X5 138 aa10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 THAP8Q8NA92 274 aa10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 C8orf46Q8TAG6 207 aa10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 Q8TAT8 98 aa10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 ZNF502Q8TBZ5 544 aa10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 NTN3O00634 580 aaPredicted RBP10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 Q6ZUT4 128 aa10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 RPEQ96AT9 228 aa10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 RITA1Q96K30 269 aa10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 HHLA3Q9XRX5 114 aa10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 COL6A6A6NMZ7 2263 aa10.34□□□□□ -0.75
GAPVD1-220ENST00000497580 CDIP1Q9H305 208 aa10.33□□□□□ -0.76
GAPVD1-220ENST00000497580 PRO3102Q9H379 93 aa10.33□□□□□ -0.76
GAPVD1-220ENST00000497580 ORM1P02763 201 aa10.33□□□□□ -0.76
GAPVD1-220ENST00000497580 IL4P05112 153 aa10.33□□□□□ -0.76
GAPVD1-220ENST00000497580 MZT1Q08AG7 82 aa10.33□□□□□ -0.76
GAPVD1-220ENST00000497580 HIGD1BQ9P298 99 aa10.33□□□□□ -0.76
GAPVD1-220ENST00000497580 COLQQ9Y215 455 aaPredicted RBP10.33□□□□□ -0.76
GAPVD1-220ENST00000497580 SH2D1AO60880 128 aa10.33□□□□□ -0.76
GAPVD1-220ENST00000497580 NFE4Q86UQ8 179 aa10.33□□□□□ -0.76
GAPVD1-220ENST00000497580 TM2D2Q9BX73 214 aa10.33□□□□□ -0.76
GAPVD1-220ENST00000497580 C1QTNF4Q9BXJ3 329 aa10.33□□□□□ -0.76
GAPVD1-220ENST00000497580 IGKV2-40A0A087WW87 121 aaPredicted RBP10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 A0A1B0GW15 77 aa10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 IGKV2D-40P01614 121 aaPredicted RBP10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 CGB3P0DN86 165 aa10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 CGB7P0DN87 165 aa10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 FHL3Q13643 280 aa10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 OR4C13Q8NGP0 309 aa10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 RASL11BQ9BPW5 248 aa10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 CSMD1Q96PZ7 3565 aa10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 LINC01548A6NM66 108 aa10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 IGFL4Q6B9Z1 124 aa10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 SPENQ96T58 3664 aaKnown RBP10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 NCBP2LA6PVI3 153 aaKnown RBP10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 OVOL3O00110 214 aa10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 DLX1P56177 255 aa10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 VMA21Q3ZAQ7 101 aa10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 SHISA2Q6UWI4 295 aa10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 LINC00312Q9Y6C7 94 aa10.32□□□□□ -0.76
GAPVD1-220ENST00000497580 TRBV20-1A0A075B6N2 111 aa10.31□□□□□ -0.76
GAPVD1-220ENST00000497580 PRO0461Q9UI25 63 aa10.31□□□□□ -0.76
GAPVD1-220ENST00000497580 LINC01549A6NIU2 74 aa10.31□□□□□ -0.76
GAPVD1-220ENST00000497580 TRGV9Q99603 122 aa10.31□□□□□ -0.76
GAPVD1-220ENST00000497580 KIR2DL4Q99706 377 aa10.31□□□□□ -0.76
GAPVD1-220ENST00000497580 HOXA3O43365 443 aaPredicted RBP10.31□□□□□ -0.76
GAPVD1-220ENST00000497580 Q6AWC8 147 aa10.31□□□□□ -0.76
GAPVD1-220ENST00000497580 SMIM20Q8N5G0 67 aa10.31□□□□□ -0.76
GAPVD1-220ENST00000497580 TMEM167AQ8TBQ9 72 aa10.31□□□□□ -0.76
GAPVD1-220ENST00000497580 NGBQ9NPG2 151 aa10.31□□□□□ -0.76
GAPVD1-220ENST00000497580 IGHV1-18A0A0C4DH31 117 aa10.3□□□□□ -0.76
GAPVD1-220ENST00000497580 CNTFRP26992 372 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms