RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 SYNMO15061 1565 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 HRNRQ86YZ3 2850 aaPredicted RBP0.5□□□□□ -2.33
CALD1-219ENST00000480638 EEA1Q15075 1411 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 PPIP5K1Q6PFW1 1433 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 EIF3AQ14152 1382 aaKnown RBP0.5□□□□□ -2.33
CALD1-219ENST00000480638 TRAV1-1A0A0B4J248 108 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 C2orf70A6NJV1 201 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 HYPMO75409 117 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 PIAS1O75925 651 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 ASAH2BP0C7U1 165 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 CASP1P29466 404 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 ERP29P30040 261 aaKnown RBP0.5□□□□□ -2.33
CALD1-219ENST00000480638 S100A5P33763 92 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 PIGPP57054 158 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 GNG5P63218 68 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 PDE6HQ13956 83 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 KHDC3LQ587J8 217 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 SBSPONQ8IVN8 264 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 HIST3H2BBQ8N257 126 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 SMIM20Q8N5G0 67 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 OR8D4Q8NGM9 314 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 OR13D1Q8NGV5 346 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 GNPDA2Q8TDQ7 276 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 ZNF418Q8TF45 676 aaPredicted RBP0.5□□□□□ -2.33
CALD1-219ENST00000480638 GPR146Q96CH1 333 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 SLAMF6Q96DU3 332 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 BTF3L4Q96K17 158 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 C2orf50Q96LR7 162 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 OSTCQ9NRP0 149 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 TVP23BQ9NYZ1 205 aa0.5□□□□□ -2.33
CALD1-219ENST00000480638 UTP11Q9Y3A2 253 aaKnown RBP0.5□□□□□ -2.33
CALD1-219ENST00000480638 KIAA0100Q14667 2235 aaKnown RBP0.5□□□□□ -2.33
CALD1-219ENST00000480638 ANK3Q12955 4377 aaKnown RBP0.5□□□□□ -2.33
CALD1-219ENST00000480638 TNRC6CQ9HCJ0 1690 aaKnown RBP0.49□□□□□ -2.33
CALD1-219ENST00000480638 TARBP1Q13395 1621 aaKnown RBP0.49□□□□□ -2.33
CALD1-219ENST00000480638 SHROOM2Q13796 1616 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 USP32Q8NFA0 1604 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 PEG3Q9GZU2 1588 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 ACACAQ13085 2346 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 MED13LQ71F56 2210 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 CFTRP13569 1480 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 LRRC9Q6ZRR7 1453 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 RTL1A6NKG5 1358 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 TNRC6AQ8NDV7 1962 aaKnown RBP0.49□□□□□ -2.33
CALD1-219ENST00000480638 DNAH10Q8IVF4 4471 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 TRBV19A0A075B6N1 114 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 TRAV3A0A0B4J244 114 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 B4DSR2 109 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 M0R378 163 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 HMGB3O15347 200 aaKnown RBP0.49□□□□□ -2.33
CALD1-219ENST00000480638 MFSD11O43934 449 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 OR1I1O60431 355 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 OR4E1P0C645 316 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 INSL3P51460 131 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 CRYBA4P53673 196 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 TAS2R41P59536 307 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 NCALDP61601 193 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 RHOBP62745 196 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 RPL19P84098 196 aaKnown RBP0.49□□□□□ -2.33
CALD1-219ENST00000480638 KRR1Q13601 381 aaKnown RBP0.49□□□□□ -2.33
CALD1-219ENST00000480638 RHEBQ15382 184 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 RRN3P1Q2M238 152 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 DEFB113Q30KQ7 82 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 RNASE10Q5GAN6 216 aaKnown RBP0.49□□□□□ -2.33
CALD1-219ENST00000480638 Q8IYB0 196 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 Q8N6K4 173 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 OR10J5Q8NHC4 309 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 PRRT1Q99946 306 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 PAIP2Q9BPZ3 127 aaKnown RBP0.49□□□□□ -2.33
CALD1-219ENST00000480638 GINS3Q9BRX5 216 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 TMEM126AQ9H061 195 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 RNF122Q9H9V4 155 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 GID8Q9NWU2 228 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 IL20Q9NYY1 176 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 PRNDQ9UKY0 176 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 KIDINS220Q9ULH0 1771 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 ADAMTS12P58397 1594 aa0.49□□□□□ -2.33
CALD1-219ENST00000480638 A2MP01023 1474 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 MLH3Q9UHC1 1453 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 LYSTQ99698 3801 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 CADP27708 2225 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 HUWE1Q7Z6Z7 4374 aaKnown RBP0.48□□□□□ -2.33
CALD1-219ENST00000480638 TJP1Q07157 1748 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 TNS1Q9HBL0 1735 aaKnown RBP0.48□□□□□ -2.33
CALD1-219ENST00000480638 UNC13AQ9UPW8 1703 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 MARF1Q9Y4F3 1742 aaKnown RBP0.48□□□□□ -2.33
CALD1-219ENST00000480638 A0A087X0T9 212 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 A0A0D9SG52 128 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 J3QRK9 145 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 TMEM256-PLSCR3K7ERE1 68 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 TAX1BP3O14907 124 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 CYB5BO43169 146 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 SULT1B1O43704 296 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 ATG12O94817 140 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 IFNA1P01562 189 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 MGST1P10620 155 aaKnown RBP0.48□□□□□ -2.33
CALD1-219ENST00000480638 COX6A1P12074 109 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 MIFP14174 115 aa0.48□□□□□ -2.33
CALD1-219ENST00000480638 S100A4P26447 101 aaKnown RBP0.48□□□□□ -2.33
CALD1-219ENST00000480638 SSR2P43308 183 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms