RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 ANK2Q01484 3957 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 RIIAD1A6NNX1 92 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 G3V2T6 193 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 H7C1C5 153 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 PIAS1O75925 651 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 IFNA4P05014 189 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 OGNP20774 298 aaKnown RBP-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 LCN6P62502 163 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 ZNF56Q15929 161 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 GLYATL3Q5SZD4 288 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 LINC00269Q8N2A0 174 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 LINC00208Q96KT6 92 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 CST11Q9H112 138 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 NAT8BQ9UHF3 227 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 MGAMO43451 1857 aa-0.2□□□□□ -2.44
KDM1A-204ENST00000481879 DOPEY1Q5JWR5 2465 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 TRAV5A0A0B4J249 113 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 AIPO00170 330 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 HIST1H2BKO60814 126 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 CST7O76096 145 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 IFNA14P01570 189 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 IGHV3-30P01768 117 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 IFNA6P05013 189 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 HIST1H2BJP06899 126 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 IGHV3-30-5P0DP03 117 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 HBBP68871 147 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 REEP5Q00765 189 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 NEDD8Q15843 81 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 SCGB2B2Q4G0G5 96 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 AKR1C8PQ5T2L2 129 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 C1orf140Q5VVS0 124 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 PYCARDQ9ULZ3 195 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 FLNCQ14315 2725 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 PLXND1Q9Y4D7 1925 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 NEBP20929 6669 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 NCOR2Q9Y618 2525 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 MIA2Q96PC5 1412 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 ERBINQ96RT1 1412 aa-0.21□□□□□ -2.44
KDM1A-204ENST00000481879 HERC1Q15751 4861 aa-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 HYDINQ4G0P3 5121 aa-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 A0A1W2PRS3 328 aa-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 A6NN06 94 aa-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 SPINK1P00995 79 aa-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 PHBP35232 272 aa-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 POU6F1Q14863 301 aa-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 XAF1Q6GPH4 301 aa-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 C10orf99Q6UWK7 81 aa-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 PHF5AQ7RTV0 110 aaKnown RBP-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 C5orf17Q8NAS9 161 aa-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 GRPEL2Q8TAA5 225 aa-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 PLEKHB2Q96CS7 222 aa-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 SS18L2Q9UHA2 77 aa-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 SSR3Q9UNL2 185 aa-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 HRNRQ86YZ3 2850 aaPredicted RBP-0.22□□□□□ -2.44
KDM1A-204ENST00000481879 MT-ND6P03923 174 aa-0.23□□□□□ -2.45
KDM1A-204ENST00000481879 RPS3P23396 243 aaKnown RBP eCLIP-0.23□□□□□ -2.45
KDM1A-204ENST00000481879 CAPZBP47756 277 aa-0.23□□□□□ -2.45
KDM1A-204ENST00000481879 RPL37P61927 97 aaKnown RBP-0.23□□□□□ -2.45
KDM1A-204ENST00000481879 SPINK13Q1W4C9 94 aa-0.23□□□□□ -2.45
KDM1A-204ENST00000481879 CSAG1Q6PB30 78 aa-0.23□□□□□ -2.45
KDM1A-204ENST00000481879 ANGPTL5Q86XS5 388 aa-0.23□□□□□ -2.45
KDM1A-204ENST00000481879 CARD19Q96LW7 228 aa-0.23□□□□□ -2.45
KDM1A-204ENST00000481879 TPRKBQ9Y3C4 175 aa-0.23□□□□□ -2.45
KDM1A-204ENST00000481879 IGF2RP11717 2491 aa-0.23□□□□□ -2.45
KDM1A-204ENST00000481879 STAB1Q9NY15 2570 aa-0.23□□□□□ -2.45
KDM1A-204ENST00000481879 CHD3Q12873 2000 aaKnown RBP-0.23□□□□□ -2.45
KDM1A-204ENST00000481879 C3orf85A0A1B0GTC6 90 aa-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 PRORSD1PA6NEY8 169 aa-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 HSD11B1P28845 292 aa-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 PPP1R2P41236 205 aa-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 SNRPD3P62318 126 aaKnown RBP-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 MRPS25P82663 173 aaKnown RBP-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 FADDQ13158 208 aa-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 HACD4Q5VWC8 232 aa-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 CEP19Q96LK0 163 aa-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 OR4C12Q96R67 309 aa-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 EFCAB11Q9BUY7 163 aa-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 PBDC1Q9BVG4 233 aa-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 LPAR5Q9H1C0 372 aa-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 SH3BGRL3Q9H299 93 aa-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 TAF9BQ9HBM6 251 aa-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 OTORQ9NRC9 128 aa-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 SETXQ7Z333 2677 aaKnown RBP-0.24□□□□□ -2.45
KDM1A-204ENST00000481879 MYH10P35580 1976 aa-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 SPTBP11277 2137 aa-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 ABCA12Q86UK0 2595 aa-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 LOC101927531A0A1B0GV80 90 aa-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 ATP5HO75947 161 aa-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 APOA2P02652 100 aa-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 GYPBP06028 91 aa-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 EVI2AP22794 236 aa-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 MRPS36P82909 103 aaKnown RBP-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 LTC4SQ16873 150 aa-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 RTL8BQ17RB0 113 aa-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 Q5BKY6 102 aa-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 FKBP1CQ5VVH2 108 aa-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 DHRS4L2Q6PKH6 230 aa-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 RTL8AQ9BWD3 113 aa-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 PROK2Q9HC23 129 aa-0.25□□□□□ -2.45
KDM1A-204ENST00000481879 LYRM2Q9NU23 88 aaPredicted RBP-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms