RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 ZC2HC1BQ5TFG8 222 aa9.31□□□□□ -0.92
VTI1A-205ENST00000483122 SYT8Q8NBV8 401 aa9.31□□□□□ -0.92
VTI1A-205ENST00000483122 ABCA1O95477 2261 aa9.31□□□□□ -0.92
VTI1A-205ENST00000483122 A0A1W2PNU3 283 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-205ENST00000483122 KLRC4-KLRK1H3BQV0 150 aa9.31□□□□□ -0.92
VTI1A-205ENST00000483122 FOXC1Q12948 553 aa9.31□□□□□ -0.92
VTI1A-205ENST00000483122 IGF2-ASQ6U949 168 aa9.31□□□□□ -0.92
VTI1A-205ENST00000483122 TTC9CQ8N5M4 171 aa9.31□□□□□ -0.92
VTI1A-205ENST00000483122 ZNF418Q8TF45 676 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-205ENST00000483122 FOXC2Q99958 501 aa9.31□□□□□ -0.92
VTI1A-205ENST00000483122 LINC00574Q9H8X3 128 aa9.31□□□□□ -0.92
VTI1A-205ENST00000483122 TMEM14CQ9P0S9 112 aa9.31□□□□□ -0.92
VTI1A-205ENST00000483122 DSPP15924 2871 aaKnown RBP9.31□□□□□ -0.92
VTI1A-205ENST00000483122 CADP27708 2225 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 VSTM5A8MXK1 200 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 M0R3E3 92 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 APOMO95445 188 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 IGLV1-44P01699 117 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 SPINK8P0C7L1 97 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 EVI2AP22794 236 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 FHL3Q13643 280 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 RRN3P1Q2M238 152 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 LCNL1Q6ZST4 164 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 TMEM178AQ8NBL3 297 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 MDS2Q8NDY4 140 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 OR4C13Q8NGP0 309 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 TMEM133Q9H2Q1 129 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 ICE1Q9Y2F5 2266 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 TRBV19A0A075B6N1 114 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 CCL3L1P16619 93 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 FOXI1Q12951 378 aa9.3□□□□□ -0.92
VTI1A-205ENST00000483122 KLF17Q5JT82 389 aaPredicted RBP9.3□□□□□ -0.92
VTI1A-205ENST00000483122 PIEZO1Q92508 2521 aa9.29□□□□□ -0.92
VTI1A-205ENST00000483122 TMEM8BA6NDV4 472 aa9.29□□□□□ -0.92
VTI1A-205ENST00000483122 SHISA9B4DS77 424 aa9.29□□□□□ -0.92
VTI1A-205ENST00000483122 FCER1GP30273 86 aa9.29□□□□□ -0.92
VTI1A-205ENST00000483122 SRSF1Q07955 248 aaKnown RBP eCLIP9.29□□□□□ -0.92
VTI1A-205ENST00000483122 SIGLEC15Q6ZMC9 328 aa9.29□□□□□ -0.92
VTI1A-205ENST00000483122 FAM169BQ8N8A8 192 aa9.29□□□□□ -0.92
VTI1A-205ENST00000483122 RNF183Q96D59 192 aa9.29□□□□□ -0.92
VTI1A-205ENST00000483122 CNOT1A5YKK6 2376 aaKnown RBP9.29□□□□□ -0.92
VTI1A-205ENST00000483122 SH2D1AO60880 128 aa9.29□□□□□ -0.92
VTI1A-205ENST00000483122 TSPAN13O95857 204 aa9.29□□□□□ -0.92
VTI1A-205ENST00000483122 SMCPP49901 116 aaPredicted RBP9.29□□□□□ -0.92
VTI1A-205ENST00000483122 TWIST1Q15672 202 aa9.29□□□□□ -0.92
VTI1A-205ENST00000483122 TMEM160Q9NX00 188 aa9.29□□□□□ -0.92
VTI1A-205ENST00000483122 CYSLTR1Q9Y271 337 aa9.29□□□□□ -0.92
VTI1A-205ENST00000483122 INTS1Q8N201 2190 aaKnown RBP9.28□□□□□ -0.92
VTI1A-205ENST00000483122 TRAV40A0A0B4J280 105 aa9.28□□□□□ -0.92
VTI1A-205ENST00000483122 DPM2O94777 84 aa9.28□□□□□ -0.92
VTI1A-205ENST00000483122 PVRIGQ6DKI7 326 aa9.28□□□□□ -0.92
VTI1A-205ENST00000483122 GLMPQ8WWB7 406 aa9.28□□□□□ -0.92
VTI1A-205ENST00000483122 NGBQ9NPG2 151 aa9.28□□□□□ -0.92
VTI1A-205ENST00000483122 RNF7Q9UBF6 113 aa9.28□□□□□ -0.92
VTI1A-205ENST00000483122 C5orf64Q2M2E5 130 aa9.27□□□□□ -0.92
VTI1A-205ENST00000483122 NFE4Q86UQ8 179 aa9.27□□□□□ -0.92
VTI1A-205ENST00000483122 HIST1H4GQ99525 98 aa9.27□□□□□ -0.92
VTI1A-205ENST00000483122 MAP1LC3AQ9H492 121 aa9.27□□□□□ -0.92
VTI1A-205ENST00000483122 MSRB1Q9NZV6 116 aa9.27□□□□□ -0.92
VTI1A-205ENST00000483122 IGHV3-72A0A0B4J1Y9 119 aa9.27□□□□□ -0.93
VTI1A-205ENST00000483122 XGP55808 180 aa9.27□□□□□ -0.93
VTI1A-205ENST00000483122 KLRD1Q13241 179 aa9.27□□□□□ -0.93
VTI1A-205ENST00000483122 PSMG4Q5JS54 123 aa9.27□□□□□ -0.93
VTI1A-205ENST00000483122 RNF185Q96GF1 192 aa9.27□□□□□ -0.93
VTI1A-205ENST00000483122 SCNM1Q9BWG6 230 aa9.27□□□□□ -0.93
VTI1A-205ENST00000483122 C1QTNF4Q9BXJ3 329 aa9.27□□□□□ -0.93
VTI1A-205ENST00000483122 SS18L2Q9UHA2 77 aa9.27□□□□□ -0.93
VTI1A-205ENST00000483122 CFAP47Q6ZTR5 3102 aa9.27□□□□□ -0.93
VTI1A-205ENST00000483122 PRRC2CQ9Y520 2896 aaKnown RBP9.27□□□□□ -0.93
VTI1A-205ENST00000483122 GATA1P15976 413 aaPredicted RBP9.26□□□□□ -0.93
VTI1A-205ENST00000483122 VMA21Q3ZAQ7 101 aa9.26□□□□□ -0.93
VTI1A-205ENST00000483122 C9orf106Q8NAJ2 232 aa9.26□□□□□ -0.93
VTI1A-205ENST00000483122 TMEM158Q8WZ71 300 aa9.26□□□□□ -0.93
VTI1A-205ENST00000483122 SPRY4Q9C004 299 aa9.26□□□□□ -0.93
VTI1A-205ENST00000483122 MSRB2Q9Y3D2 182 aa9.26□□□□□ -0.93
VTI1A-205ENST00000483122 TRBV7-3A0A075B6L6 115 aa9.26□□□□□ -0.93
VTI1A-205ENST00000483122 ENSAO43768 121 aaKnown RBP9.26□□□□□ -0.93
VTI1A-205ENST00000483122 RBP4P02753 201 aa9.26□□□□□ -0.93
VTI1A-205ENST00000483122 CNTFRP26992 372 aa9.26□□□□□ -0.93
VTI1A-205ENST00000483122 TAL2Q16559 108 aa9.26□□□□□ -0.93
VTI1A-205ENST00000483122 MORN3Q6PF18 240 aaPredicted RBP9.26□□□□□ -0.93
VTI1A-205ENST00000483122 Q6ZUT4 128 aa9.26□□□□□ -0.93
VTI1A-205ENST00000483122 MRPL35Q9NZE8 188 aaKnown RBP9.26□□□□□ -0.93
VTI1A-205ENST00000483122 LINC01546A6NGU7 62 aa9.25□□□□□ -0.93
VTI1A-205ENST00000483122 EGR2P11161 476 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-205ENST00000483122 HLA-DRB4P13762 266 aa9.25□□□□□ -0.93
VTI1A-205ENST00000483122 RPL27AP46776 148 aaKnown RBP9.25□□□□□ -0.93
VTI1A-205ENST00000483122 TMEM30BQ3MIR4 351 aa9.25□□□□□ -0.93
VTI1A-205ENST00000483122 C1orf162Q8NEQ5 155 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-205ENST00000483122 DKK4Q9UBT3 224 aa9.25□□□□□ -0.93
VTI1A-205ENST00000483122 ERG28Q9UKR5 140 aa9.25□□□□□ -0.93
VTI1A-205ENST00000483122 HLA-DRB4X5D2U9 266 aa9.25□□□□□ -0.93
VTI1A-205ENST00000483122 ZFHX4Q86UP3 3567 aa9.25□□□□□ -0.93
VTI1A-205ENST00000483122 CFAP126Q5VTH2 177 aa9.25□□□□□ -0.93
VTI1A-205ENST00000483122 LINC01548A6NM66 108 aa9.24□□□□□ -0.93
VTI1A-205ENST00000483122 TNFRSF6BO95407 300 aa9.24□□□□□ -0.93
VTI1A-205ENST00000483122 THBDP07204 575 aa9.24□□□□□ -0.93
VTI1A-205ENST00000483122 SRSF6Q13247 344 aaKnown RBP9.24□□□□□ -0.93
VTI1A-205ENST00000483122 PTH2Q96A98 100 aa9.24□□□□□ -0.93
VTI1A-205ENST00000483122 SHANK2-AS3Q9BTD1 123 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms